Cinclus cinclus (white-throated dipper): 134050015
Help
Entry
134050015 CDS
T10813
Symbol
PCDH19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccic04515
]
134050015 (PCDH19)
Cell adhesion molecules [BR:
ccic04515
]
Cadherins
Protocadherins
134050015 (PCDH19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Motif
Other DBs
NCBI-GeneID:
134050015
NCBI-ProteinID:
XP_062358798
LinkDB
All DBs
Position
15:complement(18692855..18746050)
Genome browser
AA seq
1093 aa
AA seq
DB search
MGALPALLGAALLWAGAGALVNLKYSVEEEQRAGTVIANVAKDARDAGFVLDPRQPAAFR
VVSNSAPHLVDISPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDL
NDNAPSFPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYEITPNDLFGLETKTRG
DGSRFAELVVEKSLDRETQSHYSYVITALDGGDPPNFGTVELSIRVIDSNDNNPLFEEPA
YTVSVPENAPPGTPVIRLNASDPDEGTNGQVLYSFHSYVSERARELFQIDPQSGLITVSG
AIDYEEGHVYELDVQAKDLGPNSIPAHCKVTISVQDANDNPPLINLLSVNSELVEVSENA
PLGYVIALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLT
IQARDNGIPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDL
GLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPS
LQSNATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGR
LSYEMVEGDRGFFEIDQVNGEIRTTRAFGENAKTAYELIVVAHDHGKTSLSASALILIYL
SPALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSY
GHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSE
STFLNVESQNSRNAGSNHIYHHTFTGQSPQQPDLIINGMPLPETENYSFDSNYVNSRAHL
IKSSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDVLNTSVPSMGSQGPEQ
EQSEGFHCREECRILGHSDRCWMPRGAVPSRAKSPEHGRNVIALSIEATAVDAEPYADCS
TKRTFATFGKEGGEPPAEERLANPKAKRTVDSAACSPKVSGAVREAGNGCEAVSPVTSPL
HLKSPLAGKPAAPYGAGHCREREPFGNSGPSRPTEAEPRGADSESGGQEGNPLLQERREK
DSPNARRLKDIVL
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgggggctctcccggcgctgctcggggccgctttgctttgggccggcgccggggccctc
gtcaacctcaagtactcggtggaggaggagcagcgggccggcacggtgatcgccaacgtc
gccaaggacgcccgggacgccggtttcgtgctggacccccggcagcccgccgccttccgg
gtggtctccaactcggccccccacttggtggacatcagccccgggtccgggctgctggtg
accaagcagaaaatcgacagggacctgctatgccggcagagccccaagtgtgtaatctcg
ctggaggtgatgtccagctccatggagatctgcgtgatcaagctggagatcaaggacctg
aacgacaacgcacccagctttcccaccgaccaaatcgagctggagatctcagagacagcc
agccctggcacccgggtgccactggagagtgcctatgacccggactcgggcagctttggt
gtgcagagctatgagatcacccccaatgacctctttgggctggagaccaagacacggggt
gacgggtcccgttttgctgagctggtggtggagaagagcctggaccgtgagacgcagtcc
cactacagctatgtgatcacggcgctggatggtggtgacccgcccaactttggcacggtg
gagctcagcatccgtgtcattgactccaatgacaacaacccgctctttgaggaaccagcc
tacaccgtcagcgtgcctgaaaatgctcctccggggacaccggtcatccgcctcaatgcc
tctgacccggacgagggcaccaacggccaggtcctctactccttccacagctacgtctct
gagcgggcccgggagctcttccaaatcgacccccagagcggcctcatcacggtgagcggt
gccattgactatgaggagggtcatgtctacgagctggatgtgcaggccaaggacttgggg
cctaactccatccccgcccattgcaaagtgaccattagtgtccaggatgccaacgacaac
ccgcccctcatcaacctgctctctgttaacagcgagctggtggaggtgagcgagaacgcc
ccgctggggtacgtcatcgccctggtgcgtgtctcggatcgcgactccggggccaacggg
cgcgtgcagtgcaagctcctgggcaatgtgccttttcgactccaggagtatgagagcttc
tccaccatcctggtggatgggcggctggaccgggagcagagggaccagtacaacctcacc
atccaggctagggataatggcatcccttccctgcaggccaccaaatccttcaccgtcaag
atcaccgatgagaatgacaaccatccccacttctccaagccttattaccaagtcatcgtg
caggagaataacaccccaggggcctacctcctctcggtgtcagccagggaccctgacctg
ggcctcaatggcagcgtgtcctaccagattgttccctcccaggtcagggacatgcctgtt
ttcacctatgtctccatcaatcccaactctggagatatctatgctttgaggtccttcaat
catgaacagacaaaggcctttgagttcaaggtcttggcaaaagatgggggtaatccctct
ctgcagagcaatgccacagtcagggtgatcgtcctggatgtcaatgacaacacgccggtg
atcacggccccgccgctggtcaatgggacggcggaggtgtacatccccaggaacgcgggg
gttggctacttggtgacagtggtcaaggcagatgactatgatgagggtgaaaatggcaga
ctttcctatgaaatggtggaaggtgacagaggattttttgagatcgaccaggtcaatgga
gagataaggaccaccagagcctttggggagaacgccaaaacagcctatgagctcatcgtg
gtggctcatgaccatgggaaaacctctctctcggcttctgccttgattttgatatacctg
tctccagccctggatgcccaggaatccataggatctgttaacctctccttgattttcatt
attgccctggggtctattgcagccattctttttgtcaccatgatctttgtggcagtcaag
tgcaaaagggataacaaggaaatcaggacctacaactgcagaattgcggagtactcctat
ggacatcagaagaaatcaagcaagaagaagaagatcagcaagaacgatatccgcctggtg
ccgcgggacgtggaggagacggacaaaatgaacgttgtgagctgctcctctctcacttcc
tccctcaactacttcgactaccaccagcagaccctgccgctgggctgccgccgctccgag
agcaccttcctcaacgtggagagccagaacagcaggaacgccggctccaaccacatctac
caccacaccttcacgggacagagcccccagcagcccgacctcatcatcaacggcatgcca
ctgccagagactgaaaactactcctttgattccaactacgtgaacagcagagctcattta
ataaaaagcagctccacgttcaaggacttggaggggaacagtctgaaggacagtggccat
gaggagagtgaccagacagacagcgagcatgacgtgcagaggggcctctactgcgacacg
gccgtcaacgacgtgctgaacaccagcgtcccctccatggggtcccagggccccgagcaa
gagcagagcgagggcttccactgccgggaggagtgccgcatcctgggccactcggacaga
tgctggatgccccgcggcgccgtgcccagccgggccaagtcccccgagcacggcaggaac
gtcatcgccctgtccatcgaggccacggcggtggatgcagagccttacgcagactgcagc
acaaaaaggaccttcgccaccttcggcaaggagggcggcgagcccccggccgaggagcgg
ctcgccaaccccaaggccaaaagaacggtggactcggccgcctgcagccccaaggtgagc
ggcgccgtgcgcgaggccggcaatggctgcgaggccgtcagccccgtcacctcgccccta
cacctgaagagccccttggccggcaagccggcggcgccctacggtgccgggcactgccgg
gaacgggagccctttgggaacagtggcccttcccggcccaccgaggcagagccccggggc
gcggacagcgagagcggcgggcaggagggtaacccgctcctgcaggaacgccgcgaaaag
gactcgcccaacgcccggagactaaaggacatcgtcctctga
DBGET
integrated database retrieval system
