Cinclus cinclus (white-throated dipper): 134050239
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Entry
134050239 CDS
T10813
Symbol
AFF2
Name
(RefSeq) AF4/FMR2 family member 2
KO
K15194
AF4/FMR2 family member 2
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
Transcription machinery [BR:
ccic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
134050239 (AFF2)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134050239
NCBI-ProteinID:
XP_062359159
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Position
15:6382313..6635418
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AA seq
1308 aa
AA seq
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MAQSQAGSVSALGFVSGESEPKSDAHFDAVTHVSGLNSASHYEQDRSALKRKEWERRNQE
VQQDEDLFASGFNLFGEPYKTNKGDALANRVQNTLGNYDEMKDLLTNHSNQSHLVGIPKN
SVPQTPIDKNEQNFFPEPRNRMIPSHQISGNSSTSMPPPSSLSSNSTLLHSHQSSRKSRT
DWSRSGHNSSGAQPSQSSGQQSRTKHSSSHDQSQGRYEDLYNCQSEQHKSGGTDEANAMA
TSSHSRRHTHAKSAPGEHTYKENTHSKSPSELEFVGHGPGSPVPSTSLLTANNGLSTQNF
PPGLHCKNSMVQQKPTAYVRPMDGQDQVPNDSPELKPPIEIESGYGNQSFGTLLEGKVNT
PSSKNKVPKLNIPPVSEVALPNDSSCVEEILREMTHSWPPPLTAIHTPGKAEQTKFSIPS
KDSQHLTSGYNVQKWSDPAGKVATKSVPQKSMLEDDLKLSSDEDDNEQAAEKTKLRNIPV
NSLPVPVAHATGLTHSSGGSDSSSESESSSESDSDSESSSSDSECNEESRSATPEPEPPS
TNKWQLDKWLNKVNPHNKTIINSQNETLSESSSQAQSNQQAEGPNKGKLNSSLPPADSKD
RAILSPIREKAKPRVAQKTPEAKVSKQKSPAHNEPTSQRTTGKKQPKKVERTSSVEEYNW
PKPNNTSNTPKEKDTQEPPEQPKVRTKAAVGKTAPRKEPRTSTGLTSEKKKYRGPSKIIP
KSREFIETDSSTSDSNTDQEESLQAKVLPACTGSGSGVKVKDSGSNILSVSSLTSNGSNT
SIDQTSNDLEEQLFSPIPIVQNILLSPLREYEELKSLWVKIDLSLLSRVPGQETFETTSV
KSEPREANVKHRRPSRESPTPAAEKPSTKSKRKHKQTEGLDTFVESKKQRLEDPPASCLL
PPCISPIPNHRITSTKESNNSSVKKATKKREEKLFPPPLSPLLDDPVHRRHSSDNSTFSQ
EPTVTNTSQTSSSSSSASKHRKNENKSSSNPKAICEEECHSTPTANTLLDTSHLEPDIWS
AMPRLSNGNSEPRRPKITFDDVLHNADYYMQEAKKLKHKADALLEKFGKAVNYADAALSF
IECGNAMERDPLEAKSPYTMYSETVELIRYAMRLKNFTGSSATEGDKKLAVLCYRCLSLL
YLRMFKLKKDHAMKYSRSLMEYFKGFTRCYTDVKGRMSKQNSSKASQAPSPWGGNGKSTE
TPSPMSLSPSPVSSAGSSTGTASSSSVGTITIPQRIHHMAASHVNITNNVLRSYEHWDMA
DKLTKENKEFFLDLDSVMGPLTQHSSMTNLVRYIRQGLHWLRIEAHLL
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggctcagagtcaggctggatctgtcagcgcccttggttttgtctctggcgagtctgaa
ccaaagagtgatgctcattttgatgcagtaacccacgtgtctggtcttaacagtgcaagt
cactatgagcaagaccggagtgcacttaagcggaaggaatgggagagaagaaaccaggaa
gtccagcaagatgaagatctctttgcttcaggttttaacctcttcggggaaccctacaag
acaaataaaggcgacgcccttgcaaaccgtgtccagaacacattgggaaattatgatgag
atgaaggatctgttaaccaaccactccaaccagagccaccttgtaggaatcccaaagaat
tctgtcccacagacacccattgacaaaaatgagcagaactttttcccagaaccaaggaac
aggatgatcccatctcatcagattagtggcaactcatcaacatcaatgccaccgccttct
tcattgtcatctaattctactttgctacacagccaccagagcagcaggaagtcaaggaca
gactggtcccgcagtggtcacaactccagtggggctcagcccagccagtccagtggtcag
cagagtcggacaaagcacagctcttctcatgaccagtcacagggcaggtatgaagatctc
tataattgccagagtgagcagcataaaagtggaggaactgatgaagcaaatgctatggca
acatcttcacattcaaggaggcacactcatgctaagtcagcacctggagaacacacttac
aaagaaaacactcattcgaagtcaccctcagagcttgagtttgtaggccatggtcctgga
tctccagttccttccacttctttgttaactgcaaacaatggtctttcaactcaaaatttc
ccaccaggacttcactgtaaaaacagcatggtccagcaaaagcctacagcttatgtcagg
cctatggacggtcaggaccaggtacccaatgactcacctgaattgaaacccccaatagaa
attgagagtggatatggaaatcagtccttcggaacactgctggaaggaaaagtgaacact
cctagttcaaagaacaaagtaccaaagctcaacattcctcctgttagtgaagttgccctt
cccaatgactccagctgtgtggaagaaatactgcgggagatgacccattcctggcctcct
cctcttactgctattcacactcctggcaaggctgagcagaccaagttttctatcccaagc
aaggactcccaacatctgacctcaggatacaatgtacaaaagtggagtgatccagcaggg
aaagttgcaactaagtcagtgccacaaaagtcaatgcttgaggatgatctaaaactcagc
agtgatgaagatgacaatgaacaggctgccgaaaagacaaaattgagaaacattcctgta
aacagcctgccagtgccagtggcacacgccactggcttgacccattccagtggtggctcc
gacagctccagcgagtccgagagcagctccgagtctgactccgacagcgagagcagctcc
agcgacagtgagtgcaacgaggagtcccgcagtgccacgccagagcccgaacccccctca
acgaacaaatggcaactggataaatggctaaataaggtgaacccccacaacaagaccatc
atcaacagtcaaaatgagactctcagtgagagcagctcccaggcccagagcaaccagcag
gccgaagggccaaacaaagggaagctcaacagcagcctgcccccagccgattccaaagac
cgggcaattcttagtcccatccgagagaaagccaaaccacgggttgcccagaaaacccca
gaggcaaaagtctccaagcagaagtcaccagctcataatgagccaacttcacaaaggact
actgggaaaaagcaacccaaaaaggtagaaaggacttccagtgtagaagagtataactgg
cccaaaccaaataataccagcaacactcccaaagaaaaagatacacaggaaccccccgag
cagccaaaggttcgaactaaagcagcagttgggaagacagctccaaggaaagaaccacga
actagcacaggtctcacttcagagaagaaaaagtacagaggccccagcaaaattatcccg
aagtcccgggagttcattgaaactgattcatctacttctgactcaaacacagaccaggag
gagagcttgcaggcgaaggtgctgccagcctgcactgggtctggcagtggtgtcaaagtg
aaggactctggcagcaacatcctcagtgtaagtagcttaaccagcaatggcagcaacaca
tccattgatcagaccagcaatgacctggaggagcagctcttttctcctatcccaatcgta
caaaatatacttctgtccccactgagagaatatgaagaactcaagtctctgtgggtgaaa
atagaccttagtttactctctagggtacctggacaggaaacttttgagaccacgtctgtg
aaaagtgaaccaagagaggcaaatgtgaaacacaggcgaccatctcgagagtcccctact
ccagcagctgaaaaaccctccacaaaatccaaaaggaaacacaagcagacagaaggcctg
gatacttttgttgaaagcaagaagcagcgcctggaggaccctccagcttcctgtctgctc
ccaccttgtatctctccaataccaaaccacagaataaccagcactaaagagagcaacaat
agctcagtgaagaaggcgacaaagaaaagagaagagaagctgttccctcctcccttgtcc
ccactcttggacgatcctgtgcaccggcgacacagcagtgacaacagcaccttcagccag
gagcccactgtcacaaacacctcacagaccagcagctcttcctcctctgcttctaaacac
agaaagaatgaaaataaatcttcttctaaccccaaagcaatctgtgaggaagaatgtcac
agtacacccacagccaacactcttcttgacaccagccatttagaaccagacatctggtct
gcaatgccaaggctttccaatgggaattctgagcccagaagacccaaaataacatttgat
gatgtgcttcacaatgcagattattacatgcaggaggctaagaagctgaagcataaagca
gatgcactgctggagaagttcggtaaagcagtgaattatgctgatgctgccctctccttc
attgagtgcgggaacgctatggagcgagatccattagaagctaaatcgccatacaccatg
tactcagagactgtggaactcatcaggtatgcaatgagactcaagaatttcacaggctct
tctgccacagaaggggacaagaaattagcagttttatgctaccgatgcttatcacttctc
tacttgagaatgtttaaactaaagaaggaccatgctatgaagtactccagatctctgatg
gaatattttaagggttttacaaggtgctacacagacgtgaaaggcagaatgagtaagcag
aactcttcaaaagcctcacaggccccctcaccttggggcggcaatggaaagagcacagaa
accccctcgcccatgtccctgagcccatcccccgtcagctctgctggaagcagcacgggc
acggccagctcatcctcagtggggaccatcaccatcccccagcgcatccaccacatggct
gccagccacgtcaacatcaccaacaatgtcctgcgcagctacgagcactgggacatggct
gacaagctgaccaaggagaacaaagagttctttctagacctggactcagtgatgggaccc
ttaacacaacacagcagtatgaccaatctggttcgttacattcgccagggactccactgg
ctccgcattgaggctcatttgttgtag
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