Cinclus cinclus (white-throated dipper): 134050251
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Entry
134050251 CDS
T10813
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
134050251 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccic03000
]
134050251 (ATRX)
03036 Chromosome and associated proteins [BR:
ccic03036
]
134050251 (ATRX)
Transcription factors [BR:
ccic03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
134050251 (ATRX)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
134050251 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
134050251
NCBI-ProteinID:
XP_062359174
LinkDB
All DBs
Position
15:complement(2505219..2566760)
Genome browser
AA seq
2460 aa
AA seq
DB search
MEVMKWNSFLSESKLNTLVQKLHDFLAHSSEESEDANSPPALPKNNSIGKNREPKGSPAS
MENNRDEGSSSSERTKSLGLSRSKRKPTVVTKYVGSDDEQIVDEAVNEDISNENSENDVD
MQSLPKGTVVVQPEPVLNEDKDDFKGPEFRSRNTVKMKPEAPKKRGEEGLHGIVSCTACG
QQVNHFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFC
HNAFCKKCILRNLGRKELSTILDENNQWHCYICHPEPLLDLVTACDSVFENLEQLLQQNK
KKMKVENEKSKIYDHTVKFSPKRNNANCNGEEKKLDNSYSGSLTYSYKALMVPKDLLKKT
KKLIETTTNLNSSFVSFLKNAAENVEISPTVQLCQLKAFKSVLSDMKKAHLSLEEGLNLE
IQALNVKIKDKNTKEKKTEVRSEKNEVKDDEGKEHVALKEDDATEPQKKVVSEQADNEPM
DQSVPSVEQTDNKAAPEEEKKSGRNEEPQYEPNSTEALDMDIVSIPSSVPEDIFETLESA
MEIQMPADEQDSGNTAADHETPNSNTKLNTPVKDTKGGTKLKSSAKGTKELIVKLTPVSL
SESTVKAGDQDNSLEKDNKDVDASQDVDASQDVDASQDVDASQDVDASQDVDASPDKAAD
CDSVKQNHSGGSEPSTENDAVPVEDSDLRRSPRVKTTPLRRPTDMSPLTSNSEEDSNDTS
NEKRKRKPSKQPGRKNDKRNSSDSTADGPSPNKLSKSKKPYDLDHSSDSDEVPAVLKEAG
MMSRSSSDSESNSEAPAKNQKTLDFQKSQPVKDENGKRKRKSSSSGSDLDAKRGKSGKNA
AAKKKRQNYSDSSNYDSELEKEIKMLSKIDAAKKSKKKFSQKDDSYDSSEEEQRKKISSK
RKLNLKKKRGKSSEDDDAEKSSLEKEINCSSKDKKTGKRSAAKDKINRDSKEKSAKGKCD
ESSDAERSSLEKEESPEVKKKKDLKKKKAQDDSSSESTEKSAKKDHKLESSKDRLKNKKG
SESKAKKSEKLKKKGFKKEQDDSSSDLDKSSAEKGSSNSSENDKIKKEPMFTEKRKLRER
VAKRVHLDLSSDTEKSPQKEESSDDDAMQRKKRTETKEKKKISHKKKISKKEQNDSSSDE
ESYEDTKKKVKRGSVKENKKSNLKKKVAKKKVVVTSSSSSDKEENDDQNSTGDGSSDEQK
IRPVTESLMLSADAGFCQSSGDEGEALSRTIPMEEEEDDDDDDPENRIAKKMLLEEIKAN
LSSDEDTSSDEQPEEGKKKPAKQTENTGDDGEKEKEDKKSEKEEGDSESDSEEEETSKKP
RYRHRLLRHKLTVSDGESGEEKKVVKPKDKKEGGKRRNRRKVSSDDSNDSEFHESAVSEE
VSESEDDQRPRTRSAKKAEAEENQRSYKQKKKRRRIKVQEDSSSENENKSNSENEDNDDS
KSPGKGRKKIRKIIKDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIEDASPLK
CPITTKLVLDEDEETKEPLVQVHRSIVTRLKPHQVDGVQFMWDCCCESVKKTKTSPGSGC
ILAHCMGLGKTLQVVSFLHTVLLCDKLDFRTALVVCPLNTALNWLNEFEKWQEGLEDEEK
LDVYELATVKRPQERSYMLQQWQDEGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVD
PGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLL
GSIKEFRNRFINPIQNGQCADSTLVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPK
YEYVLEVRMTPIQCKLYQYYLDHLTGVGGGNEGGRGKAGAKLFQDFQMLSRIWTHPWCLQ
LDYISKENKGYFDEDSMDDFIASDSDETSMSLSSDDYAKKKKSKGKKVKKECSSSGSGSD
NDVEVIKVWNSRSRGGGEGNVEDLTNNPASAKSDEGKATSSSNPGSPAPDWYKDFVTDAD
AEVLEHSGKMVLLFEILRMAEELGDKVLVFSQSLISLDLIEDFLELANREKSERDKPPIY
KGEGKWFRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANR
VIIFDASWNPSYDIQSIFRVYRFGQNKPVFVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD
QQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRDTPMLPKDTILAELLQINKEYIVGY
HEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGMTMRFNMPTGTNTMPTNFNSQTYIPYN
LGALSAMSNQQLEDLINQGREKVVEATNSVAAARIQPIEDIISAIWKENLTLTESQVQAL
ALNRQASQELDMKRREAIYNDVLGKQQMLIGCVQRILMNRRLQHQYNQQQQQQMSYQQAA
MGHLMMPKPPNLIMNPSSYPTIDVRGMYQSVSGGMQPPPLQRAPPPMRGKNPGPSQGKSM
NT seq
7383 nt
NT seq
+upstream
nt +downstream
nt
atggaggttatgaaatggaacagctttttaagtgaaagcaagttgaatacattggtacag
aaactccatgacttcttggctcactcatcagaagaatctgaggacgcaaactctcctcca
gcattacctaaaaacaacagtataggtaaaaatagagaacctaaaggaagcccagcttca
atggagaacaacagggatgagggaagtagttcttcagaaagaaccaaatcattaggatta
tcccgttccaaaaggaaacctacagttgtaacaaagtatgttgggtcagatgatgaacaa
attgtagatgaagctgtaaatgaagatatttcaaatgagaactcggagaatgatgtagat
atgcaaagcttgcctaaaggtacagtggttgtacagcctgagccagtgctgaatgaagac
aaagatgattttaaagggcctgaatttagaagcagaaataccgttaaaatgaaacctgaa
gctcccaaaaagcgtggagaagaaggactccatggaattgtgagctgtacagcttgtggg
cagcaggtgaaccattttcaaaaggattcaatctatagacaccctacactgaaagtgctt
atttgtaagacttgttacaagtattacatgagcgatgacatcagtcgtgattcagatggg
atggatgaacagtgtaggtggtgtgctgaaggtggaaatttgatttgctgtgacttttgc
cacaacgccttctgtaaaaagtgcattttgcgcaacctgggccgaaaggagctctcgact
atccttgatgaaaataaccagtggcactgctatatttgccatccagagcctttgttggac
ttggtcactgcgtgtgacagtgtgtttgaaaatttagaacagttacttcaacaaaacaaa
aaaaagatgaaagttgaaaatgaaaaaagtaaaatatatgaccacacagtcaagttttct
ccaaagagaaataatgcaaattgtaatggggaggaaaaaaaactagataattcatattca
ggttcactaacatattcttataaagcactaatggtgccaaaagacttgcttaagaaaaca
aaaaaactgattgaaactacaacaaatcttaattctagctttgtaagctttttgaaaaac
gctgcagaaaacgtagaaataagcccaactgtgcaactgtgccagctgaaagcttttaag
tctgtgctgagtgacatgaaaaaagctcatctgtcactagaagaaggcctgaacctggag
attcaagcattgaatgttaaaatcaaagataaaaataccaaagagaaaaaaactgaggtt
agatcagaaaaaaatgaggtgaaagatgatgaaggaaaggaacatgttgcattaaaagag
gatgatgccacagagccacagaaaaaagttgtgtcggagcaggctgacaatgagcccatg
gatcaaagtgttccctcagtggaacagacagataacaaggcagctcctgaggaagagaaa
aagtctggcaggaatgaagaaccgcagtatgagcccaacagtacagaggctttagacatg
gatatcgtgtccatcccctcgtctgttcctgaagatatttttgagactctggaatctgct
atggagattcagatgccagcagatgagcaggacagtggaaacacagcagcagatcatgag
actccaaactcaaatacaaaattaaacactcctgtgaaagataccaaaggtggtaccaag
ttaaaatcctccgctaaaggaacaaaagaactgattgtaaaattgactccagtttccctt
tcagagtccacagttaaagctggcgatcaagacaacagcctagaaaaggacaataaagac
gttgatgcatctcaggacgttgatgcatctcaggacgttgatgcatctcaggacgttgat
gcatctcaggacgttgatgcatctcaggacgttgatgcatctccagataaggcagcagac
tgtgattctgtaaaacaaaaccacagtggtggcagcgagccctccacggagaatgacgct
gtgccagtggaggactcggatctccggaggtcgccgcgcgtcaagaccaccccgctgagg
cgccccacggacatgagccccctgacatccaactcagaagaggacagcaacgacacgagc
aatgaaaaacgcaagaggaaaccatccaagcaacctgggaggaaaaacgataaaagaaac
tcatctgacagcactgctgatggtcccagtcctaacaaactttccaaatccaaaaagcca
tatgacttagaccacagctcagactctgatgaggtgccagctgtccttaaagaagcaggg
atgatgagtcgcagctcctcagacagtgagagcaacagcgaagcgccagcaaagaatcag
aagacgttggattttcaaaagagtcaaccagtaaaggatgaaaatgggaaacgaaaaagg
aaaagttccagttccggttcagatttagatgctaaaagaggcaaatcaggtaaaaatgct
gctgctaaaaagaaacgacaaaactactccgattcttcaaactatgattctgagttggaa
aaagagataaaaatgttgagtaaaattgatgctgcaaaaaaatcaaagaaaaaattctca
caaaaagatgatagttatgattcctctgaagaagagcagaggaaaaaaataagcagtaag
agaaagttaaatctgaagaaaaagagaggtaaatcttctgaagatgatgatgctgagaag
tcttctctagagaaggaaattaattgctcttctaaagataaaaaaacgggtaagaggtca
gctgctaaggacaagataaacagagactcaaaagaaaaatctgcaaagggaaaatgtgat
gagtcttctgatgctgagaggtcttcactggagaaggaggagagtcctgaagtcaagaaa
aagaaggatttgaaaaagaaaaaagcacaggatgattcttcttctgagagtactgagaaa
tcagcaaagaaagaccacaagttagaatcttctaaagacagactcaagaacaagaaagga
tcagaaagtaaagcaaagaaatctgaaaaattgaaaaagaaaggtttcaagaaagaacaa
gatgattcctcttctgatcttgataagtcatctgcagagaaaggaagtagcaattcttct
gaaaatgacaaaatcaaaaaggaacccatgtttacagaaaagaggaaattgagagagaga
gtagctaaaagagtacaccttgatttatcctctgatactgagaaatcgccccaaaaagaa
gagagttctgatgacgatgccatgcagcgtaaaaaacgaactgaaacgaaagaaaagaaa
aaaataagccacaaaaagaaaatttccaagaaagaacagaatgactcatcttctgatgag
gagtcttatgaagacactaagaaaaaggttaaaagaggatcagtaaaagaaaataaaaag
agcaacttaaaaaagaaagtggcaaaaaagaaggtggttgtcacttcctcttcctcgtct
gataaggaagaaaatgatgatcagaattccacaggtgatggaagcagcgacgagcagaag
atcaggccggtgaccgaaagcttgatgttgtctgctgatgcaggattttgtcagtcatca
ggagatgagggagaggctctatcaaggactatcccaatggaggaggaggaagatgatgat
gatgacgaccctgagaatagaattgccaagaaaatgcttttagaagaaatcaaagccaat
ctttcctctgatgaggatacgtcttcagatgagcagccggaggaaggaaaaaagaaacct
gcaaagcaaactgaaaacacaggagatgatggagagaaggaaaaggaagacaagaagtct
gaaaaggaagagggtgattctgagtcggattcagaggaagaagaaacatccaagaagccc
agatacagacacagactgctgaggcacaagctcactgtgagtgatggggagtctggagaa
gaaaagaaggtggtgaaaccaaaagacaaaaaggaagggggaaaacgaagaaatagaagg
aaagtgagcagtgatgattcgaatgactctgagttccacgagtctgcagtgagtgaagag
gtcagtgagtctgaggatgaccaaaggccaaggacaagatctgccaaaaaagctgaggca
gaagaaaaccagcgcagctacaaacagaaaaagaaacgaaggaggataaaggttcaagag
gattcatcgagtgaaaatgagaataagagcaactctgagaatgaggacaatgatgactca
aaatctcctggaaaaggcaggaagaaaatcaggaaaattattaaagatgataagcttaga
acagaaacacaaaatgcacttaaagaagaagaagaaagaagaaaacgaatagcagagaga
gaacgggagagagagaaattgagagaggtgatagagattgaagatgcttcacctctgaaa
tgtcccattacaaccaagctggttttagatgaagatgaagaaaccaaagaaccattagtg
caggttcacaggagtatagtgaccagactgaaaccacaccaagtagatggtgttcagttc
atgtgggattgttgttgtgaatctgtaaaaaaaaccaagacatctcctggctctggctgt
attcttgctcactgtatgggtctggggaaaacattacaggtagtaagttttctccacaca
gtcttgctgtgtgacaaactggattttcggacagctctggtcgtgtgtccactcaacact
gccttgaactggctgaatgagtttgaaaaatggcaagaaggtttggaagatgaggaaaaa
ctagatgtctatgagctggcaactgtgaaaaggcctcaggagaggagctacatgctgcag
cagtggcaggatgagggaggtgtgatgatcattggctatgaaatgtatcgaaacctggca
caaggcaggaatgtgaagagcagaaaacttaaagaaatatttaataaagctttagtcgac
ccaggtcctgacttcgtagtgtgtgatgaaggacacatattgaaaaatgaagcatctgct
gtttctaaggcaatgaattctattagatctaggagaagaataattctgacaggaacacca
ctgcagaataatcttatagaataccactgcatggttaacttcattaaggagaatttgctt
ggctcgattaaggaatttcggaatcgattcatcaatcccatccagaatgggcagtgtgca
gactccaccctggtggatgtcagggtgatgaagaaacgtgctcacattctctatgagatg
ttggctggctgtgttcagaggaaggattacacagcattaaccaagttcctgccccccaaa
tacgagtacgtgctcgaggtgcggatgaccccgatccagtgcaagctgtaccagtactac
ctggatcatttgacaggtgtaggtggtggcaatgaaggtggaagaggcaaagctggagct
aaactgttccaggatttccagatgttgagcagaatctggactcacccttggtgtttgcag
ctggactatattagcaaagaaaataagggctattttgatgaagacagcatggatgacttc
atagcttcagattctgatgaaacttcgatgagcttaagttccgatgattatgcaaagaaa
aaaaaatctaaggggaaaaaggtgaagaaagagtgtagctcaagtggaagtggcagtgat
aatgatgttgaagtcattaaagtctggaattcaagatctcgtggaggtggggaaggaaat
gtagaagatcttaccaacaaccctgcatcagcaaagtcggatgaaggcaaagctacatcc
tcttccaatcctggtagcccagctccagactggtacaaagattttgtcactgatgcagat
gctgaggtgttggaacattctgggaaaatggtgctgctctttgaaattcttcgaatggca
gaggagctgggagacaaagtccttgtgttcagccagtccctgatatctctggatttgata
gaagatttcctggaactggctaacagggagaaatctgagagagataaacctcctatctac
aaaggtgaaggaaaatggttcagaaatattgattattatcgcttggatggctcaaccaca
gctcagtccagaaagaaatgggctgaggagtttaatgatgaaactaatgtgagaggccgc
ttgtttatcatatccaccaaagcaggttccctgggaataaacctggtggctgctaacaga
gtcatcatctttgatgcctcttggaacccctcctatgacatccagagcatcttcagggtt
tatcgttttgggcagaacaagcctgtgtttgtgtacaggtttttggctcagggaaccatg
gaggacaagatctacgaccggcaggtgacgaagcagtcgctgtccttcagggtggtggat
cagcagcaggtggagaggcacttcaccatgaacgagctcactgagctctacacctttgag
ccagacctgctggatgaccccaactcggagaagaagaagaagagggacacccccatgctg
ccaaaagacacgatcctggcagagctgctccagatcaacaaggagtacatagttgggtac
cacgaacatgattcactcctggaccataaagaggaagaggaactcactgaagaagagagg
aaggcagcctgggcagaatatgaagcagaaaagaagggcatgaccatgcgtttcaacatg
ccaacagggaccaacacaatgcccacaaatttcaactctcagacatatattccttacaat
ttgggtgctctgtcagcaatgagtaaccaacagctggaggacctcattaatcaaggaaga
gagaaggtggtggaagcaaccaacagtgtggctgcagcaagaatccagcccattgaagac
atcatttcagccatatggaaagaaaacttaaccctgacagagagccaggtgcaggccttg
gccctgaacagacaggcgagccaggagctggatatgaagcgcagagaagccatttacaac
gacgtcctcgggaaacagcagatgctgatcggttgtgtccagaggatcctgatgaacagg
cggctccagcaccagtacaaccagcagcagcagcagcagatgtcctaccagcaagcagcc
atgggccacctcatgatgccaaagcctccaaatttgatcatgaatccttccagctaccca
accatagatgtgagaggaatgtatcagtcagtgtctggtgggatgcagccaccaccccta
caacgagcaccacccccaatgagaggcaaaaatccagggccttcccaagggaaatcaatg
tga
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integrated database retrieval system
