KEGG   Cinclus cinclus (white-throated dipper): 134050800
Entry
134050800         CDS       T10813                                 
Name
(RefSeq) polyubiquitin-B
  KO
K08770  ubiquitin B/C
Organism
ccic  Cinclus cinclus (white-throated dipper)
Pathway
ccic03320  PPAR signaling pathway
ccic04120  Ubiquitin mediated proteolysis
ccic04137  Mitophagy - animal
ccic04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ccic00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    134050800
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    134050800
   04137 Mitophagy - animal
    134050800
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    134050800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccic04121]
    134050800
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccic04147]
    134050800
Ubiquitin system [BR:ccic04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   134050800
Exosome [BR:ccic04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   134050800
  Exosomal proteins of other body fluids (saliva and urine)
   134050800
  Exosomal proteins of colorectal cancer cells
   134050800
  Exosomal proteins of bladder cancer cells
   134050800
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5 Dsc3_N OTU1_UBXL
Other DBs
NCBI-GeneID: 134050800
NCBI-ProteinID: XP_062360136
LinkDB
Position
17:1757010..1758316
AA seq 229 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN
NT seq 690 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtcaagactctgacgggcaagaccatcacccttgaggtcgagcccagt
gacaccattgagaatgtcaaagccaagatccaggacaaggaaggcatccctcctgaccag
cagaggttgatctttgctggcaagcagctggaagatggccgtaccctctctgactacaac
atccagaaagaatccactcttcacctggtgctgcgcctcaggggtgggatgcagatcttt
gtgaagaccctgacaggcaagaccatcacccttgaggtcgagcccagtgacaccattgag
aatgtcaaggccaaaatccaagacaaggaaggcatccctcctgaccagcagaggttgatc
tttgctggcaagcagctggaagatggccgtaccctctctgactacaacatccagaaagaa
tctaccctgcatctcgtgctgcgcctcaggggtgggatgcagatctttgtgaagaccctg
acaggcaagaccatcacccttgaggtcgagcccagtgacaccattgagaatgtcaaggcc
aaaatccaagacaaggaaggcattcccccagaccagcagaggctgatctttgctggcaag
cagctggaagatggccgtaccctctctgactacaacatccagaaggagtcaactctgcac
cttgtcctgcgcctgcggggtggtaactga

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