Cinclus cinclus (white-throated dipper): 134050057
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Entry
134050057 CDS
T10813
Name
(RefSeq) nuclear pore glycoprotein p62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134050057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccic03019
]
134050057
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134050057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
Nup188_C
GAS
Motif
Other DBs
NCBI-GeneID:
134050057
NCBI-ProteinID:
XP_062358867
LinkDB
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Position
15:3619169..3625235
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AA seq
585 aa
AA seq
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MNQFSFGTAAPGGAFSLGAPRAAATTTAPTSGFSFSAPAPAAASGGFSFGSAAAPAAGGS
QPAGLFSFSRPGAAAQPSGFSFGSGSGSAGAAPAAPAAAAFPLGANTPKVNFGASTATSA
PAITGGFSFGAPAATSTPSSQAAAPSGFTFGSAGTSSTSTAPSGTTGGFTFSSGTTTQAG
TAGFSIGTAAPQATSAGLTFGTAPAAAATTSTATLGAATPSAAPFSLGGQPTGLTFGAPP
STAATSTTTATLTTGASQAPTLSFATKLGVTSTAATTASTTSTTSVLGSTGPSLFASVAT
SSAPASSTTTGLSLGATSTGSTGTASLGTLGFGIKVPGTTAATTSTATGTTTSASGFPLN
LKPLTTTGAIGAVTSTAAITTTTTPSAPPVMTYAQLESLINKWSLELEDQEKHFLHQATQ
VNAWDRMLIENGEKITSLHREVEKVKVDQKRLDQELDFILSQQKELEDLLTPLEESVKEQ
SGTIYLQHADEERERTYKLAENIDAQLKRMAQDLKDITEHLNTSRGPADTSDPLQQICKI
LNAHMDSLQWIDQNSAVLQRKVEEVTKVCESRRKEQERSFRITFD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagttcagcttcgggacggccgcgcccggcggcgccttcagcctgggcgcgccc
agagccgccgccaccaccacggcgcccaccagcggcttctccttctccgcgcccgcgccc
gccgccgcctccggcggcttcagcttcggcagcgcggcggcgccggcggcgggcggcagc
cagcccgccgggctcttctccttcagcaggccgggcgcggccgcgcagccttccggcttc
agcttcggctccggctccggctcggccggcgcggcccccgcggccccggcagccgccgcc
ttcccgctgggggcaaacaccccaaaagtgaactttggagccagcactgccacttcagct
cctgcaatcacggggggcttttcttttggtgcccctgctgcaaccagcacaccctcgagt
caggcagcggccccgtctggctttacctttggctctgctggcaccagcagcaccagcaca
gctccgtctgggactacaggagggttcaccttctccagtggcaccacgacccaggcggga
acagccggcttcagcatcggcaccgcggctccgcaggcgacgtccgcagggctgaccttt
ggcacggcccctgcggctgctgccaccaccagcacggccaccctgggagctgccaccccg
tcagcagcgcccttcagccttggggggcagcccacaggtctaacctttggggcaccgcct
tcaacagcagccaccagtacaaccacggcaacgctgaccacaggtgccagccaggcaccc
actctgtcctttgcaaccaagcttggagtcacatccacagctgccaccacggcctccacc
accagcaccacctcagtgctgggctccacggggccctccttgtttgcatctgtggccact
tcttcagccccagcctcctccaccaccacgggcctctcacttggtgccacttccactggt
tccactgggacagccagtctggggacacttggctttggaataaaagttcctggaacaaca
gctgccacaacaagcacagccactgggactactacttctgcttctggctttcctttgaat
ctgaagccattgactacaactggtgccattggagctgtgacctccacagctgccataacc
acaaccaccacacccagtgcccccccagtgatgacttatgcccagctggagagtttgata
aacaagtggagcctagaactggaagaccaggagaagcactttctccatcaagctacacaa
gtcaatgcctgggaccggatgctgatagagaatggcgagaagattacttcgttacacaga
gaagtagagaaggtgaaggttgatcagaagagactggatcaggagctggacttcattctg
tcccagcagaaagagctggaggacttgctgacccctctggaggagtctgtgaaggagcag
agcgggaccatctacctgcagcacgcggatgaggaacgggagaggacctacaaactggct
gagaacattgatgctcagctgaagcgcatggcacaagatctgaaggacatcactgagcac
ttgaacacatcaagaggcccagcagacacgagtgacccgcttcaacagatctgtaaaatt
ttgaatgcacacatggattccctgcagtggattgaccagaactcggctgtgctgcagaga
aaagtggaagaggtgacaaaggtttgtgagagtcgccgcaaggagcaggagcgcagcttt
cggatcacctttgattga
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