Cinclus cinclus (white-throated dipper): 134050615
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Entry
134050615 CDS
T10813
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03420
Nucleotide excision repair
ccic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
134050615 (ERCC4)
03460 Fanconi anemia pathway
134050615 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccic03032
]
134050615 (ERCC4)
03400 DNA repair and recombination proteins [BR:
ccic03400
]
134050615 (ERCC4)
DNA replication proteins [BR:
ccic03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
134050615 (ERCC4)
DNA repair and recombination proteins [BR:
ccic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
134050615 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
134050615
NCBI-ProteinID:
XP_062359760
LinkDB
All DBs
Position
16:9709690..9723621
Genome browser
AA seq
905 aa
AA seq
DB search
MAALLEHESQIFLELFHRDGLVVCARGLGIDRLLLRFLRLYCEPANLVLVLNTSPAEEEY
FIDQLRSDGVVHLPRRVTNEIANNTRYEFYTQGGVIFATSRILVVDFLTDRIPANLITGI
LVYKAHRIIESCQEAFILRLYRQKNKQGFIKAFTDNAVAFNTGFCHVERVMKNLFVGKLY
LWPRFHIAVHSFLEKHKPEVVEIHVAMTPAMLAIQTAILDILNACLRELKRYNPALEVED
LSLENAIAKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKVLRTLLLYLTQYDCVTFLNLLE
SLKASEKAFGENSGWLFLDSSTSMFVNARARVYRIADEKLNQKGKGSGSEKREVKKETEL
KRELVLESNPKWEALREVLKEIENENKNSDNLGGPGQVLICASDDRACAQLREYIIAGAE
AFLTRLYNKTFGKDEKAGEVWIKDRKVIKSKGNAKPDTGPQVKKAKLTASSKQNKHKKQQ
DRTIIQMIGKTEEEKREEFEVGDNKELSDSQEGNTEETIPEDFDVNLPSDCYYGIFKDPL
TIIHPLQGCGDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYKASRPGKPLRVYFLIYG
GSTEEQRYLTALRKEKEAFEKLIREKASMVVPEEREGRDETNLDLLRDARPASVSADTRK
AGGQEQKGVQQTIIVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTPDICVERKSISD
LIGSLNNGRLYSQCVSMCRYYKRPVLLIEFDPNKSFSLIPRGSLQPEISSNDVTSKLTLL
TLHFPKLRILWCPSPHATAELFEELKQNHPQPDAETAMAITADSEILPQSDKYNPGPQDF
LLKMPGVNAKNCRALMTHVKSIAELVTLSKDELAKILGNATSATQLFDFIHLTCAEALAK
GKSKR
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctggagcacgagagccagatcttcctggagctgttccaccgcgacggg
ctcgtcgtgtgcgcccgcgggctcggcatcgaccgcctgctgctgcgcttcctgcgcctc
tactgcgagcccgccaacctcgtgctcgtgctcaacaccagccccgccgaggaggagtat
tttattgatcagctgaggtcagatggagttgttcatctccctcgacgcgttaccaatgaa
attgcaaataatactcggtatgaattttatacacaaggaggagtcatctttgcaacaagt
cggatccttgtggtagatttcctcactgacagaattcctgccaatctcattaccggcatt
ttggtgtacaaagcacacagaatcattgagtcttgtcaggaagcgttcatcttgcgactt
tatcgccagaagaacaagcaaggcttcattaaagcttttacagataatgcagttgcattt
aacactggcttttgtcatgtggaaagagtaatgaaaaatctttttgttgggaagctttat
ctgtggccaagatttcatatagcagtgcactcctttttagagaagcataaacctgaagtg
gtggaaatacatgtggcaatgacccctgctatgcttgctatccagactgcaatcctggac
attctgaatgcatgtctgagggaactcaaacgttacaacccagctcttgaagtagaagat
ctatctttagagaatgctattgctaaacctttcgacaagacaatacgtcactatttagat
cctctctggcatcagcttggagctaagaccaagtctttggtccaggatttgaaggtcctt
cgtactttgctactgtatctaacccagtatgattgtgtcactttccttaacctcctggag
tcactgaaagcaagtgaaaaagcttttggtgagaattcaggctggctgttccttgactcc
agtacttcaatgtttgtgaatgctcgagctcgagtttatcgcattgcagatgagaaactg
aatcagaaaggcaaaggctcaggctctgaaaaacgtgaagtaaagaaggaaactgaactg
aaaagggaattggttctagaaagtaacccaaaatgggaagctttgagagaagtactgaaa
gagattgaaaatgagaataagaacagtgacaaccttggtggtccagggcaagtgctcatt
tgtgccagtgatgaccgagcctgtgcacagctcagggagtatattattgctggagcagaa
gcttttttaacaagactatataacaaaaccttcggaaaggacgagaaagctggagaagtg
tggattaaggacagaaaagtcattaagtccaaaggaaatgccaaaccagacacagggcct
caagtcaaaaaagccaaactcactgcttcttcaaaacaaaataaacacaagaagcagcaa
gaccggactataatccaaatgatagggaaaactgaagaggaaaaaagagaggaatttgag
gtgggagacaacaaagaattaagtgatagccaagaaggcaacacggaagagaccattcct
gaagattttgatgtgaacttgccctcagattgttactatgggattttcaaggacccgctg
acaattatccacccgctgcaggggtgtggggatccctacgcgctcactcgggtgctgcat
gaagtggaacccagatatgttgtgttgtatgatgcagaactcacttttgttcggcagctg
gaaatctacaaggcgagcaggcccgggaagcctttgagagtttatttcctcatatatggg
ggctccacagaagagcagcgctacctcacagctctgaggaaagagaaggaggcctttgaa
aaactcattcgagagaaggccagcatggttgttcctgaagaaagagaaggaagagatgaa
acaaacttagacctcctcagagatgctagacctgcctctgtctctgctgacacgcgcaaa
gcaggtggacaggaacagaagggtgttcagcaaaccataattgtggatatgagggaattc
cgtagtgagcttccatcactgatccatcgccgtgggatagacattgagcctgtgactttg
gaggttggggattatattctgaccccggacatctgtgtggagcggaagagcatcagcgat
ctcattggttccttgaacaatggcaggctgtactcacagtgcgtgtccatgtgccgctac
tacaagcggccggttctcctcattgaatttgatcctaacaaatccttctccttgatccca
cgtggctctttacagccagaaatttccagtaatgatgttacttctaaactaaccctcctc
acactgcacttcccaaagttacgaatcctgtggtgtccctctccgcacgctactgctgaa
ctgtttgaagaattaaaacaaaaccatccccaacccgacgcagaaacagcgatggccatc
accgcagattccgaaattctccctcagtcagacaagtataaccctgggcctcaggacttc
ctgctaaaaatgccaggggttaatgcaaaaaattgtcgtgccttaatgacccatgttaaa
agcatcgcagagctggtgacactgtccaaggacgagctagccaagattttgggtaatgct
accagtgccacacagctctttgactttattcacctgacctgtgcagaggcactagccaaa
ggaaaaagcaaaagatga
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