Cinclus cinclus (white-throated dipper): 134050171
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Entry
134050171 CDS
T10813
Name
(RefSeq) neural-cadherin-like
KO
K27892
neural-cadherin
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
Cell adhesion molecules [BR:
ccic04515
]
Cadherins
Cadherin related
134050171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134050171
NCBI-ProteinID:
XP_062359047
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Position
1:128749820..128788642
Genome browser
AA seq
2508 aa
AA seq
DB search
MYPYPYLARVDPDARKGTLIYQLVTRSSSHGNTTAGITYTLIAGGEERFRVDKDTGIIMT
TGLPLTWNKEYVVTVEASDEYGNKSPYASVSILAGSRPPQFTNMSYSVFVPENTPAGEKV
AVVEAVSFQSQPLSYTLLTNPSGLFRLRQESGELSLTHPVDYESEHHLYHLLLKAMEVES
TLSSVTEVMVHITDENDCSPEFQRSIYSRDNVPETIPVGTSLLQVLATDCDSGSNSEISY
FIQSTDFSITHHGVINSNQRLNFERANHMYEFVVIAVDKGHPPRTGTASVRIRMANVNDE
APVFSQSIYRTFLSEDAGPGTLVATVRAEDPDGDGLLYLITGGNEEGNFELDSQKGIIKL
RRNPPPSLKGPQYTLNVTAIDDNASGGPTPLSSFAEVIVGVNDINNNKPVFRECAYYSDS
TWVLENQPPGTHVLQVEAYDADLGINGEVKYGLMHRDGASLGFSIDPDTGAITTTQSFDR
EKQREYTLSVTATDQAQEPLIGVCQVTVLIADVNDNDPKFENSRYQYFLSEDTPVGMSFL
RVVAHDSDQGVNAAVTYSMLEHQLEYFQINPTTGWVYVNCPLPQTMRISRYIVATDGGNR
SSTVELTVTVTSALSQPPRWEQSTYWVTIPENTLRDARIVTIKATSPLGDPRVTYNLEEG
QVPETNMPVRFYLKPNRADGSASLLVAEQLDFETTKFFTLTVRAQNVAMTPLASFATVCV
NITDVNDNVPFFMSSNYEVSVPEGADVGTSVVQVLAMDLDSGLHGEVHYFILKDANEDYQ
FFTIEPETGIISTQASFDREKRASYLIEVQSQDLSESARPGVHGQPNTDTAYVRIFVSDV
NDNAPSFPRSVYEVSIDEDRDVGTPVVTATANDEDEGANAKLRYQITSGNVKGVFDVEPE
TGTVFIAQPLDYEQEQHYELRLVASDGKWENHTLIIINVVNKNDEAPVFTQNEYQGSVLE
ELTDLPVLVLKVSATDPDQAADQNAINYSLHGQGASSEFSINENTGEISAHKKLDREKRS
TWRFLVLATDEGGEGLTGFADVIIEVRDVNDNAPLFLCVSDGCFMGHIPEDSPADTSIME
MTAADLDDPKAGINAVLTYSIIQNVKNEINLNLFSIDSVSGTISTVLGSLDREKEDKYLV
VVEARDGGGLTGTGTATILLTDINDHAPVFLQRIYTAFVSENASINTEVVVVSAVDRDEG
ENAMVTFSIIDGDNDRKFSIETDEVNNCGFIRLRKQIDFEKPHERVFNLTVKAEDMDFFS
ITHCVIYVEDSNDHAPVFYPQFYEVAALEEDVPAGTKVIQVSAVDLDSGLNGRVFFHLLN
KSDPGGQFSLDSDGWLMVAGLLDHETVAQYQLIVIATDTGQPPLTGSATVLVTLQDVNDN
GPEFEAHYNPVVWENTASPQVVQMNETSTLLYAKDRDTAVNGAPFSFRLLGDFDSLSTFS
LQDFHNGSAMLTALRTFDREVHKAFYLPILITDSGMPPMSSTNTLTVNIGDQNDHPHSAG
YMECLIYSYDGILPMTVLGQVSAPDADDWDRKIYQFEGKTSRYFILNDNSGLLTIKEGTP
PGTYNIRVRVIDGVWPDVISTVKVIVKEIKDDALQNAGSVRIKGVTPEEFISQSPEKQSK
YYQMKKLLSEILSVQLENVHIFSVLNSPSPIQGVDVWFAVYGPPYYKAEKLNGNVAASRA
WLESILGINISQTGIDECVTADCTHSSGCISKHEQNHVPTITTAGSISLVSVTVLSHAVC
GCAARENPHLSCSSYLTNPCLNGGTCVDTGLGYRCKCAANFHGPDCQQTRHSFRGHGYAW
FPPLQPCFESRISLEFITEVVDGLLLYHGPAAQGQPAERENFLALELSGGVPSLTLSHSS
GELFLQLSQKVNVADRRWHNIKIINDGKEVKLILDNCMNVSARNNGSITKISQMDLSACE
ASGEIVGSQSMGKLFSGHQPLQLGGVKKTLPYHNSQRHFRGFVGCIRNVIVDSKVYDLEH
PAESLNSAPGCVLTDEMCQSDGVASCGTHGKCVGGWNFFRCDCSPGYAGLACEKVLPEWA
FGRDSWIHYEPRSILSTRSTRIQLMVRTRISHSTLLSLASADGSRYIRLEVAEGFFSVNF
SLGDKNHSLRMRTLRINNGQWVLLTMERYNNEFTLRVNNGGGDQEVTSVLGMNRWFEMDW
ASIVLGNHLPSHPESDFQGCMRDVQLDGYPLLVEGRSTEFGLILRRQGITMGCHSSACSS
QPCYSPFLCVDLWRKYECRCPAGKVEVTDTLTGLRHCTSSPCGHWTCRNGGTCVAQSQDK
TICQCPEGYKGRWCEISQVKAGRPVGLSSGSILAISMCLLVFLALLVSYTVWSQWGSSGF
RKGGIYHIPEERESWEDVRENVFNYNEEGGGERDQNAYDIDELKKPLHKTPRSTLPAAAS
HSRTPTGPKRDSVPKHAHQKQSISAVTSIPDFKEYVSQIIRDADNDLKSLPADTIHFYCL
EGQCSLAGSLSSLDSISGDEDLNYDCLQEWGSKFEKLKELYVVSNENL
NT seq
7527 nt
NT seq
+upstream
nt +downstream
nt
atgtacccatacccgtacctggcacgcgtcgatcccgatgcgcgcaagggcactctcatc
taccagctcgtcacacgctccagcagccatggaaacaccaccgctggcataacctacaca
ctcattgcaggtggtgaggagcgattccgagtggataaggacactggcattatcatgacg
actggcttgcctttgacgtggaacaaggagtatgtggttactgtggaagcctctgatgag
tacggcaacaaaagcccctacgcctctgtttccatcctggcaggctcccgacctccacag
ttcactaacatgtcctacagtgtgtttgtccctgaaaatactccagcaggagaaaaagta
gcagttgttgaggctgtttctttccagagccagcctctttcctacactctcctgacaaac
ccctccgggctctttcggctgaggcaagagagtggagagctcagcctgacccaccccgtg
gactacgagagcgagcaccacctctaccacctcttactgaaagccatggaagttgagagc
actctcagcagtgtgactgaggtcatggtccatatcactgatgaaaatgactgttctcct
gaatttcagcgctccatttacagcagagacaatgttcctgaaaccattcctgttggcacc
tctcttctgcaagtgcttgcaacagactgtgactctggctccaactctgagatctcttac
ttcatccagagcactgatttttccatcacacatcacggggtcatcaattctaaccagagg
ctgaactttgagcgagcaaaccacatgtacgagtttgtggtgatagctgtcgataaagga
catccgcctcggacggggacggcgtcggtgcgcattcgaatggccaatgtcaacgacgag
gctcctgtcttctcccagtccatttacaggactttcctttcggaagatgctggtcctggc
accttggtggctactgttcgggcagaggaccctgatggagatgggctgctttatctgatt
acaggaggcaatgaggagggcaactttgagctggatagccagaaaggtatcattaaactc
cgcagaaaccctccacccagtctgaaagggccacagtacaccctgaatgtcactgccata
gatgacaatgcctcaggaggacccactcctctcagcagttttgctgaggttattgtagga
gttaacgacattaataacaacaagcctgtctttagagagtgcgcttactacagtgacagc
acctgggttctggagaatcagcctccaggcacgcatgtgctacaggtagaagcctatgat
gcagacctcggcatcaatggagaagtgaagtatgggctcatgcaccgagatggagcttcc
ctaggcttcagcattgacccagacacaggagccatcaccaccacgcagagttttgaccgg
gagaagcagagggagtacactctgtctgtcactgccactgaccaggcgcaggagccgctg
atcggcgtgtgccaggtcaccgtcctcatcgctgatgtcaacgacaacgaccccaagttt
gagaacagtcgctatcagtacttccttagcgaagacactccagtggggatgagtttcctc
cgagttgtagctcatgacagtgaccagggtgtgaatgctgctgtcacatactcaatgtta
gagcatcagctggaatacttccagatcaaccccaccacaggctgggtgtatgtgaattgc
ccgctaccccagacaatgcgcattagccgctatatcgtagcgacagatggtgggaacagg
agcagcactgtggagctgacagtgactgtcactagtgcactgagccagccaccccggtgg
gagcagagcacatactgggtaaccatccccgaaaacacccttcgggacgccaggattgtg
accatcaaagccacatcccctcttggtgatcccagggttacgtataatctggaggagggt
caagttccagagactaacatgccagttcgtttctatctgaagccaaacagagctgatgga
tctgcttctcttctagtcgctgaacaacttgactttgagacaactaagtttttcaccctg
acagtccgggcacaaaatgtagcaatgactcctttagcttcctttgccactgtttgtgtg
aatataacagatgtcaatgataatgttccattcttcatgtcctctaactacgaggtgtct
gtgccagaaggagctgatgttggcacatccgtggttcaggtgttagctatggacttggat
tctggcctacatggagaggttcactacttcatattaaaagatgctaatgaggattatcag
ttcttcaccattgaacctgagacaggaattatttccacccaggcatcttttgacagagag
aaaagagcctcctacttgattgaagttcaatctcaggacttatcagaatctgctagacct
ggtgttcatgggcagcccaacacagacacagcctatgtgaggatttttgtcagcgatgtg
aatgacaacgctccgtcatttcctcggtctgtgtacgaggtcagcatagatgaggacagg
gatgttggaactcctgttgtgacagcaacagcaaatgatgaagatgagggtgcaaatgcc
aaactaaggtatcagatcacttcaggaaatgtgaaaggggtttttgatgtggaacctgag
actggaactgtctttattgctcagcctctggattatgaacaagaacaacattatgagctc
cggcttgtagcttctgatggaaaatgggaaaaccacactcttatcatcatcaatgttgtc
aataagaatgatgaagcaccagtcttcacacagaatgaataccagggcagtgtcttggag
gagctcacagatctgcccgtacttgtcctaaaggtttctgcaacggatcccgaccaggca
gcagatcaaaatgccattaactattccctgcatggacagggagccagcagtgaattcagc
atcaatgagaacacaggtgagatcagtgcacacaaaaagttggaccgagagaagcgatca
acgtggcgcttcctcgttctcgcaacggatgagggcggagagggactgactggctttgca
gatgtgatcatagaagtgagggacgtgaacgacaacgcaccccttttcctctgtgtgtca
gatggctgtttcatgggccacatccctgaggactctccggctgacacttccatcatggaa
atgacagcagcggacctcgatgaccccaaggctggtataaatgctgtgctgacatacagt
atcattcagaatgtcaaaaacgaaattaatttgaacttgttctcaattgattcagttagt
ggcaccatctctacggtgctcgggtccctggaccgcgagaaggaagacaagtacctagtg
gtggttgaggccagagatggaggagggctcactgggacaggcactgccactattttgctg
actgacataaatgatcatgctccagtcttcctgcaaaggatttacacagcatttgtctcc
gagaatgcgagtattaacactgaggtggtggtggtgtctgctgtggacagagatgaggga
gaaaacgccatggtgacattcagcatcattgatggggacaatgaccgcaagttctccata
gagacagatgaagtcaacaactgtgggtttatccgactacgcaaacagattgactttgag
aagcctcatgagagggtattcaatttgactgtgaaagcagaggacatggattttttcagc
atcactcactgtgtgatctatgtggaggactcgaatgatcatgctcctgtcttctatccc
cagttctatgaagtggctgcacttgaggaagatgtaccagctggtaccaaagttattcag
gtttctgctgtggacttggattctggcctgaatgggagggtttttttccatctgctaaac
aagtctgatccaggtggccagttctctttggatagtgatgggtggctgatggtcgcagga
ttgctggatcatgagacagtggctcagtaccaactcattgtgattgccactgatacggga
cagccccctctgactggcagtgctactgttttagtgactctgcaggatgtaaatgataat
gggccagagtttgaggcacattataacccagtggtctgggaaaacacagcttctccacag
gttgtccaaatgaatgagacctccacactgctgtatgccaaggaccgagacactgctgtg
aacggagcacctttctcctttcgccttctcggtgatttcgatagcctgagcaccttcagc
ttgcaggacttccataacggcagtgccatgcttactgccctgcgtacctttgacagggag
gtgcacaaggcgttctacctgcccatcctgatcacagacagcgggatgccacccatgagc
tccaccaacacactgactgtgaacatcggggaccaaaatgaccacccgcattctgctggc
tacatggaatgtctcatttacagctatgatggtattctccccatgactgtactgggccag
gtcagcgcccctgatgctgatgactgggatcgcaaaatctaccaatttgaagggaaaacg
tcaaggtactttatccttaatgataactcaggtttgctgactattaaagaaggaacccca
ccaggaacatacaacataagagttagagtcattgatggagtctggccagatgttatctcg
actgtaaaggttatagtgaaggaaatcaaagatgatgccctccaaaatgctggttctgta
cgaataaaaggtgtcacaccagaggagttcatatcccagtcccctgaaaaacaaagtaaa
tactaccagatgaagaagctgctttcagaaattctctcagttcaactggaaaatgttcac
attttcagtgtactgaatagcccaagtccaatccaaggggttgatgtttggtttgcagtt
tatggtccaccttattataaagcagaaaaacttaatgggaatgtagcagcttccagagcc
tggctggaaagcattctgggcataaatatcagccagactggcattgatgaatgtgtgact
gcagactgcactcacagcagcggatgcatcagtaagcatgaacagaaccatgtaccaacc
ataaccacagctggaagcatttcactggtgtctgtgacagtcctgagtcatgctgtgtgt
ggctgtgctgctcgggagaatcctcatctttcctgctcctcatacctgacaaacccttgt
ctcaatggtggcacatgtgtggatactggtttgggctacagatgcaaatgtgctgcaaat
tttcatggaccagactgccaacaaacaagacacagcttcagaggccatggttatgcctgg
ttccctcctcttcagccttgctttgagagccgcatctccttagagtttatcactgaagtt
gttgatggccttctgttgtaccatggaccagcagcacaagggcagcctgcagaacgggaa
aatttcctcgctttagaactctctggtggtgtcccatcactgaccctgagccacagctct
ggtgagcttttcctgcagctgtcacaaaaagttaatgttgcagatcgccgctggcacaat
attaaaattataaatgatggaaaggaagtgaagttgattcttgacaactgcatgaatgtc
tcagctaggaacaatggcagtatcactaagatttcccaaatggatctgtctgcctgtgaa
gcctctggagagattgtgggatctcaaagcatgggtaagctcttcagtggccatcagccc
ctgcagctgggtggagttaagaagaccttgccttaccacaactcacaaaggcatttcaga
ggatttgtgggctgcatacgcaatgtcatcgttgatagtaaggtctatgatttagagcac
cctgcagagtccctgaacagtgctcctggctgtgtccttacggatgaaatgtgtcagagt
gacggggtggcctcttgtggcacccatggcaagtgtgttggtggctggaatttctttcgc
tgtgactgctccccaggatatgctggattagcatgtgaaaaagttcttccagaatgggct
tttggaagggacagctggatccattatgagccaaggagcatcctcagcactcgaagcact
cggatccagctgatggtgcgcacccggatctcccacagcacccttctcagcttggcctct
gcagatgggagcagatacatccgactggaggtggctgagggtttctttagtgttaacttc
agtttgggggacaaaaatcactctttgagaatgagaacattacgtataaacaatggccag
tgggttcttctgaccatggagcgctacaacaatgaatttaccctgcgtgttaacaatggt
ggaggtgatcaagaagtcacctctgtcttgggtatgaatagatggtttgaaatggattgg
gcaagcattgtgctaggaaaccaccttcccagtcatccagagagtgatttccaaggctgt
atgcgtgatgtccagctggatggctatccactcctcgtggaaggcagaagcacagagttt
ggattaattttgaggcggcaagggatcaccatgggatgccattccagtgcctgcagcagc
cagccctgttacagccccttcctttgtgtagacctttggagaaaatatgaatgccggtgc
ccagctgggaaagtagaagtgactgacacccttacagggctcagacactgtacttcatcc
ccttgtggacactggacctgtaggaatgggggtacttgtgtggctcaatcccaagacaag
actatctgccagtgccctgaaggttacaagggaagatggtgtgaaattagccaggtgaag
gctggaagacctgttggactaagctctggctctattctggcaatcagcatgtgcctcctt
gtcttcctagcactcttggtttcctacacagtgtggagtcagtggggaagttctggtttt
cgaaaaggaggaatttaccacattcctgaagagcgtgaaagctgggaggatgttagagaa
aatgtcttcaattataatgaagaaggaggtggagagcgtgaccagaatgcttatgatata
gatgaactgaagaaacctctccataaaactcctcgctccaccttaccagcagctgcttca
cactccaggacaccaactggcccaaaaagagactcagtcccaaaacatgcacatcaaaag
caatcaatatcagctgttaccagcatcccagacttcaaggaatatgtttctcaaatcata
cgggatgcagacaatgatctaaagagtctgccagctgacactattcatttttactgcttg
gaagggcaatgctctctagcagggagccttagctcattagattccatcagtggggatgaa
gatctaaattacgattgcctccaagagtgggggtcaaagtttgagaagcttaaagaactc
tatgtggtctcaaatgaaaatctgtaa
DBGET
integrated database retrieval system
