Cinclus cinclus (white-throated dipper): 134049996
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Entry
134049996 CDS
T10813
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccic04121
]
134049996 (RLIM)
Enzymes [BR:
ccic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134049996 (RLIM)
Ubiquitin system [BR:
ccic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134049996 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
134049996
NCBI-ProteinID:
XP_062358774
LinkDB
All DBs
Position
15:complement(2041352..2055984)
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AA seq
593 aa
AA seq
DB search
MESSDSGDKGSIDQSEAQRQSQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
EEELLRRLHQVKEGPPQQNSDENRGAESTEDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQ
SWRAVSRTNPNSGDFRFSLEINVNRNNGNTNAETENEPSVEPSNGEDLENSQSDSEIPRS
ESPSVRQPGSERSSAEELMAEEASPPRGQRRARSRSPEQRRTRARTDRSRSPINAVSEAP
RRSHHNTSSQTLDHSSAGEAEGSSRTRQHVTLRQHTVGTEVPSENAVLFSPPETRPAPQA
AGSSETTGTSESTAPGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRSRSQTPNNTVTYE
SERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELS
YFMYSDSDADPSGPAPSQNVETSEPQSGGTSGNEGADVSSGEVYEGGHEASSTSGARREG
RNMRGSVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAMRNFGESDALKTCS
VCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRESVV
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggaaagctcagattctggtgataaaggaagtattgatcaatcagaagcccaacgtcag
agccagctggatcggttagatcgagaagaagctttctatcagtttgtgaacaacctgagt
gaagaggactacaggcttatgagagataacaatttgctaggaacaccaggtgaaattact
gaagaagagttgctgagaaggctacaccaagttaaagaaggtccgccacagcaaaacagt
gatgagaatagaggtgcagagtccacagaagatgtttcaaatggagattctataatagac
tggcttaattcagtccgacagactggaaatacaacgcgaagtgggcagcgaggaaaccag
tcctggagagcagtgagccggactaacccaaatagtggcgacttcagattcagtttggaa
ataaatgtcaaccgtaataatgggaacacgaatgcagaaactgagaatgagccatctgta
gagccttccaacggggaggatttggagaacagccaaagtgactctgaaattccaaggtct
gaatcaccgtctgtaaggcagcctggatcggaaaggagcagtgcagaggagctgatggct
gaggaggcttcccctcctagagggcagaggagagccaggagtaggagtccggagcagcgg
cggacgcgggctaggactgatagaagtaggtcacctattaatgcagtgagtgaggcccct
cgcaggtctcatcacaacacatcatctcaaacacttgaccactcctcagcgggcgaggct
gagggcagctctagaaccaggcagcacgtgacgttaaggcagcacacggtggggactgag
gtgccaagcgaaaatgcagttctgttctccccccctgaaacgaggcctgctccccaagca
gcaggttcttcagaaaccaccggcaccagtgagtccacagctcctgggcagaggcctccc
accatagtgctggacctgcaggtgagaagagttcggccgggcgagtaccggcagagggac
agcatagccaacaggacccggtcccgatcccagacccccaacaacacggtcacctacgag
agcgagcgcggaggcttccggcgcacgttctcccgctcggagcgggccggggtgagaact
tacgtcagcaccatcaggattcctatccgtaggatcttaaacacgggcctgagcgagacc
acatcagtcgccatccagaccatgctgaggcagatcatgacgggcttcggggagctcagc
tacttcatgtacagcgatagcgatgccgatcccagcgggccggctcccagccagaacgtg
gagacttctgagccgcagagcggaggcacctcgggcaatgagggtgcagatgttagctca
ggggaggtgtacgagggagggcacgaggctagctcaacatctggtgccaggcgggaaggc
cggaatatgaggggatcggtcacttttgaagaaagcggttctctaccgttccttagcctt
gcacaatttttcctactcaacgaagacgacgacgaccaaccaagaggactcaccaaagaa
caaattgacaacctagccatgaggaattttggtgagagcgacgctctgaaaacctgcagc
gtgtgcatcacagagtacacggagggcaacaagctccgcaagctgccgtgctcgcacgag
taccacgtgcactgcatcgaccgctggctgtcggagaactccacctgccccatctgccgc
agagcagtcttagcttctgggaacagagagagcgttgtctga
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