Cinclus cinclus (white-throated dipper): 134050283
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Entry
134050283 CDS
T10813
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04010
MAPK signaling pathway
ccic04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134050283 (CACNA1H)
04020 Calcium signaling pathway
134050283 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccic04040
]
134050283 (CACNA1H)
Ion channels [BR:
ccic04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
134050283 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
134050283
NCBI-ProteinID:
XP_062359223
LinkDB
All DBs
Position
16:1921047..2081079
Genome browser
AA seq
2403 aa
AA seq
DB search
MSAGESREPPRPAEVRVPITALPAPRRPAEQPPEDAGSGSGSGSGSSSGGSPGREPPAEL
GSEEEEQVPYPALAPTAFFCLKQTTRPRSWCLRLVCNPWFEHVSMLVILLNCVTLGMFQP
CEDVECQSERCTILEAFDDFIFAFFAVEMVIKMVALGIFGQKCYLGDTWNRLDFFIVMAG
MMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFF
IFGIVGVQLWAGLLRNRCFLDRNFAVTYNLTFLHPYYRPDEAEENPFICSSHRENGMQRC
SNIPSRKESKVECTLSMDSYSPSLAGPEPSRNSCINWNQYYNVCMAGDVNPHNGAINFDN
IGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFS
ETKQRENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYISHIFRKVKRRTIRLYNNWQ
SKRRKKVNPNSGGGQSQRSRRRITSIHHLIHHHHHHHHHHYHISNGSPRGPRANPEICEL
ELQVMKPGRQLMLPPPASPRPPAPRADAAEAVHSIYHADCHVEGPPGGCKATGGPGSGKL
AGLGSHGSMNYPTILPSPGGKGGSAPLPKAKKNGNSPVAVVNSPGNLGLDSYGKLQQLVG
EHGLRRTPSRLSGLSSAGALPSPAGPGLSCELQDCPFCATLLDDPEFALSDSDSNGDSDS
NGVYEFTQDLRHGDHRDQLQQQRGRRRRKKKKAKERNKVMKLWKAFGTKLKRIVESKYFN
RGIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFALEMLLKLLAFGIFGYIKNP
YNIFDGIIVVISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVA
TFCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDW
NVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDTDEDKTSA
NFEDEFEKLKDLRATEMKMYSLAVTPNGHLEGRGAMPPPIIMRTAATPMPTPKCSPHLDS
LHALGDSRRGSNASLDPTGYDQKSLSSLRSSPCTNWGTSSNWGSRRSSWNSLGRAPSLKK
KNQSGERESLLSGEGKGSTDDDSDDAKSSTLSRPSLPRRAESLDYRGSQELPELLRVPSV
RQLGLGPAALLPAEFHDCNGKMGHGPSAEFFLRVDGHKEDALDYEDDMEDSYCYRIRKAL
EPYKPQWCKTHEDWSLYLFSPQNRFRMMCQKVIAHKMFDHVVLVFIFLNCITIALERPDI
DPLSTERIFLSVSNYIFTAIFVAEMMVKVVALGFFSGENTYLQSSWNVLDGVLVFVSIID
IIVSMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICC
AFFIIFGILGVQLFKGKFYYCDGPDVKNITTKADCTNAHYKWVRRKYNFDNLGQALMSLF
VLSSKDGWVNIMYDGLDAVGIDQQPVQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENF
HKCRQHQEAEEARRREEKRLRRLEKKRRSKEMYLSEAQRRPYYADYSPARRYIHSLCTSH
YLDLFITFIIGVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEALLKLVAFGFRRFF
KDRWNQLDLAIVLLSIVGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRA
LLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEENPCEGLSRHATFTNFGMA
FLTLFRVSTGDNWNGIMKDTLRECTREDKHCLTYLPVISPVYFVTFVLIAQFVLVNVVVA
VLMKHLEESNKEAKEDAEMDAEIELEMSRGTNTAGGSRSGAAAPESRELHGKQEHSKGKH
QALGSSSSLRPQDSQNLLTIRKISVSRMHSLPNDSYMFRPVTPAKAPLPLHEVDMETYPC
KAPRGSVTSVRSQPVGSSWLRVPTESLPLATRCRVPAPQDTPGAPGATKPLCRQEAVRTD
SVDGQTPERKDNLQAEPGEPQPSAKQPQSTLTPSPLHSPIPATPPRSPPSSPHRPLSPLA
RKHTCGQHGIPSRPASPTSPSSPEGCQGEPSDLADEEVRHINSSAKDWAEERSEPGSRST
SPFTSPAPSPVPLKNCSTSSLSRKEKDLKKFYSTDTKGFLSKPNWADEQRRHSIEICPSG
SALDCGFQEPTEDKQRPPGHVQPEADYIHGARRKKKMSPPCISIDPPMEDDGAAAPRTKP
SENTLLRRRTPSCEFPTYRESLELPESQPLCRGDHLSIPNFSFEQLDGGSLSSLSELLDS
GQSTPASVDSRPDAELKKTENLKTHRGNGERSKEQLGTAKSPLRKQDLGPVTVGTEEGAD
DPV
NT seq
7212 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccggcgagagccgggagccgccgcgcccggccgaggtgcgggtgcccatcacg
gctctgccggctccgcgccgccccgccgagcagccgcccgaggatgccggcagcggctcc
ggcagcggctccggctccagcagcggcggctcccccggccgagagccgcccgccgagctg
ggctccgaggaggaggagcaggtgccttacccggcgctggcacccaccgccttcttctgc
ctcaagcaaaccacccgcccgcgcagctggtgcctcaggctggtctgtaatccctggttc
gagcacgtgagcatgctggtgatcctgctcaactgcgtcaccctgggcatgttccagccc
tgcgaggacgtggagtgccagtcggagcgctgcaccatcctggaggcgtttgacgatttc
atttttgccttctttgctgtggaaatggtcatcaagatggtggccctgggcatcttcggg
caaaagtgttaccttggagacacctggaaccgcctggacttcttcatcgtcatggcaggg
atgatggaatattccctggatggacacaacgtgagcctctcggccatccgcaccgtccgt
gtcctgcggcccctgcgggccatcaacagggtcccaagtatgaggatcctggtcacgctg
ctgctggacactctgcctatgttaggcaacgtcctcctcctctgcttctttgtcttcttc
atctttgggattgtcggggtccagctctgggcagggctgctgaggaaccgctgtttccta
gacaggaattttgccgtgacttacaacctgactttccttcacccttactaccggccggac
gaggcagaggagaatcccttcatctgctcctcgcaccgggagaacgggatgcagagatgc
tccaacattcccagcaggaaggaatccaaggtggaatgcaccctgagcatggattcctac
agccccagcctggccggccccgagcccagcaggaattcctgcatcaactggaaccagtac
tacaacgtctgcatggcgggggatgtgaacccccacaacggggccatcaattttgataat
attggatatgcctggattgcgatttttcaggttataaccctggaaggatgggtggacatc
atgtattacgtgatggatgcacactctttttacaattttatatattttatattgcttatc
atagttggctccttcttcatgattaacctgtgcttggtggtgatcgccacccagttttcg
gagaccaagcagcgggagaaccagctgatgcaggagcagcgcgcgcgctacctgtccaac
gacagcaccatcgccagcttctcggagccgggcagctgctacgaggagctgctcaagtac
atctcccacatcttcaggaaggtgaagagaaggacgatccgcctctacaacaactggcag
agcaaacgccggaaaaaagtcaaccccaacagcggcggcgggcagagccagcggagcagg
aggagaatcacctccatccaccacctgatccaccaccaccaccaccaccaccaccaccac
taccacatcagcaacgggagcccgcggggccctcgggccaaccccgagatctgcgagctg
gagctgcaggtgatgaagccaggccggcagctgatgcttccccctccggcctcgcccagg
ccgccggctccgcgcgccgacgccgccgaggccgtgcacagcatctaccacgctgattgt
cacgtggaggggcctcccgggggctgcaaggccaccggcggtcctgggagtggcaaactg
gccgggctgggcagccacggcagcatgaactaccccaccatcctgccctcccccggcggc
aagggcggctccgcgcccctgcccaaagcgaagaagaacgggaattctccggtggccgtg
gtgaacagcccagggaatttgggtctggattcatacgggaagctgcagcagctggtggga
gagcatggtctccgccgcacccccagccgtctgtcggggctgagctcagccggggctctg
cccagccccgctggccccgggctgagctgcgagctgcaggattgtcccttctgtgccacc
ctcctggacgaccccgagttcgccctcagcgactccgacagcaacggcgactccgacagc
aacggcgtctacgagttcacgcaggacctgcggcacggcgaccaccgggaccagctccag
cagcagcggggcaggaggaggaggaagaagaagaaagccaaggagaggaacaaggtgatg
aagctctggaaggcgttcggcaccaaactcaagaggatcgtggagagcaaatacttcaac
cgcgggatcatgatcgccatcctcatcaacaccctcagcatgggcatcgagtaccacgag
cagccagacgagctgaccaacgccttggagatcagcaacatcgtcttcaccagcatgttt
gccctggagatgctcctgaaactcctggccttcggaatctttggctacatcaagaacccc
tacaacatcttcgacgggatcatcgtggtcatcagtgtctgggagatcatcgggcagtcg
gacgggggcctgtccgtgcttcgaaccttccgcctgctccgcgtgctgaagctggtgagg
ttcatgcccgccctgcgccgccagctcgtggtgctcatgaagaccatggacaacgtggcc
accttctgcatgctgctcatgctcttcattttcatcttcagcatccttggcatgcacctt
tttggatgcaagttcagcctgaaaaccgacacgggagacacagttcccgacaggaagaat
tttgattccttactttgggccattgtaactgtgttccagatcctcacgcaggaggactgg
aatgtggtgctgtacaatgggatggcctccacctcctcctgggcagccctctacttcgtg
gccctgatgacctttggcaattacgtgctcttcaacctcctggtggccatcctggtggaa
ggattccaggctgagggggatgccaacaggtcagacacagatgaggacaagacatctgcc
aactttgaggacgagtttgagaagctgaaagacctcagagcaacagaaatgaagatgtac
tcactggctgtcacccccaacgggcacctggagggcaggggggccatgcccccgcccatc
atcatgcgcacagcggccaccccgatgcccaccccaaagtgctccccacacctggactcc
ctgcacgccctcggggactcaaggagaggcagcaacgcctcgctggaccccacgggctac
gaccagaagtccttgtccagcctccgcagctccccctgcaccaactggggcaccagtagc
aactggggcagccgccgctcgagctggaacagcctgggcagggcgccgagcctcaagaag
aagaaccagtcgggagaacgggaatcgctgctgtcgggagaggggaaaggcagcacggac
gacgactcggacgacgccaagtccagcacgctcagccggccctcgctgccgcgccgggcg
gaatccctggattaccgcggctctcaggagctgcctgagctgctccgggtgccctcggta
cgccagcttgggctcggccccgccgccctgctgcccgcggagttccacgactgcaacggc
aagatgggccacggccccagcgccgagttcttcctcagggtggatggacacaaggaggac
gccctggactatgaggatgacatggaggatagttattgctaccggatccgcaaagccctg
gagccctacaaaccccagtggtgcaagactcacgaggactggtccctctacttgttttcc
ccacagaacaggttccgaatgatgtgccagaaggtcattgcccacaaaatgtttgaccac
gtggtgctggtctttatcttcctcaactgcatcaccatagctctggagagaccagacatc
gaccccctgagcacagaaaggatattcttaagtgtctctaattacatcttcactgccatc
ttcgtggctgaaatgatggttaaggtggtagctcttggctttttctctggggagaacacg
tacctgcagagcagctggaacgtcctggatggagtcctcgtctttgtatccatcattgac
atcattgtgtccatggcatcagcaggaggagccaaaatcctgggagtccttcgtgtgttg
aggcttctgcggaccctgagacctctccgagtcatcagcagagccccaggtctgaagttg
gtggtggaaaccttgatctcctccttgaggcctattgggaatattgttctcatctgctgt
gctttcttcattatctttggaattttaggggtccagctttttaaaggcaagttctactac
tgtgatggccctgatgtcaaaaacatcaccacgaaggctgactgcaccaacgctcactac
aaatgggtccggaggaaatacaacttcgacaatttggggcaggccctgatgtccctgttt
gtgctctcctccaaggatggctgggtgaacatcatgtacgacgggctggacgccgtgggc
attgaccaacagcccgtccagaaccacaacccttggatgctgctctacttcatctccttc
ctgctcatcgtcagcttcttcgtgctcaacatgttcgtgggggtggtggtggagaacttc
cacaagtgccggcagcaccaggaggcggaggaggcgcggcgccgcgaggagaagcggctg
cgccgcctggagaaaaagcgcaggagtaaggagatgtacctgtctgaagcccagcgcaga
ccctactacgccgactactccccagccaggagatacatccacagcctgtgcaccagccac
tacctcgacctcttcatcaccttcatcatcggcgtcaacgtcatcaccatgtccatggag
cactacaaccagcccaagtccctggatgaagccctcaagtattgtaactacgtgttcacc
atcgtctttgtgttcgaggcactgctgaagttggtggcctttggtttccggaggtttttt
aaggacaggtggaaccagctggacttggccatagttctgctgtcgattgtggggatcacg
ctggaggagatcgagatgaacgctgcccttcccatcaaccccaccatcatccgcatcatg
agggtgctcaggatagccagagtgctgaaactgctgaaaatggctacaggcatgagagct
ctgctggacacggtggtgcaagccctgccccaggtagggaaccttggcctactttttatg
ctcctgttttttatctatgctgccctgggagtggaattgtttggcaagcttgattgcagt
gaagagaatccctgtgaaggcctgagccgccacgccaccttcaccaacttcggcatggcc
ttcctcaccctcttcagggtgtccacgggggacaactggaacgggatcatgaaggacacg
ctccgggagtgcactcgggaggacaagcactgcctcacttacctgcccgtcatctccccc
gtctacttcgtcaccttcgtcctcatcgcccagttcgtcctggtcaacgtggtggtggca
gtgctgatgaagcacctggaggagagcaacaaggaggccaaggaggatgctgagatggat
gctgagatcgagctggagatgtccagagggaccaacaccgccggtgggagcaggagcggg
gccgcagccccggagagccgggagctgcacgggaagcaggagcacagcaaggggaagcac
caagccctgggcagttcatcctccctgaggccccaggattcccagaatctgctgacaatc
cgcaagatctccgtgtcccggatgcattccctgcccaacgacagctacatgttccggcca
gtgaccccagccaaggccccactgcccctacacgaggtggacatggaaacctacccctgc
aaagccccaagaggatccgtcacctccgtccgctcccagcccgtggggagctcctggctg
agggttccaacggagtcgctgccgctggccacgcgctgcagggtcccggccccccaggac
acccccggagctcctggtgccaccaaaccgctctgcagacaggaggccgttcggacggac
tcggtggacggacagaccccggaacgcaaagacaacctgcaagcagagcctggagagccc
caaccatcagcaaagcagccccagagcaccctcacccccagccctcttcattcccccatc
ccggccacccctccacgctcccccccgtcctccccacaccggcccctcagccccctggca
cggaagcacacgtgtggccagcacggcattcccagccggccggccagccccaccagcccc
tcgagccccgagggatgccagggcgagccctcagacctggctgacgaggaggttcggcac
atcaacagctcggccaaagactgggccgaggagcgctcggagcccggcagccgctccacg
tcgcccttcacctccccggctccgtcccccgtgcccctcaagaactgcagcacaagcagc
ctctcccgcaaggagaaggacttgaagaagttctacagcaccgacaccaagggcttcctc
agcaagcccaactgggccgacgagcagcggcggcattccatcgagatctgcccctccggc
agcgccctggactgcggcttccaggagcccaccgaggacaagcagcggccccctggccac
gtccagccggaggccgactacatccacggagcccggaggaagaagaagatgagcccgcct
tgcatttctatagatcctcccatggaggatgacggcgcggcggctccgcgcaccaaaccc
tccgagaacactctgctgcggaggagaaccccgtcctgcgagttcccaacctaccgagaa
tccctggagctcccggagagccagcccctgtgccgtggggaccacctgagcatccccaac
ttctccttcgagcagctggacggcggctccttgagcagcctctcggagctgctggacagc
ggccagtccacgccggcctccgtggactcgcggccggacgcggagctgaaaaagacggag
aacttaaaaactcacaggggcaacggcgagaggagcaaagagcagctgggcactgccaag
agccccctgcggaagcaggacttgggtcccgtgactgttggcacagaagaaggcgcagat
gacccagtatag
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