Cinclus cinclus (white-throated dipper): 134050657
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Entry
134050657 CDS
T10813
Symbol
SMURF1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04120
Ubiquitin mediated proteolysis
ccic04137
Mitophagy - animal
ccic04144
Endocytosis
ccic04340
Hedgehog signaling pathway
ccic04350
TGF-beta signaling pathway
ccic04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134050657 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
134050657 (SMURF1)
04350 TGF-beta signaling pathway
134050657 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134050657 (SMURF1)
04137 Mitophagy - animal
134050657 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
134050657 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134050657 (SMURF1)
04121 Ubiquitin system [BR:
ccic04121
]
134050657 (SMURF1)
03029 Mitochondrial biogenesis [BR:
ccic03029
]
134050657 (SMURF1)
Enzymes [BR:
ccic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
134050657 (SMURF1)
Membrane trafficking [BR:
ccic04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
134050657 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
134050657 (SMURF1)
Ubiquitin system [BR:
ccic04121
]
Ubiquitin ligases (E3)
HECT type E3
134050657 (SMURF1)
Mitochondrial biogenesis [BR:
ccic03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
134050657 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
134050657
NCBI-ProteinID:
XP_062359850
LinkDB
All DBs
Position
16:3156789..3198051
Genome browser
AA seq
729 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPTDTDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENEGTVYEDSGPGRPLSCFMEEPA
PYTDTTGAAGGGGCRFLESPSQDQRLQAQRLRTPEVRAHVQTPQNRPHGHQSPELPEGYE
QRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVDH
NNRTTQFTDPRLHHIMNHQCQLKEPSQQPLPAPNEGSLEEGEELPAQRYERDLVQKLKVL
RHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAR
EWLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHY
INGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRI
LQHELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQ
KELELIIGGLDKIDLNDWKSNTRLKHCMADSNIVKWFWQAVETFDEERRARLLQFVTGST
RVPLQGFKALQGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAV
EETCGFAVE
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcccggtacccgccggaacggatccagcatcaagatccgcctcacagtatta
tgtgccaagaatctcgcaaagaaagatttcttcagacttcctgacccatttgctaaaata
gttgtggatgggtcaggtcagtgccattccactgacactgtgaagaacacgttggacccc
aagtggaaccagcattacgatctatacgttgggaaaacagattccataaccatcagtgta
tggaaccataaaaaaatccataagaaacagggagctggcttcctggggtgtgtccgactc
ctctccaatgccatcagcaggctaaaagatactggataccagcgtttggatctatgcaaa
ctcaaccccacagacaccgatgctgtccgaggccaaatagtggtcagtttacagacacgg
gacagaataggcacaggaggttctgtagtagactgcagagggcttttggagaatgaagga
acggtttatgaagattctgggccggggaggccactgagctgcttcatggaggagccagcc
ccgtacacggacacgacgggagcggcgggaggaggcggctgccgcttcctggagtctccc
agccaggaccagagactgcaggcccagaggctccgcacccccgaggtcagagctcatgtc
cagacacctcagaacaggccccacggccaccagtcacctgagctacctgaaggctacgag
caaagaacaacggtacagggacaggtttattttttgcacacacagactggagtgagcacg
tggcacgacccaaggataccaagagaccttaacagtgtgaattgtgatgaactgggacct
ttgcctccaggctgggaagtcagaagtacagtttcaggaagaatatattttgtagatcat
aacaacagaaccacacaattcacagatccacgactacatcacatcatgaaccatcaatgc
cagctaaaagagcccagccagcagcctctaccagctccaaatgagggatcattggaagag
ggtgaggagttgcctgcacagagatatgaaagagacttggtacaaaagttgaaagttctt
agacatgagctgtctcttcagcaacctcaggctggtcactgtcgcattgaagtatccaga
gaggaaatatttgaggaatcctatcgtcagataatgaagatgaggccaaaggacttgaaa
aagaggcttatggtgaaattcagaggagaggaaggcctggattatggaggagtagcaaga
gagtggttgtatttactgtgccatgaaatgttgaatccctactatggactcttccagtac
tccacagataacatttacatgctgcaaatcaatccagactcttctatcaatcctgaccat
ttgtcttatttccattttgttggtcggataatgggtttggctgtgttccatggacactat
atcaacggggggttcacagttcccttttacaaacagctgctggggaagcccatccagctc
tccgatctggaatctgttgacccagaattacacaaaagtttagtctggatcttagagaac
gatatcacgccagtcctggaccatacattctgtgtggaacacaatgccttcgggaggatt
ttacagcatgaactcaaaccaaatggcaggaatattccagtgacagaagagaacaagaag
gaatatgtcaggctgtacgtgaactggaggttcatgagaggaatagaggcacagttcctg
gctctgcagaaaggttttaatgaacttattcctcaacatctccttaagccttttgaccag
aaggaacttgagctgatcataggaggcctggataagatagacctgaatgactggaagtcc
aacacccgcctaaagcactgcatggctgacagcaacattgtcaagtggttctggcaagca
gtggaaacgtttgatgaagaaagaagggcaaggctgctgcagtttgtgacgggctcgacg
cgtgtcccacttcaaggtttcaaggctttacaaggcgctgcaggacccagactgtttacc
atccatttaatagatgcaaacacagacaaccttccaaaagcccacacttgctttaaccgg
atcgacattccgccttatgagtcatacgagaagctttatgagaagctgttgacagctgtg
gaagagacatgtgggtttgctgtggaatga
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