Cinclus cinclus (white-throated dipper): 134050246
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Entry
134050246 CDS
T10813
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked
KO
K16498
protocadherin delta 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
134050246 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccic01009
]
134050246 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccic04515
]
134050246 (PCDH11X)
Protein phosphatases and associated proteins [BR:
ccic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134050246 (PCDH11X)
Cell adhesion molecules [BR:
ccic04515
]
Cadherins
Protocadherins
134050246 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
K319L-like_PKD
Fibulin_C
Cadherin_4
TMEM154
Motif
Other DBs
NCBI-GeneID:
134050246
NCBI-ProteinID:
XP_062359165
LinkDB
All DBs
Position
15:17040534..17418730
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AA seq
1245 aa
AA seq
DB search
MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSP
LQFKLVYKTGDVPLVRVEENTGEIFTAANRIDREKLCAGILSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK
PKTAPKRTFGSITNDQGQNVFGLDITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDG
GSPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQI
HFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVN
VTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDV
PFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAP
VFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTA
VRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLP
MYGTVGLITVTDADAGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVK
AVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDND
TGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYT
IALVHLFVNETVTNSSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTV
ILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGP
IHTRQHTKEVGRPQTPLKETTLEPWTQPQPQRRVTFHLPDGSQESCSDSGLGDHEPTSGA
SASHPLPLGFPQDEFYEQASPNSRTEGDGNSDPESTIEVNLQKALAEASENCTQECLILG
HSDNCWMPPALTQFQQPNTSLPSFGFQQGWGRGARAEGRHALGRALPKDGSDKGQGVPRP
QFYNTCERHCAGEDPVKVIPLANFAASQPAPGPGSSTTFVHEHQL
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctgtctggaacctacctcttggcagtcttgttggcctgcatcgtgttccaa
tctggcgcacaggagaagaattacaccgtgcgggaagaactgcctgaaaatgtcctcatt
ggcaacctgctcaaggatctcaacctaacgctggacccagacgtgcccctgtcctccccc
ctgcagttcaagctcgtgtacaagaccggggacgtgcccctggtgagggtggaggagaac
accggggagatcttcacggctgccaaccgcatcgaccgcgagaagctgtgtgccggcatc
ctcagcgagaaccgctgcttctacgaggtggaggtggctgtcctgcccgacgaggtcttc
agactggtcaagatcaggttcctaatcgaggatataaatgacaacgccccccttttcccc
tcgacagttattaacatctctatccctgagaacacagccattaattcccgctactctgtc
ccatctgccatcgacccggacatcggggtgaacggtatccagcattatgagctcctcaag
cccaaaacagctccgaaaaggacatttggatccattacaaatgaccagggccaaaatgta
tttggtcttgacataactgagacacctgagggagataagtggcctcaactgattgtccaa
cagatcctggacagggagcagaaggacacctatgtgatgaaaatcaaagttgaggatggt
gggagccccccgaggtccagcactgccatcctgcaggtgacagtgaccgacgtcaacgac
aaccgcccggtgttcaaagagaatgacatcgaggtcagcgtgccagaaaacgcccccgtg
ggcacctctgtgtcccagctccacgccaccgacgcagacctgggctcaaatgcacagatc
cacttctatttcagcaaccagatctccagcctggccaaaaggctctttgccatcgataac
accactggcctcatcaccatcagggagccgctggacagggaggaatctcctgtgcacaaa
ctgactgttctggcaagcgatggcagctcgactccctcaagagccacagtgactgttaat
gtcacagatatcaatgacaatgtcccatcaatagacacgaggtacatcatcaaccccgtg
aatgggacagtgcttttgtctgagaaggctccccttaatacaaaaattgctttgataaca
gtgatggacaaggatgctgatcagaatgggaaagttacctgttttacagatcatgatgtc
cctttcaggctaaaaccagtgtttgataatcagtttctcctggagacagccacgtttcta
gactatgaagctacacgggaatatgccatcaaaatagtggcttcagattcagggaagcct
cccttaaaccagtctgcaatgctcctgatcaaaattaaagatgaaaacgacaatgcccca
gttttcacacagcctatcataggcctttccatccctgaaaacaatgctcctggtactcag
ctgaccaagatcagtgccacagatgctgacagcgggcggaatgccgagatcagctacatc
ctgggttctgatgcacccccaattttcaacctggaccgccgtacaggcatcctgacagcg
gtgagaaagctggacagagaaaagcaagacaggtactctttcactgtgctggctaaggat
aacgggatgccacctttgcagaccaatgctaccgtgacggtgtcagtgctggaccagaat
gataacagccctgctttcacacacaatgaatataatttctatgtgccagaaaacctgccc
atgtatggcacagtggggcttatcacagttacggatgctgacgcgggagacaacgctgca
gtcactctctctattttaaatggtagagataatttcattatagatccacttactggagta
ataagacctaatattacctttgatagggagcagcaggggtcatacactttccaggtgaaa
gcagtggatggaggaagactgcagcgttcctcaactgccaaagtgaccatcaatgttgtt
gatgtaaatgataacaggcccgtttttgttatcccctcatctaattattcctatgagttg
gtcccaacgtcagccagcccagggtctgtagtcactaaagtctttgcagttgataatgac
acgggaatgaacgcagagctccgctatagcatcataggtgggaactccaggggcttgttt
accattgaccaattaacaggcaatattactttgaaagagaaagtaattacatcagatcat
ggcttgcacagactggtgatcaaggtgaacgacctgggacagccggagtctctttacacc
atagctcttgtgcacttgtttgtgaacgagacggtcaccaacagctcctacgtgcaagag
ctggtgcgtaggaatatggaaactccagttggccagaacattggggatggtgagataacc
ccacagaccaatgattatgtcaagatcatcattgccattattgcaggcaccatgacagtt
attctggtaatttttgttaccgctttagtccggtgccgccagacgcccaggcacaaggtt
gtccaaaaaaataagcagagtggtgaatgggtttctcccaaccaagagaataggcagatc
aagaaaaagaagaagaagaagaagcgctctccaaagagtctcctcctcaactttgtgact
attgaagagtctaagcctgatgatcctggccacgagcacataaatggcactttagacatt
cccgtagagctagaagaacagactatgggaaaatataactgggccaccacaccaaccaca
tttaaacctgatagcccagacttagcaaagcactacaagtctgcttctccgcagcctacc
tttcaaattaaacctgagactcctgtcccccccaagaagcaccatgtcattcaggaattg
cctctagataacacctttgtggtgggctgtgactcactttccaagtgctcatccagcagc
tcggacccttacagtgtttctgaatgcagctgtcaaggaggcttcaagaccccaggcccc
atacacaccagacagcacacaaaagaagtgggaaggccacaaacccctttgaaagaaaca
accttggagccctggactcagccacagccccagcgccgggtcaccttccacctgccagat
ggctcccaggaaagctgcagtgacagcgggctcggagaccacgagcccacgagcggggcc
agcgcgtcccacccgctgcccctgggcttcccccaggacgagttctacgagcaggcgtcc
cccaacagccgcaccgagggcgacggcaactccgaccccgagtccactatcgaagtgaac
ctgcagaaagctctggccgaagcctctgagaactgcacgcaggagtgcctcatcctcggc
cactccgacaactgctggatgccgccggccctgacgcagttccagcagcccaacacctcc
ctgccctcgttcggcttccagcaaggctggggccgaggagccagagccgagggacgccac
gctctcgggagggccctgccaaaggacggcagcgacaaaggccagggggtgcccaggccc
cagttctacaacacctgcgaaagacattgcgccggcgaggatcccgtcaaggtcatcccc
ctggcaaacttcgccgcgtcccagccggcgccggggcccggcagcagcaccacgttcgta
cacgagcaccagctgtaa
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