KEGG   Cinclus cinclus (white-throated dipper): 134050057
Entry
134050057         CDS       T10813                                 
Name
(RefSeq) nuclear pore glycoprotein p62-like
  KO
K14306  nuclear pore complex protein Nup62
Organism
ccic  Cinclus cinclus (white-throated dipper)
Pathway
ccic03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ccic00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    134050057
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccic03019]
    134050057
Messenger RNA biogenesis [BR:ccic03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     134050057
SSDB
Motif
Pfam: Nsp1_C DUF4164 Nup188_C GAS
Other DBs
NCBI-GeneID: 134050057
NCBI-ProteinID: XP_062358867
LinkDB
Position
15:3619169..3625235
AA seq 585 aa
MNQFSFGTAAPGGAFSLGAPRAAATTTAPTSGFSFSAPAPAAASGGFSFGSAAAPAAGGS
QPAGLFSFSRPGAAAQPSGFSFGSGSGSAGAAPAAPAAAAFPLGANTPKVNFGASTATSA
PAITGGFSFGAPAATSTPSSQAAAPSGFTFGSAGTSSTSTAPSGTTGGFTFSSGTTTQAG
TAGFSIGTAAPQATSAGLTFGTAPAAAATTSTATLGAATPSAAPFSLGGQPTGLTFGAPP
STAATSTTTATLTTGASQAPTLSFATKLGVTSTAATTASTTSTTSVLGSTGPSLFASVAT
SSAPASSTTTGLSLGATSTGSTGTASLGTLGFGIKVPGTTAATTSTATGTTTSASGFPLN
LKPLTTTGAIGAVTSTAAITTTTTPSAPPVMTYAQLESLINKWSLELEDQEKHFLHQATQ
VNAWDRMLIENGEKITSLHREVEKVKVDQKRLDQELDFILSQQKELEDLLTPLEESVKEQ
SGTIYLQHADEERERTYKLAENIDAQLKRMAQDLKDITEHLNTSRGPADTSDPLQQICKI
LNAHMDSLQWIDQNSAVLQRKVEEVTKVCESRRKEQERSFRITFD
NT seq 1758 nt   +upstreamnt  +downstreamnt
atgaaccagttcagcttcgggacggccgcgcccggcggcgccttcagcctgggcgcgccc
agagccgccgccaccaccacggcgcccaccagcggcttctccttctccgcgcccgcgccc
gccgccgcctccggcggcttcagcttcggcagcgcggcggcgccggcggcgggcggcagc
cagcccgccgggctcttctccttcagcaggccgggcgcggccgcgcagccttccggcttc
agcttcggctccggctccggctcggccggcgcggcccccgcggccccggcagccgccgcc
ttcccgctgggggcaaacaccccaaaagtgaactttggagccagcactgccacttcagct
cctgcaatcacggggggcttttcttttggtgcccctgctgcaaccagcacaccctcgagt
caggcagcggccccgtctggctttacctttggctctgctggcaccagcagcaccagcaca
gctccgtctgggactacaggagggttcaccttctccagtggcaccacgacccaggcggga
acagccggcttcagcatcggcaccgcggctccgcaggcgacgtccgcagggctgaccttt
ggcacggcccctgcggctgctgccaccaccagcacggccaccctgggagctgccaccccg
tcagcagcgcccttcagccttggggggcagcccacaggtctaacctttggggcaccgcct
tcaacagcagccaccagtacaaccacggcaacgctgaccacaggtgccagccaggcaccc
actctgtcctttgcaaccaagcttggagtcacatccacagctgccaccacggcctccacc
accagcaccacctcagtgctgggctccacggggccctccttgtttgcatctgtggccact
tcttcagccccagcctcctccaccaccacgggcctctcacttggtgccacttccactggt
tccactgggacagccagtctggggacacttggctttggaataaaagttcctggaacaaca
gctgccacaacaagcacagccactgggactactacttctgcttctggctttcctttgaat
ctgaagccattgactacaactggtgccattggagctgtgacctccacagctgccataacc
acaaccaccacacccagtgcccccccagtgatgacttatgcccagctggagagtttgata
aacaagtggagcctagaactggaagaccaggagaagcactttctccatcaagctacacaa
gtcaatgcctgggaccggatgctgatagagaatggcgagaagattacttcgttacacaga
gaagtagagaaggtgaaggttgatcagaagagactggatcaggagctggacttcattctg
tcccagcagaaagagctggaggacttgctgacccctctggaggagtctgtgaaggagcag
agcgggaccatctacctgcagcacgcggatgaggaacgggagaggacctacaaactggct
gagaacattgatgctcagctgaagcgcatggcacaagatctgaaggacatcactgagcac
ttgaacacatcaagaggcccagcagacacgagtgacccgcttcaacagatctgtaaaatt
ttgaatgcacacatggattccctgcagtggattgaccagaactcggctgtgctgcagaga
aaagtggaagaggtgacaaaggtttgtgagagtcgccgcaaggagcaggagcgcagcttt
cggatcacctttgattga

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