Cinclus cinclus (white-throated dipper): 134050779
Help
Entry
134050779 CDS
T10813
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
KO
K23625
ataxin 2/2L
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
134050779 (ATXN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134050779
NCBI-ProteinID:
XP_062360079
LinkDB
All DBs
Position
17:complement(3575363..3624920)
Genome browser
AA seq
1107 aa
AA seq
DB search
MSLKQAAAAAQPAGNNRKPPGGGGPGLPSAAGRQNMGRGRSSGKGPPQPTISFDGIYANM
RMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVVDAAHRKTAESSLGPKREDILE
SILFKSSDFVMVHFKDMDTNYARRDAFTDSAISAKVNGEHKEKDLEPWDGGENTASEELE
ALETDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARATQLAE
EIESSAQYKARVALENDERTEEEKYTAVQRNANEREGHGVNTRENKYIPPGQRNRDVLSW
GSGRQNSPRMGQSGSGPPISRSGSHTSEFSPNSGADQRVVNGGVPWPSPCPSPSSRPPSR
YQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPK
AQRHPRGHRVSTGRGTISSGLEFVSHNAPGEASTAAVARGSPSGGTWSSVVSGVPRLSPK
THRPRSPRQSSTPMGPALPSPQPGTIPTESVAMPVPAASPTPASPASNRAVTPSNEAKDT
RLQDQRQNSAAGNKENIKPSETSPSFSKPENKGVSPIVSEHRKQIDDLKKFKNDFRLQSS
SSSDAVDQLLNKTREGEKSRDVVKEKTESTPKESIIEAGSNTNSNGGSSKPNSPSISPSM
SNSSEQKRGPEVTSQGVQTSGPGSKQDKEDKEEKKDTSEQVRKSTLNPNAKEFNPRSFAQ
PKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTP
MPVNQAKTYRAGKVPNMPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQQF
PNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPAHAQPGLVSSSATQYGAHEQTHAMYA
CPKIPYSKETGPSFYFAISTGSLAQQYAHPNATLHPHPPHPQPSATPTGQQQSQHAGSHP
APSPVQHHQHQAAQALHLANPQQQSAIYHAGLAPTPPSMTPGSNTQSPQNNFPTAQQTVF
TIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSAL
QPIPVSTTTHFPYMTHPSVQAHHQQQL
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcaagcaagcggcggcggcggcgcagcccgccggcaacaaccgcaagcccccc
ggcggcggcggccccggcctcccgtcagccgcggggaggcagaacatgggcagaggccgc
agcagtggcaaaggaccacctcagcctacgatttcttttgatggcatctatgcaaacatg
agaatggttcacatactcacatcagttgttggatccaaatgtgaagtacaggtgaaaaat
ggtggtatatatgaaggagtttttaaaacctacagtcctaagtgtgatttagtggttgat
gctgctcatcggaaaactgcagaatccagtttggggccaaaacgggaggacatcctagag
agtatcttgttcaagtcttcagactttgttatggtgcattttaaggatatggataccaat
tatgccagaagagatgcttttactgattcagccatcagtgctaaagttaatggagaacac
aaggaaaaggatctggagccatgggatggaggagagaacacggcttctgaggagctggag
gcactggagacagatgtttctaatggatgggatcccaatgacatgtttcgttacaatgaa
gaaaattatggtgtagtgtcaacttatgacagcagtttatcttcttatacggtgccatta
gaaagagataattcagaagagtttttaaaacgggaagccagagcaactcaattagcagag
gaaattgaatcaagtgcccaatacaaagctcgggttgccttggaaaatgatgaaaggaca
gaagaagaaaaatatactgctgttcagagaaatgctaatgaaagagaaggacatggtgtg
aacactagagaaaataaatacattccacctggacagaggaacagagatgtcctgtcctgg
ggaagtggaagacaaaactcgccgaggatgggccagtctggatcaggcccaccaatctca
aggtctggatcccacacttcagaattcagccctaactctggagcagatcagagagtagtt
aacggaggtgttccctggccatcgccttgcccatctccttcctctcgcccaccttctcgc
taccagtcaggtcccaactctcttccacctcgggcagccacccctacacggccgccctcc
aggcccccctcgcggccctccaggcccccgtctcacccctctgctcatggttctccagct
cctgtctctactatgcctaaacgcatgtcttcagaagggcctccacggatgtctccaaag
gctcaacggcaccctcgaggtcacagagtctctactggtaggggtacaatttcaagtggc
ttagaatttgtatctcataatgcacctggggaagcatctactgctgcagtggcacgaggc
agcccttcaggtgggacgtggtcatcagttgtcagtggggttccgagattatcccctaaa
acacacaggcctaggtctccaaggcagagcagcactcccatgggaccagctctgccttct
cctcagcctggtaccattcccactgaatctgttgccatgcctgttccagctgcctctcct
acacctgccagccctgcatccaacagagcagtcaccccctccaatgaagctaaagatacc
aggcttcaggaccagaggcaaaattctgcagctggaaacaaggagaatataaagccaagt
gagacttctcctagtttttctaaacctgaaaacaaaggtgtctctccaattgtttcagag
catagaaaacagattgatgatttaaagaaatttaagaatgactttaggttacagtccagt
tcctcttcagatgcagtggatcagctgctaaacaaaacccgagaaggtgaaaaatcaaga
gatgtagttaaagaaaagacagaatccacccctaaagaatctatcatagaagctggcagt
aacaccaactccaatggtggcagtagcaaacccaacagtcccagtatttctccttccatg
agtaacagctctgagcaaaagcgagggcctgaggtgacctcccaaggtgtacagacatct
gggcctggaagtaaacaagacaaagaggataaagaggagaagaaggatacttcagagcaa
gttagaaaatcaacacttaatcctaatgctaaagagttcaacccccgatcttttgctcaa
ccgaaaccttctactacaccaacctcccctcgtcctcaagctcagcccagcccctccatg
gtggggcatcagcagccaacccccgtgtacactcagcctgtttgttttgcaccaaatatg
atgtacccggttccagtgagtccaggcgtgcagcctttgtatcctattcccatgacgccc
atgccagtgaaccaagccaagacatatagagcaggtaaagtaccaaatatgccccagcag
cggcaagaccaacaccaccagagcaccatgatgcatcctgcctcagcagcaggccctcca
attgtagctactccacctgcttactctacacaatatgttgcatatagcccccaacagttt
cctaatcagcctcttgtgcagcatgtgccacactaccaatctcagcatcctcatgtttat
agccctgtaatacagggcaacgctaggatgatggccccaccagcacacgcacagccgggt
ttagtatcttcctctgcaacacagtacggtgcgcatgaacagacacatgctatgtatgca
tgtcccaaaataccatacagcaaggagacaggcccttctttctactttgccatttccact
ggctcacttgcccagcagtatgcccaccctaatgctaccctgcacccgcatcctcctcat
cctcagccttctgccaccccaactggccagcagcaaagccaacatgctggaagccaccct
gctccaagccccgtgcagcaccaccagcaccaggctgcccaggccctgcacctggccaac
ccccagcagcagtcggcgatttaccacgcaggtctagctccaacccctccttccatgacg
ccaggctccaacacgcagtctccacaaaacaattttcctacagcacaacaaacagtcttc
accattcatccctcccatgttcaacctgcatataccaatccgccacacatggcccatgtc
ccccaggctcatgtacagtcaggaatggttccttctcacccaactgcccatgctccaatg
atgctaatgacgacacagcctcccggtggtccccaagccgccctcgctcaaagtgcacta
cagcccattccagtctcgacaacaacacatttcccctatatgacccacccttcagtacaa
gcccaccaccaacagcagttgtaa
DBGET
integrated database retrieval system
