Cinclus cinclus (white-throated dipper): 134050436
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Entry
134050436 CDS
T10813
Symbol
GRIN2A
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04020
Calcium signaling pathway
ccic04080
Neuroactive ligand-receptor interaction
ccic04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
134050436 (GRIN2A)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134050436 (GRIN2A)
04082 Neuroactive ligand signaling
134050436 (GRIN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccic04040
]
134050436 (GRIN2A)
Ion channels [BR:
ccic04040
]
Ligand-gated channels
Glutamate (ionotropic)
134050436 (GRIN2A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
134050436
NCBI-ProteinID:
XP_062359485
LinkDB
All DBs
Position
16:complement(15798539..15954399)
Genome browser
AA seq
1470 aa
AA seq
DB search
MWRENAGIKLAKMRKIGCALLVLQALLAPLDLVHGAEKSYPILNIAVILGRTKYITERDI
RALWTREMSADLTVDINVVTLLVNQTDPKSIITHVCDLMSGTKIHGVVFGDDTDQEAVAQ
ILDFISSQTSIPILGIHGGASMIMADKDVMSTFFQFGASIQQEAIIMLKIMQDYDWHVFS
LVTTTFPGYRDFINVIKTTVENSFVGWDMQNVIILDTAFGDAKTQIQLKKIHSSVILLYC
SKDEAVYILDEARSLGLTGYDFFWIVPSLVSGNTEITPKEFPSGLISAAYDEWDYSLEAR
VRDGLGVIATAASAMLEKYSFIPEARTSCYGQLEKNDRPSQTLHKFMMNVTWEGRDLSFT
ADGYQAHPRLVVMVLNNEREWEKVGKWENNSLSLKYSVWPRYSSFADSDPDDNHLSIVTL
EEAPFVIVEDVDPLMESCQKNTVPCRKFVKLNNKTNEGTNVKKCCKGFCIDILKKLSKTV
KFTYDLYLVTNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVET
GISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAMAVFIFEYFSPVGYNRNLAQG
RDPHGPSFTIGKAVWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAA
FMIQEEFVDQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERNIRNNYPDMHLYMTKFNQK
GVEDALVSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPW
KRQIDLALLQFVGDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMAGVFYMLAAAMALS
LITFVWEHLFYWKLRFCFTGVCSDRPGLLFSISRGIYSCIHGVHIEEKKKSPDFSLTNSQ
TNMLKLLRTAKNMTNINPSRIDSPKRTADFIQRGSLIMDMVMDKGNLTFSDNRSFQTKDS
FFGDNISELQTLPGNRHKDNLNNYVFQGQHPLTLNESNPNTVEVAVTTEAKVNSRPRQLW
RKSVESLRQDSVRQGQGSQRENGSEENRQLSLKSQRYLPEEIVHSDVSETSSRATCHMEA
ENNNKHHKTKDNFKKRTVASKYPKDCSEVELTYLKTKQGSPRDKIYTIDADKEPGFRLDT
PQYIENIVLPEPVELPDVYQDHNDNYRKAEHANRTPSQNEDSLPNNDQYKLYAKHYTLKE
KNASLGDMNDRYRQNSTHCRSCLSNMPTYAGHYSTRSPYKCDACLRMGNLYDIEEDQMLQ
DTTNLSLPEEIYERTWSQSSALQYNKKNKLKISRQHSYDNIADKSREIDIGRPSRSISLK
EREKFLQSSPYASMFSVPSSKLLSNKASLLTHALEDSKRSKSLYAVHSDDNPFLHSYRDD
QHLSLRRSPADLYKHSLPTRGRNDNYLRSSIQSTASYSSRDGRIHNDMYISEHVLPYVAN
RNSLYSTPRVLNSCSNTRVYKKRPSIESDV
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgtggagggagaatgcagggataaagctggcaaagatgaggaaaattggctgtgctctc
ctggtactccaagctcttctggcacctttggatcttgttcatggagcagagaaaagctat
cccatcctgaacattgcagtgattctgggaaggaccaagtatataacagagagagatatc
agagctctctggaccagggaaatgtcagcagacctgactgttgatatcaatgtagtgacc
cttcttgtgaaccagactgaccctaagagcatcataacacatgtttgtgacttgatgtcg
ggcaccaagatccatggagtggtttttggagatgacactgatcaggaggcagtagctcag
attttggattttatttcatctcagacttctattccaattcttggaattcatggcggggcc
tccatgataatggcagataaggatgtcatgtccacgttcttccagtttggggcttccatc
cagcaagaagccattatcatgctgaagatcatgcaggattatgactggcacgtgttctct
ctggtgaccaccactttccctggatatcgagatttcatcaatgtcattaagactaccgtg
gaaaacagttttgtgggctgggacatgcagaatgtcatcatacttgatactgcctttgga
gatgccaagacccaaattcagctgaagaaaatccattcatctgtcatcctgctgtattgt
tccaaggatgaagctgtctacatcctggatgaggctcggtccctgggccttactggctat
gatttcttttggatagttcccagcctggttagtggtaacacagaaatcactcccaaggag
tttccttcaggactcatttcagcagcttatgatgagtgggactacagtttagaagctcgg
gtacgggatggccttggggttattgctactgctgcatcagccatgctggaaaagtactcc
ttcattcctgaggcaagaacgagctgctatggacaactggagaaaaatgaccggccctct
caaaccttgcacaagtttatgatgaacgtgacgtgggaaggcagagatttgtccttcaca
gcagatggttaccaggctcaccccaggctggtggtgatggtgctgaacaacgagcgggag
tgggagaaggtggggaagtgggagaacaactccctgagcctgaagtactcagtgtggcca
aggtacagctccttcgcagacagcgaccccgatgacaaccacctgagcattgtcaccttg
gaggaggctccctttgtcattgttgaggatgtggatcctctcatggaaagctgccaaaaa
aacaccgtgccatgtcggaaatttgtcaaacttaacaacaaaactaatgagggaactaac
gtaaagaagtgctgcaaaggattctgcatcgatatcttgaagaagttgtctaaaactgtc
aagttcacatatgacctgtacttggtgacgaatgggaagcatggcaaaaaagtcaataac
gtgtggaatggaatgattggtgaagtggtgtatcagcgggcagtcatggccgtgggttct
ctcaccatcaacgaggagcgctcagaagtcgtcgacttttcggtgccgttcgtggagact
gggatcagtgtcatggtgtcccggagcaacggcacagtttcaccctctgcttttctggag
ccttttagtgcttctgtctgggtgatgatgtttgtgatgcttctcatcgtgtctgccatg
gctgtctttatatttgagtacttcagtcctgtaggatacaacaggaacttagcacaaggg
agagatccccatggaccatcctttaccattggaaaggcagtgtggttactgtggggcttg
gtcttcaacaactctgtgcctgtgcaaaaccccaaggggacgacgagtaaaatcatggtg
tcagtctgggctttctttgctgtcattttcctggccagttacactgccaacttagctgcc
tttatgattcaagaggaatttgttgaccaagtgactgggctaagtgataaaaagtttcaa
aggccacatgattattcacctccttttcggtttggaacggtcccaaatggaagcactgag
aggaatatccgaaacaactaccctgatatgcacctttacatgaccaagtttaaccagaaa
ggagtggaagatgccttggtcagcttgaaaactgggaagttggatgctttcatctatgat
gcagcagtactgaattacaaggctggaagagatgaaggctgcaaacttgtcacaataggc
agtgggtacatctttgccactactggctatgggattgctctccagaaaggatctccttgg
aagagacaaattgatctcgccctccttcagtttgtgggagacggggaaatggaagagtta
gaaaccctgtggctgactggaatttgtcacaacgagaagaatgaagtcatgagcagccag
ctggacattgacaacatggcaggagtgttttacatgcttgcagcagccatggcactcagc
ttaataacctttgtctgggagcacttattttactggaaactgagattctgcttcactgga
gtctgctcagataggccaggattgctgttctcaatcagcaggggtatttacagttgcatt
catggagtacacattgaagagaaaaagaagtctcctgacttttctttgaccaattcacaa
accaacatgttaaaactgctgcgaacagcaaaaaacatgaccaacatcaacccttcaaga
attgactcccccaaaagaacagctgattttattcagaggggttctttaattatggacatg
gtcatggataagggaaacctgacgttttctgataacagatcctttcagacaaaggacagc
ttttttggtgacaacataagtgaactgcagacacttcctggcaatcgacacaaggacaat
ctgaacaactatgttttccaagggcagcatcctctaacactgaatgaatccaatccaaat
acagtagaggttgcagtaacaacagaagcaaaagtgaactccagacccaggcagctttgg
aggaaatctgttgaatctttacgccaagattctgtacgtcagggccaaggttcccagaga
gaaaacgggtcagaggaaaacaggcagctttcactgaaaagccaaagataccttcctgaa
gagattgtccattcagatgtatcagagacatcaagcagagctacttgccacatggaagct
gaaaacaacaacaagcaccacaaaaccaaggacaattttaaaaaaaggacagtagcatca
aaatacccaaaagactgtagtgaagtggaactgacatatctgaaaaccaaacagggctct
ccaagggataaaatctacacgattgatgctgacaaggagccaggattccgcttggacaca
cctcagtacattgaaaacattgtccttccagaacctgtagagcttcctgatgtttaccaa
gatcacaatgacaactacaggaaagccgagcacgctaacaggactccatcacagaatgaa
gacagtcttccaaataatgaccagtacaaactttatgcaaagcactacactctcaaagaa
aaaaatgcctccctaggtgacatgaacgataggtacaggcagaattccacccactgcagg
agctgtctctccaacatgcccacgtacgcagggcactactcgaccagatctccctacaaa
tgtgatgcatgcttgcggatggggaacctttatgatattgaggaagatcagatgctgcag
gatacaacgaacttatcacttcctgaagaaatatatgagcgtacttggtcacaaagcagc
gctctgcaatataataaaaagaataaactgaagattagcaggcaacactcttacgataat
atcgctgataagtccagggaaattgatattggaagaccttctcgtagtataagcttgaaa
gaaagagagaaatttcttcaaagtagtccatatgcaagcatgtttagtgttccctcaagc
aaactgttgagcaacaaggcctcacttttaactcatgctctggaggacagtaagcggagc
aagtccctgtatgctgttcactcggatgataaccctttcctgcactcctatcgtgatgac
cagcatttatcccttaggcgaagtccagctgatctttataaacattcattgccaacaaga
ggaagaaatgataattatttaaggtcatccatacagtctacagcatcatactcttccagg
gatggtcggatccataatgacatgtacatttcagagcatgttttgccttacgttgcaaat
aggaatagcttgtactcaactccaagggttttaaattcctgtagcaatacacgtgtgtat
aagaaaaggcctagcattgaatcagatgtttaa
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integrated database retrieval system
