Cinclus cinclus (white-throated dipper): 134050946
Help
Entry
134050946 CDS
T10813
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1 isoform X1
KO
K12825
splicing factor 3A subunit 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03040
Spliceosome
Brite
Spliceosome [BR:
ccic03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
134050946 (SF3A1)
Complex B
134050946 (SF3A1)
Complex C
U2 SnRNP specific factors
134050946 (SF3A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP21_like_P
Surp
ubiquitin
Ubiquitin_2
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
134050946
NCBI-ProteinID:
XP_062360370
LinkDB
All DBs
Position
17:complement(12807776..12820722)
Genome browser
AA seq
797 aa
AA seq
DB search
MFLCAIGIVFGMPNPDTPSPFVMKQSLLQPEEEPKEEAAPAKPVVGIIYPPPEVRNIVDK
TASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPK
VMQQQQSAQQQLPQKVQAQVIQETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVAR
NGRQFLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLLKLKKEAENP
KEVLDQVYYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFP
PPTTPEELGARILIQERYEKFGESEEVEMEVESDEEDEKQEKTDEPPAQLDQDTQVQDMD
EGSDDEDEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPIT
GEKIPASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDI
FGVEETAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLV
PEDDSKEKIGPSKPNEIPQPPPPSSASNPPASAQPITSVPRPPTMPPPVRAAVVSAVPVM
PRPPMTSVVRLPPGSVIATPMPPIIHTPRINVVPMPPSAPPIMSPRPPPMIVPTAFVPAP
PVAPVPSPAPMPPVHPPPPMEDEPVSKKLKSEDSLIPEEEFLRRNKGPVTVKVQVPNMQD
KTEWKLNGQVLVFTLPLSDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMT
SGSLIHLALKERGGRKK
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtgtgccatagggattgtgtttggaatgcctaatcctgacaccccttcacct
tttgtaatgaaacaatctttattgcagccagaagaggagccgaaagaggaagcagcacca
gccaagcctgtggtgggaattatttatcctcctccagaggtcagaaatattgtggacaag
actgccagctttgtagccagaaatggtccagagtttgaagcccgaattcgtcagaatgaa
ataaataaccccaagttcaacttcttgaaccccaacgacccttaccatgcctactaccgg
cacaaggtcagtgagttcaaggaaggcaaagcccaggagccctcagctgccatccccaag
gtcatgcagcagcagcagagtgctcagcagcagctcccacagaaggtgcaggcccaggtg
atccaggagacggtggttccgaaggagcccccgcccgagttcgagttcatcgcggaccct
ccgtcaatctcggccttcgacctggacgtggtgaagctcacggcgcagtttgtggcccgc
aatgggaggcagttcctcacccagctcatgcagaaggagcagaggaattaccagttcgat
ttccttcgcccccagcacagcctgttcaactatttcaccaagctggtggagcagtacaca
aagatcttgatcccaccgaagggtttactcctcaagctcaagaaggaggccgaaaatccc
aaggaagttctggatcaggtctattacagagtggagtgggccaagttccaggagcgagag
aggaagaaagaagaggaggagaaggaaaaggagcgtgttgcttatgcccagattgactgg
cacgactttgtggttgtggaaacagttgacttccagcccaacgagcaagggaatttccct
cctcccaccactccagaagagctgggagctcgaattctgatccaggagcgttatgagaag
tttggggagagtgaggaggtggagatggaggtggaatcagatgaggaagatgaaaagcaa
gagaaaacagatgagcctccagcccagctggatcaggacacacaagtgcaggatatggat
gaggggtcagatgatgaagatgaaggtcagaaggttcctcctcctccagaaaccccgatg
ccacccccactccctcccacaccagatcaggttattgtgcggaaagattacgatcccaaa
gcctcaaaaccgttaccacctgccccggctccagacgagtacctggtgtctcccatcact
ggagaaaagattcctgccagcaaaatgcaggaacacatgaggattgggctcctggatcca
cggtggctggagcagcgggatcgatccatccgggagaagcagagcgatgacgaggtctat
gccccaggtttggatattgagagcagtctgaagcagctggcagagcgtcgtactgatatc
tttggtgtagaagagactgccattggtaaaaagattggtgaagaagagatccagaaacca
gaggaaaaggtgacctgggatggccactcgggcagtatggcccgcacacagcaggctgct
caggccaatatcactctgcaagagcaaattgaagccatccacaaggccaagggactggtg
ccagaggatgacagcaaggagaagatcgggcccagcaaacccaatgagataccccagcca
ccccctccttcctcagcctccaacccccctgccagtgcccagcccatcacatctgtacct
cgtccacccaccatgcctcctcccgtccgtgctgctgtggtttctgcagttccagtcatg
cctcgtccccccatgacttctgtggtccggctgcccccaggatctgtcatagccaccccc
atgcctcccataatccacaccccacggatcaacgtggtgcccatgcccccctctgctccc
cccatcatgagcccccgcccgccccccatgatagtccccacagcctttgtccctgctcct
cccgtggctccggtcccatctccggcaccgatgcctcctgttcaccccccaccacccatg
gaggatgagccagtctccaagaaactgaagagtgaggacagcctgattccagaggaggaa
tttctgcgcaggaacaagggcccggtcacggtcaaagtccaggttcccaacatgcaggac
aagacggaatggaagctgaatggccaagtgctggtgttcaccctgcccctctcagaccag
gtgtctgttataaaggttaagatccacgaggccacagggatgccagctgggaagcagaag
ctgcagtatgagggcatcttcatcaaggattccaactcgctggcttattataacatgacg
agtggctctctgattcacctggcactcaaagagagaggaggcaggaagaaatag
DBGET
integrated database retrieval system
