Cinclus cinclus (white-throated dipper): 134050120
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Entry
134050120 CDS
T10813
Name
(RefSeq) heat shock factor protein 3-like
KO
K09416
heat shock transcription factor 3
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccic03000
]
134050120
Transcription factors [BR:
ccic03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
134050120
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
Vert_HS_TF
UPF0242
Ets
PEARLI-4
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
134050120
NCBI-ProteinID:
XP_062358960
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Position
15:7754708..7770273
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AA seq
558 aa
AA seq
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MREAPALPRGPAAPAAPAPGPVPVPGFLAKLWALLEDPDSDDVICWSRNGENFCILDEQR
FAKELLPKYFKHNNISSFIRQLNMYGFRKVIALENGIITAEKSSVIEFQHPFFKQGKAHL
LENIKRKVSAVRTEDLKVCTEDLHKVLSEVQEMREQQNNMDVRLANMKRENKALWKEVAV
LRQKHSQQQKLLSKILQFILSLMRGNYIVGVKRKRSLTDAAGASPSKYSRQYVRIPVESG
QAMAFSEHSADEDDGNGTGLIIRDITDTLENATNGLLAVAHTSGRAREPQAALDPGLPLC
QVSQPSELNCAEPVPSVPINDVSKSSDVGTAAVELHTAQPNAPEDPVSVIDSILNENNSG
NQSDPLLDREEIQDFLNCIDASLEELQAMLSGKQYNFGAEAFSDTFNPELPALDMSLMET
PSGIENMASLAESTEGLGASERETAGSKDMQLIQYRANPLLSLFEELPSGESAGKVDDPK
DFLLPPLEEKPALQPPSGSGTVVPLAAPASQAEPLDTLGMGDPPLLPEDGNGEYKLFPLL
LLSPVANFIDEASEIEIS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaggcgcccgcgctgcctcgcggccccgccgcccccgccgcgcccgcccccggc
cccgtgcccgtgcccggcttcctcgctaagctctgggccttgctggaggatccggacagc
gacgacgtcatctgctggagcaggaatggcgagaatttttgcattctggatgagcagagg
tttgccaaggagctgctccccaagtacttcaaacacaacaatatctccagcttcatacgg
cagctcaacatgtatggtttcaggaaggtgattgctctggagaatggtatcattacagca
gagaaaagctcagttattgagttccagcaccccttcttcaagcaagggaaggcacattta
ctggaaaacatcaagcgcaaggtgtctgcagtgagaactgaggatctcaaggtctgcaca
gaggatttgcacaaagtcctgtctgaagtgcaggagatgagagagcagcaaaacaacatg
gatgtcaggctggctaacatgaagagagaaaataaggccctgtggaaagaagtggcagtt
ctaaggcagaagcacagtcaacaacagaagctgctgtctaagattcttcaatttatacta
agtttgatgcgaggaaattatattgttggggtcaaaagaaaaaggtctctcacggatgct
gcgggtgcttcaccctccaagtacagtcggcagtatgtccgcatccctgtggagagtggc
caagctatggctttttctgaacatagtgcagatgaagatgatggaaatggtacaggtctg
ataatccgagatatcactgacaccctggaaaatgccaccaatggtctccttgctgtggca
cacacaagtggcagggccagagagccacaggcagctctggatcctggcttacctctttgt
caagtatcacagccaagtgagttaaattgtgcagaacctgttccatcagttcctataaac
gatgtcagcaaatccagtgacgtaggcacggctgctgtggagcttcacactgcacagcca
aatgctccagaggaccctgtgtcagtaattgactccatcttgaatgagaacaactctgga
aaccaaagtgatcctttgctggacagagaggaaattcaggattttctgaactgcatcgat
gccagccttgaagagctccaagcaatgctgtcagggaaacagtacaactttggtgccgaa
gcgttcagtgacacatttaatccggagctgccagccctggatatgagcttgatggaaact
ccctctggtattgaaaatatggcaagcttggcagagagcactgaaggtctgggagcgagt
gagagggaaacagcaggaagcaaagatatgcagctgatccagtacagggccaaccctctg
ctttccttatttgaagagctgccttcaggtgaatctgctgggaaggtggacgatccaaaa
gactttctgctgcctcccctggaggagaaacctgctctccagcctccatcaggcagtgga
accgttgtgccacttgcagctccagcaagccaggctgagcctctggacactctgggaatg
ggtgatccccctctccttccagaagatgggaatggagagtataaactgtttccacttctg
cttctcagtcctgttgctaacttcatagatgaggcctctgagatagaaatttcttga
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