Cinclus cinclus (white-throated dipper): 134050855
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Entry
134050855 CDS
T10813
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03013
Nucleocytoplasmic transport
ccic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134050855 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
134050855 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccic03019
]
134050855 (THOC5)
03041 Spliceosome [BR:
ccic03041
]
134050855 (THOC5)
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
134050855 (THOC5)
Spliceosome [BR:
ccic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
134050855 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
134050855
NCBI-ProteinID:
XP_062360239
LinkDB
All DBs
Position
17
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AA seq
710 aa
AA seq
DB search
MSSESSKKRKPKVIRTDGVPVEGKRGKGDTDQETQTLLWRVSTKLEDPSGICMVPSNPPD
VRYYSEESEVDLRDPIKDYELYRETCQELQRLMAEIQELKSRGIKENASEIDERRVQSCV
HFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSK
HEEIELVSLEEFYKEAPPEISRPAITLTEPHQQTLARLDWELEQRKRLAEKYKECLTSKE
KILKEIEVKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFV
QASAYGQACDKKLVVAIEGSVEEAKALYKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQL
DDKRKEMLKRHPLSVTLDLKCKDENMLHLTFHYLMNLNVMTVKAKVTTAVEMTTAISAGD
LLSPDSLLNCLYPGDHGRKTPNPANQFQFDKVGILTLSDYVTELGHPYVWVQKLGGLHFP
KDQPQHTVAADNSLSASHMELTVKLLRSRLQSRLALHKQFASLEHGVVPVSSECQQLFPT
KIVSRLVKWTAIPYEDYAELPYTKDVIEAGLAEDTHLYYMALIERGTAKLQAAVVLNPGY
STLPPVFSLCLNWKGERNSSNDDNIRAMESEVNVYYKELWGPKPGYQLLTNQLQRLCMVL
DVYLETEPHDPSVEGPKEFPQEKMCLRLVRGPLRLKPFKFNYPQGFFSHR
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgagtccagcaagaagaggaagcccaaggtgatccgcacagacggggtccca
gtcgagggcaagcggggcaagggcgacacggaccaggagacacaaacactcctctggaga
gtgagcacaaagctggaagatccctcagggatttgcatggtgccttcaaaccctcccgat
gtcaggtactacagtgaggagagtgaggtggatctacgcgaccccatcaaggactacgag
ctctacagggagacctgccaggagctccagaggctcatggcagagatccaggagctgaag
agccggggcatcaaggaaaatgcctcggagattgacgagcggcgcgtccagagctgtgtc
cacttcatgaccctgaagaagctgaaccgcctggctcacatccggctgaagaaaggcagg
gaccagactcacgaggcaaagcagaaggttgatgcttatcacctgcagctccagaacctg
ctctacgaggtgatgcacctgcagaaagagatcaccaagtgcctggagttcaaatctaaa
cacgaggagattgagctggtgagcctggaggagttctacaaagaggccccccctgaaatc
agccgtcctgccatcaccctgacagagccccaccagcagaccctggctcgtctggactgg
gagctggagcagcgcaagaggctggcagagaagtacaaggagtgtctgactagcaaggag
aagatcctgaaggagatcgaggtgaagaaggagtatctgagcagccttcagcctcgactc
aacagcatcatgcaggcctccctgcctgtccaggagtacctgttcatgccctttgaccag
gctcacaagcagtatgagaccgcccggcacctcccgccgcctctctacgtcctctttgtc
caagccagtgcctatggacaggcctgtgataaaaagctggtggtggccattgaagggagc
gtggaggaagccaaggccctttataagccacctgaggactcgcaggatgatgagagtgat
tctgacgcagaggaggagcaaaccacgaagcggcgcaggcccaccctgggtgtgcagctg
gacgacaaacgcaaggagatgctgaagcgacaccccttgtctgtcaccctcgacctgaag
tgcaaagatgagaacatgcttcacctgaccttccactacctgatgaacctcaatgtcatg
acagtgaaagccaaggtgaccactgctgtggagatgaccacggccatcagtgctggggac
ctgctctccccagactccctcctcaactgcctctatccaggggaccacggcaggaaaacg
cccaacccggccaaccagttccagttcgataaagtgggcatcctgaccctgagtgactac
gtgacagagctgggtcacccctacgtgtgggtacagaagctgggcggcctgcatttcccc
aaggatcagcctcagcacacggtggctgctgacaattccctgagtgccagccacatggag
ctgacagtgaagctgctccggagccgcctgcagtcccgcctggccctgcacaagcagttt
gcatcccttgagcatggtgttgtgcccgtgtccagcgagtgccagcagctcttcccgacc
aaaattgtctcacgcctggtgaagtggactgccattccctatgaggattatgctgagctg
ccctacactaaagatgtgatagaggctggcttggctgaagacactcacctctactacatg
gccctgatagagaggggaacagccaagctgcaggcagctgtggtgctgaaccccggttat
tccacactgcctcctgtcttcagcctgtgcctgaactggaagggagaacggaacagcagc
aacgacgacaacattcgggctatggagagtgaggtcaatgtctactacaaggagctgtgg
gggcccaaacctggctaccagctcctcaccaaccagctgcagcgcctgtgcatggtgctg
gatgtgtacctggagacagagccccacgatcccagtgtggaggggcccaaggaattcccc
caggagaagatgtgtctgcgcctggtcaggggtcccctgcgcctgaaacccttcaagttc
aactacccccaggggttcttcagccatcgctga
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