Cinclus cinclus (white-throated dipper): 134050331
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Entry
134050331 CDS
T10813
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03018
RNA degradation
Brite
Enzymes [BR:
ccic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
134050331 (PARN)
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
134050331 (PARN)
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
134050331
NCBI-ProteinID:
XP_062359316
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Position
16:complement(9869572..9914896)
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AA seq
638 aa
AA seq
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MEVIRSNFKDNLNKVYEAIEESDFLAIDGEFSGISDGPSVSALTNGFDTPEERYQKLKKH
SMDFLLFQFGLCTFKYDDTEEKYIMKSFNFYIFPKPFNRNSPDVKFVCQSSSIDFLANQG
FDFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGAGSLSYISPNSTKCPVTIPEDQKKF
VEKVVEQIEDLLKNEESESLELEPCTGFQRKLIYQTLSWKYPKGIHVETLESDKKERYIV
ITKVDEEERKRREQQKQAKEQEELNDAVGFSRVVHAIANSGKLVIGHNMLLDVMHTIHQF
YCPLPDDLSEFKEVTSCVFPRLLDTKLMASTQPFKEIINNTSLAELEKRLKEVPFSPPKV
ESAEGFPSYDTASEQLHEAGYDAYITGLCFISMANFLGSFLSPPKNHVSARSKLIEPFFN
KLFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQVSWIDDTS
AFVSLSQPEQVQIAVNTSQYAESYRIQTYAEYVEKKHEEKQAKRKCTEDSWKEMERKRLK
TQCAPYVSQSRYYCVNSFTGTSTVGKRSMSPIEEETGSDDMEEGEGQNPENDQTDSCADS
LPDVKKKPKKLKKIKTEKVPAGSLTTSSTGIFEVPETW
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgatcaggagcaattttaaggataacctaaacaaagtgtacgaagccattgaa
gagtcggacttcctggccatcgatggagagttttcaggaatcagtgatgggccttcagtt
agtgcattaacaaatggctttgacactccagaagaaaggtatcagaaacttaaaaagcat
tccatggattttttgctctttcagtttggcctttgcacttttaaatatgatgacacagaa
gaaaagtatataatgaagtcatttaacttctatatttttccaaaaccctttaacagaaat
tcaccagatgtcaagtttgtctgtcagagttcaagtatagattttttagcaaaccaagga
tttgattttaataaagtttttcgcaatggaattccatatttaaatcaggaagaagagaga
cagctaagggaacagtatgatgaaaaacgttctcaagccaacggtgcaggatctctgtca
tacatttctcctaattccacaaagtgccctgtaacaattcctgaagatcagaaaaaattt
gttgagaaagtagtggaacaaatagaagatttattaaagaatgaagaaagtgaaagtttg
gaactggagccatgtacaggatttcagaggaaattaatttatcagaccttgagctggaaa
tatccaaaaggtatccacgtggaaactctagagtcagataagaaagagagatatattgta
attactaaggtagatgaagaggaacgaaaaagaagagagcagcaaaaacaagcaaaagaa
caggaagaattgaatgatgctgtaggattttccagagttgttcatgccattgctaattct
ggcaagcttgttattgggcacaacatgctgctggatgttatgcacaccatacatcaattc
tattgtcctctacctgatgacctaagtgagttcaaggaagtgacatcatgtgtctttccc
cggttactggatactaaactgatggcaagtacacaaccttttaaggagatcattaataat
acatcacttgcagaactggaaaagcgtttaaaagaggttccattcagccctcctaaagtt
gaaagtgcagaaggatttccaagttatgatacagcatctgaacagctccatgaagcagga
tacgatgcttacattactggactgtgcttcatttccatggctaatttcctaggttcattc
ctcagtcctccgaaaaaccatgtgtctgctagatcaaaactcattgaacctttttttaac
aagctatttcttatgagagtaatggacattccgtatctcaatttggaaggaccagacttg
cagcccaaacgagatcatgttcttcatgttacttttcccaaagagtggaagactagtgac
ctataccagcttttcagtgcctttggtaacattcaggtttcatggattgatgatacatca
gcatttgtatcattgagccagccagagcaagtacaaatagctgtaaacaccagccagtat
gctgaaagttataggatccagacatatgcagaatatgtggagaaaaaacatgaagaaaaa
caggccaagagaaaatgtacagaagatagttggaaggagatggagaggaagaggttaaaa
acccagtgcgcaccttacgtttcccagagtcgatactactgtgttaacagttttacaggt
accagtacagtaggaaagagaagcatgagtcctattgaggaagaaactggttctgatgat
atggaagagggagaaggccaaaatccagaaaatgatcagacagattcctgtgcagattcc
cttccagatgttaagaagaaacccaaaaagttgaagaagatcaagacagaaaaagttcca
gcaggaagcctcacaactagctccactggaatttttgaggtccctgaaacatggtag
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