Cinclus cinclus (white-throated dipper): 134050671
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Entry
134050671 CDS
T10813
Symbol
TMC5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccic02000
]
134050671 (TMC5)
03037 Cilium and associated proteins [BR:
ccic03037
]
134050671 (TMC5)
Transporters [BR:
ccic02000
]
Other transporters
Pores ion channels [TC:
1
]
134050671 (TMC5)
Cilium and associated proteins [BR:
ccic03037
]
Other cilia and associated proteins
Stereociliary proteins
134050671 (TMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
134050671
NCBI-ProteinID:
XP_062359872
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Position
16:complement(7923630..7938647)
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AA seq
875 aa
AA seq
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MSYYYNEAFENPDYHFSETLEIGRRGSSQRNPLSHQTPHDLSLHGSYGEHRGREQNYPVA
IPMASLGPGSDYSQDLPSTSPYGNFTDNISFEPEPELTYTPHSTFHLLDYPYTHGISSGS
EDSFIRRRNRRPPDEIFMTSASMFETDPVCSEEEDLVRSLASMSTKERIKVIQKMPETMR
KKREIRNKVLKEVSKISNRGAQPSCCTQCLKGAAVSFRRFGNTLSEHFHQLRVWHKTLKI
IGAEFGTSVLSYFVFLTWLLNFNIFSFLINFSFITIPQFLAAEPNNLSFTGLELFTGAGY
FQQTVLYYGFYTNATITKIQNGPSYNMQLAYIFTVGIYFVICFLILLFSMAKFFSRNFIN
PQELSVNASKLLCTWDFSITNEKAVKLKQKNLHTQIKEGLTEVNKEVLNFSAMERVLRIA
VHLLAWVASLGIAVAACAGVYFLSINNLKLFMKEHRNDLESQTAMLVLPVVVSLLNTLIP
FLFSWIGHLESFQTPGQHIYVTITRNVILKMSIVGILCYYWLNIVATSESQCWETLVGQD
IYRLVLVDFIFCLLGSFFGEFLQRIIGTTVCLSLGLPEFDIGRNVLDLIYAQTLTWIGIL
FSPLLPGIQMIAFFIVFFVKKVSLMRNCQPPRKVWRTAQMMTSFIFLLFCPSFLGVLSVI
GVTVWRLKPSEGCGPFRGLPSMYAAVAEWIQVLGSYTVSKWVVWIYHNLITSELFFFILS
TFVLIVTYLYWQIIQGRKTMTKLLRKQINNAGNDKKFLLKKLQTQQRARRSSSALGGRGQ
QRSSSSYHPSRQPAQEVPDYLERAFERNQNTSYNEHPFSVGISSSSDFLPARLTLFALCP
AGCEPGASRAAALALRAREAALQRDSDGSHRGFRT
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgtcttattattacaatgaagcctttgaaaatccagactaccacttctcagagacactg
gaaattggtagaagggggagttctcagaggaatccattgtctcaccaaactcctcatgat
ttgtctctgcatggatcctatggagagcacagaggaagggagcagaactaccctgtggcc
attcccatggcctccctgggacctggctctgactacagccaggatttacccagcacaagt
ccatatggaaatttcacagacaatatttcctttgagcctgagccagaactgacttacacc
ccacattctaccttccatctgctggattatccttatactcatggaatttccagtggatca
gaagacagcttcattcggagacgcaaccgcagaccacctgatgagatcttcatgacttct
gccagcatgtttgaaacagatccagtgtgcagtgaagaagaagatttagttagaagtctt
gcaagtatgtccaccaaagaaaggattaaagtaatccagaagatgccagagaccatgagg
aaaaagagagagatcagaaataaagttcttaaagaagtatcaaaaatatcaaaccgtggt
gctcaaccttcctgctgtacacagtgcctgaaaggagcagcagtgtcatttcggcgattt
ggaaataccctttcagaacactttcaccagctgcgggtatggcacaagactctgaagatc
attggtgctgagtttggaacaagtgttctttcttactttgtgttcttgacgtggctgcta
aattttaacatcttctcattcctcataaacttcagtttcatcacaattcctcagtttctt
gcagcagaaccaaataacctttcattcacgggcctggagctgttcactggagctggttat
tttcaacaaacagtgctctactatggcttttacaccaatgctacaatcactaaaatacag
aatggtccatcttacaacatgcagctggcctatatttttactgttggaatatattttgtc
atctgttttcttatcttgttgttcagcatggcaaaattcttctccaggaacttcattaac
cctcaggaattatctgtgaatgctagcaagctgctctgcacttgggacttcagtataact
aatgaaaaagctgtgaagctgaaacaaaagaatctccacacacaaataaaggaaggcctc
actgaagtaaacaaagaagttctaaatttttctgcaatggagagagttcttcgtattgct
gttcatcttcttgcttgggttgcttccctgggaatagcagtagctgcttgtgctggtgtt
tatttcctctccattaataacctcaagctgtttatgaaagagcacagaaatgacctagag
agccaaactgccatgttggtgttacctgtggttgtatctctcctcaacacattgatccca
ttcttattttcctggattgggcacctggagagctttcagactcctggacagcacatatat
gtcactattaccagaaatgtcatcctgaaaatgtcaattgttggaatactgtgctactac
tggcttaacatcgtggctacctcagagtcacagtgctgggaaactttggttggccaagat
atctatcgtcttgttctagttgacttcatattttgtttgcttggctctttctttggagag
tttttacaaagaattattggaactacagtctgcctgagcctggggctgccagaatttgat
attggacgaaatgttttagatttgatctatgctcagactttgacctggattggtatcctg
ttctcacctctgttgcctggtatccagatgatagcattttttatagtattttttgtgaaa
aaggtcagtctgatgaggaattgccagccccctcgcaaagtctggagaactgctcaaatg
atgacatccttcattttcctgctgttttgtccttccttccttggagtcctgtcagtcatt
ggagtcactgtctggaggttaaagccttcagaaggatgtggtcctttcagaggtttgcct
tctatgtatgctgcagtcgctgagtggatacaagtactgggaagttacactgtctcaaaa
tgggttgtgtggatctaccataacttaattacaagtgaacttttcttcttcatcctctct
acttttgtactaattgttacttatctttactggcaaataatacaaggaagaaagaccatg
accaagctgttacgtaagcaaattaataatgcagggaatgataagaagtttctactcaaa
aagctacagacacagcaaagggcaagacgaagctcatctgcactgggaggaagaggccag
cagagaagctcttcttcataccacccatccaggcaacctgcccaggaggtgccagactac
ctagaaagggcatttgaaagaaatcaaaacacatcctacaacgagcatcccttttctgtt
gggatctcaagcagcagtgactttctaccagcgcggctgacgctgtttgccttgtgcccg
gcaggctgcgagcccggcgcgtcccgggccgcggcgctcgccctgcgcgccagggaagcc
gcgctgcagcgggacagcgatggcagccacagaggattccggacctga
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