Cinclus cinclus (white-throated dipper): 134050552
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Entry
134050552 CDS
T10813
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
Transcription factors [BR:
ccic03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
134050552 (RAI1)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134050552
NCBI-ProteinID:
XP_062359677
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Position
16:complement(2442177..2450587)
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AA seq
1922 aa
AA seq
DB search
MQSFRERCGFHGNQQSYQPTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYTG
YENSAVEKYHRGNKQLAGQQLQGRPAFSNYTVQENSPYPARYSGDESLQAWGGQPQALPG
GVAKYEDNLMKKTVALAGGRPYHEPAATSLPFRTHFQQQPQQQQQQQQQQQQQQQQPPAL
PYPKLQRQKLPNDVSSPMPFSQSPHFGQHSQSFPASSTYSSVPGGSQPAHSYKSCTAPSG
QPPLERPLGSAASLAPGPRVPNLHGYQPNRIGYEQPPQPPPQPPQPPPPQPPQPPQPPQP
PQPMQGRHHASETLHYQNLAKYQHYNQPGQTYCQGDAPPVRTPEQYYQTFSPSASHSPAR
SVGRSPSYSSTPSPLMPNLENFQYSQQPLNAGAFPAGIADHSHFMPLLNPSPTDGTSPDT
QSGNCKNLQKEKLPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKAAVPQKKGIKTPA
RTPEQLKGQHCSPESSTYSAEQVGTPLSDPLSTPQSVHAETQDADYLSGSEDQLERSFLY
CNQNRSPARVNSNSKAKPESVSTCSVTSPDDMSTKSDDSFQSIHATLPLETFTKYVSNER
DCPRLLLSALSQEELASEIIVLQDAISEKADKAWANLPMLGKETTKSPFQLENHRPSLDS
MVKGAWPSQGDSSTLTEPLKLDKASGASTGKDFSEEVYEGPQVEFAATESKDVLKDTAPL
AFNSKSSIPAATSSAGATSYSCYSNTTANSVASENAMEHFEWPEESLGEACLRWKDLQAT
DLPKGLFPSKLVSSCKEKKNACGLDLCDGEQPAKSETVQDFGQQVIEEEEETLTYDEATK
ADSERWLQDTRHCCSAGDFSEIPIISSPDLKESDLEAEEYSSLCELAGSEQKSVTYDASP
PKPPEMPAVLSSSEVPVSAEETVSTVEKESSAPTPRLSGQSVILLGPAVGTETKVKSWFK
SSLPHIQPEEENGGGETSHLEAASAESTSSVMVKQQLTPENVLGKMEPVSRGKSLRNKRV
HCRLSEGSGPGSTVLSPFDELPAASSVAGACLGPDGQTEVPSKSTQSQTPRFPAEGLPAR
MCTRSFTALAEPRAPAPLEGLKAPTHQEKLGKKPGCGVKQRVAFKTRKRNSRPAPRVVQN
ASDTTLLVPGLVAAEEVAGPTPLEGDAVESGERDQRSMILRSRTKTQEVFYTKRQRGKRA
ADVRLKNCKAPKKLISNNHLPPAFKLPAPGSPHKEGKVGARMKLPKAGPGVGGKMSERPL
HSLKRKSTFISPIPTKKRNLVLRSNSGGVKEEKPEGPPSLFKKMPVAKKVKAKLPPKNSG
EAIPKHPLPKEAPDVCIKITSRAAFQEATKTKVLPPRKGRGLKLEAIVQKITSPNLKKFT
CKPAATAVAATVAAYGSSLSPAGAERERVVKHSSVAVAVGDARLPKLATTQKVPTMPVAE
PLCRNPNGRAPKGKPGGGKKLPHDGCQGEACGSTPGTQSSPNTVAKNLGLLPKKRNRKGK
AAALGIAKAPLSPALPLPLPRERVAGTGGAEEAPREKKPKTEEKEAGSSDGPPEGRSAAG
PARGPKPRANHSNYNGYSKRQRKRLGHGKAKAVPARCKSRGKRRRQPQQAPLLHPAEPEI
RLKYISCKRLRADSRAPPFAPYVRVERRGEFSTTCTVVNSPGDEARLQRGPAGPAPRPRA
ALPASSTMHMGPVVSKALSAACLVCCLCRNPANYKDLGDLCGPYYPEDCLPKKKSRLKEK
ARAEGPGEDSTVPSAAERAPRGPEGGCGKAARPEGAAEAAKQSALRSSPRGMFRRLQSCY
CCDERTEGEEAAEKPRRHECHKAESPPQEPAGDTQEHWLHEACAVWTAGVFLVAGKLYGL
QEAVKAAADLKCSSCQQAGATVGCCQKGCPHTYHYACAVDTGCLLTEESFSLRCPKHKRQ
PV
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccaacagagctaccagccgact
tcacaagatacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgc
gagcggcagaggctggtggcgaaggagtactacagtcagcagcagctgccatacacaggc
tatgagaacagcgccgtggagaaataccaccggggaaacaagcaattagcggggcagcag
ctgcagggcaggccggccttttccaattacaccgtgcaggagaacagcccttatccagcc
cggtattccggggacgagagcctgcaggcatggggtggccagccacaggcactgcccggt
ggcgtggccaagtacgaggacaacctgatgaagaagacagtggcgttggcaggtgggcgg
ccgtaccatgagccggcggccacctcgctgcccttccggactcacttccagcagcagcca
cagcagcagcagcagcaacagcagcagcagcaacaacagcagcagcagcctcccgcactc
ccctaccccaagctgcagagacagaaactgcccaacgatgtctcctcacccatgcccttc
tcacagagccctcactttgggcagcactcccagtccttccctgcctcctccacctactcc
tcggtgcctgggggcagtcagccggcacactcctacaagagctgcacggcgccctcgggg
cagccgccgctggagcggcccctgggaagcgctgccagcttggcccctggcccccgcgtg
cccaacctgcacggctaccagcccaaccgcattggctacgagcagcccccgcagccaccg
ccgcagcccccgcagccgccaccgccgcagcccccgcagccaccacagcccccgcagccc
ccgcagcccatgcaggggcggcatcacgcttcggagaccctccactaccaaaacctggcc
aagtaccaacattacaaccagccaggccagacctactgccagggcgatgcgccacccgtc
cggacgccggagcagtactaccagaccttcagccccagtgccagccactcgccagctcgt
tccgtcggcaggtccccgtcctacagctccactccctcccctctgatgcccaacctggag
aacttccaatacagccagcagccgctgaatgccggtgcctttccggccggcattgctgac
cacagccatttcatgccgctgctgaacccttctcccactgatgggacgagccctgacact
caatccgggaactgcaaaaacttgcagaaggagaagctgcccgaaaacctgctgtcagat
ctgagcctgcagagcctgacagcactcacctcccaggtggagaacatctccaacactgtc
cagcagctgctgctctccaaggcagctgtgccccagaaaaagggcatcaagaccccagcg
aggacccccgagcagctcaaggggcagcactgcagtcctgagagcagcacctactcggca
gagcaggtggggactcccctgtccgacccgctgagcaccccccagtctgtccatgctgag
acacaggatgctgactatctcagtgggtcagaggaccagctggagaggagcttcctgtac
tgcaaccagaaccgcagccctgcccgcgtcaacagcaactccaaggcaaagcctgagtca
gtgtccacgtgctctgtgacctctccagacgacatgtccaccaaatcagatgactccttc
cagagtatccacgccaccctgcccctggagaccttcaccaagtatgtgagcaatgaacgg
gactgcccccgactgctcctcagcgccctgtcccaggaagagctggcttctgagatcatc
gttctgcaggatgctatcagtgagaaggcagacaaagcctgggccaacttgcccatgctg
ggcaaggagaccaccaagtcccccttccagctggagaaccaccggcccagcctggactct
atggtgaaaggtgcctggcccagccagggtgactccagcacgcttactgagcccctcaag
ctggacaaagcttcaggggccagcacggggaaggactttagtgaggaagtgtacgagggt
ccccaggtggagtttgcagccaccgaaagcaaggatgtgctgaaggacactgctccactg
gccttcaactccaagtccagcatcccagcagcgacatcaagcgcaggggccaccagctac
agctgctactcaaacaccactgccaactcggtggcgtctgagaatgccatggagcatttt
gagtggccagaggagagcctgggtgaggcctgcctgcggtggaaggatctccaggccact
gacctccccaagggcttatttcccagcaaattggtgagctcttgcaaggagaaaaaaaac
gcctgcggcttggacctgtgcgatggagagcagccagccaagagtgagacggtccaggac
tttggccagcaggtgatagaggaggaggaggagacactgacctatgatgaagcaacaaag
gcggacagcgagaggtggctgcaggacactcggcactgctgctcagctggggactttagt
gagatccccatcatctcctcgccagatctgaaggagtcagacctggaggcagaggagtac
tcctcactctgtgagctggctggctcggagcagaagtcagtgacatacgatgcctcacca
cccaagcccccggagatgccagccgtattatcctccagcgaggtgcctgtgtcggccgag
gagactgtcagcacagtggagaaggagagctcagctcccaccccacgcctctctggccag
tctgtcatcctgctgggccctgctgtgggtacggagaccaaggtgaagagctggttcaaa
tcctccctgccccacatccagcctgaggaggagaatggtggaggggagacatcccacctg
gaggcagccagtgctgagtccacctcatccgtcatggtgaagcaacaacttacgcccgaa
aatgtgctggggaagatggagcctgtctcacggggcaagagcctccgcaataagagggtc
cactgccggctgtcagaggggagtggccctggcagcaccgtgctgagtccatttgatgag
ctgccagcagccagcagcgtggccggtgcctgcctggggccagatggacagacagaggta
ccgagcaagagcacccagagccaaacaccccggtttccagccgagggtctgccggcacgc
atgtgcacccgctccttcactgccctggctgagccccgcgcccctgccccgctggaggga
ctgaaggctcccacgcaccaggagaagctggggaagaaacccggctgtggagtgaagcag
agggtggctttcaaaaccaggaagcgcaacagccggccagccccgagggtggtccaaaat
gccagcgataccaccctcttggtgcccgggttggtggcagcagaggaggtggcagggccg
acaccactggagggagacgcggtggaatccggggagagggaccagcggtcgatgatcctg
cgctcccggacgaagacacaggaggtgttctacaccaagcggcagaggggcaagcgggca
gctgatgtccggctgaagaactgcaaagcgcccaaaaagctcatatccaacaaccacctc
ccacctgccttcaagctgccagcgccgggcagccctcacaaggagggcaaggtgggtgcc
cggatgaagctgcccaaagcagggccgggcgtggggggcaagatgtcagagcggccactg
cactcactgaagaggaagtccaccttcatctcccccatccccaccaagaagaggaacctg
gtcctgcggagcaacagcggcggcgtgaaggaagagaagccagagggtccccccagcctc
ttcaagaagatgccggtggccaaaaaggtgaaagccaagctgccccccaagaactctggt
gaagccatcccgaagcaccccctgccaaaggaggccccagatgtctgcatcaagatcacc
tcccgggcggccttccaggaggccaccaagaccaaagtgctgcctccccgcaagggccgc
ggcctcaagctggaggccattgtccagaagatcacctcacccaacctgaagaagttcacc
tgcaaaccagcagccacagcagtggcagccacagtagctgcctatggctcctccctgagc
ccggctggggcggagcgggagcgggtggtgaagcacagcagcgtggctgtggcggtgggt
gatgcgcggctgcccaagctggccacaacacagaaggtgcccacaatgccggtggctgag
ccgctctgccggaaccccaatggccgagcaccaaaggggaagccaggtggtgggaagaag
ctgccccatgacggctgccagggggaggcttgtgggtcaacaccggggacccagtccagc
ccaaacacggtggccaagaatctggggctcctgcccaagaagaggaaccgcaagggcaaa
gcagcagcgctgggcatagccaaggcacccctgagccctgcactgccactaccactaccc
cgggagcgtgtagccggcacgggtggtgcggaggaggcgcctcgggagaagaaaccaaag
actgaggagaaggaggcggggagcagcgatggcccccctgagggacgctccgccgccggg
ccggcgcgggggccgaagccgcgggccaaccactccaactacaacggctactccaagcgg
cagcggaagcggctgggccacggcaaggccaaggcggtgccggcgcggtgcaagagccgc
gggaagcggcggcggcagccccagcaggctccgctgctgcaccccgccgagcccgagatc
cggctcaagtacatctcctgcaagcggctgcgggcggacagccgcgccccgcccttcgct
ccctacgtccgcgtggagcggcgcggagagttcagcaccacctgcaccgtcgtcaattca
cccggcgacgaggcgcggctgcagcggggaccggccgggccggcgccgcggccgcgggcg
gccctgcccgcctcctccaccatgcacatggggccggtggtgtcgaaggcgctgagcgcc
gcgtgcctggtctgctgcctctgccgcaaccccgccaactacaaggacctgggggacctc
tgcgggccctactaccccgaggactgcctgcccaagaagaaatcccggctgaaggagaag
gcgcgggcggaggggccgggcgaggactccaccgtgccctccgcggccgagcgggcgccc
cgcgggcctgagggcggctgcgggaaggcggcgcggcctgagggggctgccgaggcggcc
aagcagagcgcgctgcgctccagcccgcggggcatgttccgtcggctgcagagctgctac
tgctgtgacgagaggacagagggcgaggaggcggccgaaaagccccggcggcacgaatgt
cacaaggccgagtccccgccgcaggagccggcgggcgacacgcaggagcactggctgcac
gaggcctgtgctgtatggaccgctggggttttcctggtggcggggaagctctatgggctg
caggaggctgtcaaggcggctgccgacctgaagtgctcgagctgccagcaagcgggagcc
acggtgggctgctgccagaaggggtgtccccacacctaccactacgcgtgtgccgtcgac
acaggttgcttattaactgaggagagcttctctctgagatgtcccaaacataagaggcag
ccggtgtag
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