Cinclus cinclus (white-throated dipper): 134050824
Help
Entry
134050824 CDS
T10813
Symbol
DENND3
Name
(RefSeq) DENN domain-containing protein 3
KO
K20162
DENN domain-containing protein 3
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134050824 (DENND3)
Membrane trafficking [BR:
ccic04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
134050824 (DENND3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
WDR55
WD40_2
WD40_Prp19
Beta-prop_EML
uDENN
dDENN
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR75_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
134050824
NCBI-ProteinID:
XP_062360191
LinkDB
All DBs
Position
1:148046781..148078740
Genome browser
AA seq
1270 aa
AA seq
DB search
MEDVLPSGLLEICLLVGAPTERVRALLQGTQRKLRNLPPLDPEVLSVFVPPFISRDDVQV
INAGNNFNKSKRRSFRKKKERPKIEDVKTLNGEQKAPDTEDVVVPKDIDLIALPQLCFPG
GLYVTSESKDDHIHFLVFTDVCGNRTYGVVAQYYQSMQDGSTSSNGQGHWESAQTGKVPV
CFVPCAVCVISRYPYFSALKDCLSCLLVQLRPFRDLHVEEHIKEFAAKLFLIPSPPPGPL
HLVFHMKPLQIIIPSREDPDSPIIDLDLHLPLLCFKPEQVLQIMTCILTERRIVFFSSDW
ALLTLVAECFMLYLHPLQWQHTFVPILSRQMLDFVMAPTSFLMGCHIDHFDEVSTEGEDL
ILINIDNGDISHSKMVEEELEIADVPAQAAETFMKRVEGLQLHFDLELCHLRASTDLGEL
QTRRRAWQQKLNMDVQQTMLQLIVNIFREVKDHLNYEHRVFNSEEFLKTRATGDQPFYKK
VLETYMFHSFLKARLNRKMDAFARLDLSTQSEEDRLDLMFPTPRRLTIEKMASKRISAER
KASRRMVISMPNLQDIQLPEGPARNSSLRKVGTRVAVRTPSKSITTFKIPEIHFPLMFQC
VHSYYTDFFNHLSKAISTLPPENSALLARYFYLRGLVSLMQGKLLNALSDFQNLEKTDLR
IFPTDLVRKIVETLPRSERLQADRKPELKRLISRVMEKQREVLKIDDHVKNFELPKTHMQ
LDDFVKRIQESGIVRDVDTIHRLFDALTVGQQKQIDPETFRDFYNYWKETEAEAQEVNLP
PAVIEHLDKNECVYKLSCSVKTNYGVGKIALTQKRLFLLTEGGRPGYVPIAAFRDIEDVK
STTVAFLLLRIPTLRIKTLHKKEVFEANLKTECDLWYLIVKEMWAGKKMAYDHKDPQYIQ
QALTNVLLMDAVVGALQSSKSIYAASKLSYFDRMKNEVPMMVPKTTSETLKHKINPSAGE
TFPQAIDVLLYTPGHLDPSERLDNAHPKLWCALNEGKVVVFDASTWSIQQHCFKMGRSKL
TCMVMVEQSQVWIGSQDSIIYIINTYSMSCNKQLNDHRSDVTDIIVKKKNGTSSSEAYSS
SLDGMVIAWNISTLKVNRVFQLPCQNLTSMKLHDDQLWCCTRSCILVVSIHEFQLQMKIE
HHLRDMCSSFLGFQLFPERDEVWVSYSGSSDLYVWNTKDLSSTPQKIHLQDCSEITCMIR
VKNQLWVGSSGRLQGKSKGKIYVVSAERKSVDKELVGHADAVKALCSAEDRYVLSGSGKE
EGKIAIWKAG
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgtgctgccctcgggcctgctggagatctgtctgctggtcggtgcgcccaca
gagcgggtgcgggcgctgctccagggcactcaaagaaaactcagaaatcttcctcccctc
gatccagaagttctttctgtatttgtgcctccgtttattagcagagatgatgttcaggtg
attaatgctggtaataatttcaataaaagcaaacgccggtccttccgaaagaaaaaagag
aggcccaagattgaagatgtcaagaccctcaacggggagcagaaagcacctgacacagaa
gatgtggttgttccaaaggatattgatcttattgctttgccacagctctgtttcccagga
ggactttatgtaacttctgaatcaaaagatgaccacattcatttcctggtcttcactgat
gtctgtggtaacagaacctatggtgttgttgcgcagtactaccagtctatgcaggatggc
tccacctcctccaatgggcagggccattgggaatctgcgcagactgggaaggtgcctgtc
tgttttgtgccctgtgctgtttgtgttatatccagatacccatattttagtgccctcaag
gattgtctctcttgcttactagtgcagctacgacctttcagggatttacatgtggaggag
cacataaaagaatttgcagcaaagctgtttttaatccccagcccaccaccaggaccactc
cacttggtatttcatatgaaaccacttcagataataattccttcacgtgaggatccagac
agtccaattattgacttggatctccatcttccattgctgtgtttcaagccagagcaggtg
ctgcagattatgacctgtattttgactgaacggaggatagttttcttctcttctgattgg
gctctgctgacacttgttgctgaatgctttatgctgtaccttcatcctcttcagtggcag
cacacttttgtgcctattctgtcccggcaaatgctggattttgtgatggctccaacgtct
ttcctcatgggatgtcacattgatcattttgatgaagtgagcacggaaggtgaagattta
attctaattaatatagataatggagatatttctcattcaaaaatggttgaagaggaactt
gaaattgcagatgttccagcacaagcagcagaaactttcatgaaaagagtggagggcctg
cagctgcactttgatctggagctctgccatctccgagccagcacagaccttggtgagctc
caaacccgcaggagggcttggcagcagaaactcaacatggatgtgcagcaaaccatgttg
cagttaattgttaatatcttcagggaggtaaaagaccatctgaattatgaacacagagtg
tttaacagtgaagaatttctgaaaacaagggcaactggagaccagccattctacaaaaag
gttttggagacctacatgtttcactctttccttaaagctcgtctgaacagaaagatggat
gcttttgctcggcttgacttgagtacccagtctgaagaagacaggttagatttgatgttt
cccacccccagaaggctgactatagagaaaatggcttccaaacgaatcagtgcggagcgc
aaggccagccggcgcatggtgatcagcatgcccaacctgcaggacatccaacttccagag
ggccctgccaggaactcctcacttcgaaaagtgggaacacgtgttgctgtgagaacgccc
tccaaatccatcaccacattcaaaatccctgaaattcactttcctctgatgttccagtgt
gttcactcctactacacagacttcttcaaccacctcagcaaagctatcagtaccttaccc
cccgagaactccgcgttgctggcaaggtacttctacctccggggccttgttagcttgatg
caagggaaactactaaatgcactttctgactttcagaacctagaaaaaacagacttaaga
attttccctactgatcttgtaagaaaaatagtggagaccctgcctcgctcagagcgcttg
caggcagaccgcaaacctgagctcaagaggctgataagtcgagtgatggaaaaacaaagg
gaagttctgaaaatagatgaccacgtaaaaaattttgaattgccaaaaacacacatgcag
ctggatgattttgtgaagagaattcaggagtctgggattgtcagggatgtagacactatc
caccggttattcgatgccctgacagtaggacagcagaaacaaattgatcctgaaacattc
agagatttctacaactactggaaagaaactgaagcagaagcccaggaggtgaatctgcca
ccagcagtaattgagcatctagataaaaatgaatgtgtctacaagttgtcctgctcagtt
aaaaccaactatggtgtagggaaaatagctctgacccagaagcgcttgttcctgttgact
gaaggaggccgtcctggctatgtcccaattgctgctttcagggatatagaggatgttaag
agcactactgtagctttccttcttttgagaatacctactctgaggattaaaacattacat
aaaaaagaagtctttgaagccaaccttaaaactgagtgtgatctctggtacctgatagtg
aaagaaatgtgggctggaaagaagatggcatatgatcacaaggatcctcagtatatccag
caagccctgacaaatgttcttctgatggatgctgtggttggtgccctgcagtcctccaaa
agcatctatgcagcctctaaactgtcttactttgacaggatgaaaaacgaagtgcctatg
atggtccccaaaacaacttcagagacactaaagcacaagatcaacccttcagctggtgag
acatttccacaggcaatagatgtcttgctttatactccaggtcatcttgacccttcagaa
agactggacaatgctcatccaaaactctggtgtgctttaaatgagggcaaggtggtggtt
tttgatgcctctacctggtctatccaacaacactgcttcaaaatgggccgctctaaactg
acgtgcatggtcatggtggaacagagtcaagtgtggattggttctcaggactccattatt
tatatcatcaatacctacagtatgtcttgtaataaacaactgaatgatcatcgctctgat
gttacagacatcattgtgaagaagaaaaatggaacatccagcagtgaagcatattccagc
agtttagatggaatggtgattgcctggaacatcagcacactcaaagtgaaccgtgtcttt
cagctgccctgccaaaatctcacctctatgaagcttcatgatgaccagctgtggtgctgt
acaagaagttgcattcttgtagtgtcaattcacgagtttcaactgcagatgaaaatcgag
caccacctgagggatatgtgttcctcttttcttggcttccagctctttcccgagagagat
gaagtgtgggtgtcttactccgggagtagcgacctgtacgtttggaacaccaaagacctt
tcaagtacacctcaaaagattcatcttcaggattgctctgagattacttgtatgattaga
gttaaaaatcagctgtgggttggcagcagtgggaggctgcagggcaagagcaaagggaag
atctacgtggtcagtgctgagaggaagagtgtggacaaggagctggtcggccacgctgat
gcggtgaaggcactgtgctcagcagaggacaggtacgtcctcagtggctctgggaaggaa
gaagggaagattgccatctggaaggctggctag
DBGET
integrated database retrieval system
