Cinclus cinclus (white-throated dipper): 134051080
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Entry
134051080 CDS
T10813
Symbol
SMPD4
Name
(RefSeq) sphingomyelin phosphodiesterase 4 isoform X1
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic00600
Sphingolipid metabolism
ccic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
134051080 (SMPD4)
Enzymes [BR:
ccic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
134051080 (SMPD4)
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Gene cluster
GFIT
Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
134051080
NCBI-ProteinID:
XP_062360584
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All DBs
Position
17:11694647..11710808
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AA seq
797 aa
AA seq
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MAGPHLQQPSFLLATLKADCVNKPFAQRCHDLETVIEELPAKELHGIFPWLVESIFGSLD
GIIVGWNLRCLQGRTNPNEYSVALDFLDPSGPMMKLVYKLQAEEYRYDFPVSYLPGPVKA
SIQEQVLPECSLYHNKVQFPSSGGLGLNLALNPFEYYMFYFAISLITQKNSPATHHVSPS
NSAYFILVDTYLKCFLPTEGSVLPPPSSNPGGAIPSPTPRSPAVPFSSYGMHHTSLLKRH
IAHQPSVNADPASQEIWRSETLLQIFVEMWLHHYSLEMYQKMQSPHVKESFKPTEEHVLV
VRLLVKHLHAFSNSLKPEPLSPSAHSHTASPLEEFKRVVIPRFVQEKLYIFLQHCFGHWP
LDASFRAVLEMWLSYLQPWRYAPEKPPQSTEPLPRSVSDKWAAFIQENLLMYTKLFVGFL
NRALRTDLVSPKNALMVFRVAKVFAQPNLAEMILKGEQLFLEPELVISHRQHRLFMSPTL
GGSFLSSRSPAVTDASFKVKSHVYSLEGQDFQYKQMFGAEVRNLVLKLAQLICQAQQTAK
SISDHSAETMASQSFFSWFRFTPSEVNGSYTGNDLDEIGQDSIKKTDEYLEKALEYLCQI
FKLSEAQLTQMMMKCGTAQDENGKKQLPDCIASENGLILTPLGRYQIINGLRRFELQYQG
DTELQPIRSYENAALVRLLFRLSSQLNHRFADQMEMLCSRDDFVGRLCRYHLTNPQLAQK
IRHSPVMRDRTSQHWGPRISLRFLASYRTLISLLMLYFLASWFYVGPVGCTFIILTGYFL
YAVIMTFFFEGWKPHEH
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggctgggccgcacctgcagcagcccagcttcctgctggccacgctgaaggcggactgt
gtcaacaaaccgtttgcacagaggtgccacgatctggagacggtcatcgaggagctgcct
gccaaggaactacatggcatcttcccatggctggtggaaagcatttttggcagcctggat
ggcatcatcgtgggctggaatcttcgctgcttgcaaggaaggacaaatcctaatgaatat
tctgtggctttggatttcctggatcccagtggcccgatgatgaagctggtttacaaactc
caagcagaagagtacagatatgatttcccagtctcatatcttccaggccctgtgaaggct
tcaatacaagagcaagttctaccagaatgctctttataccacaacaaagtccagtttcct
tcatctggtggtttaggtttgaatttagctcttaatccatttgaatattacatgttttac
tttgcaattagtttgattacacagaaaaactcacctgccacccatcatgtcagcccttcc
aacagtgcttatttcatcctggtggacacgtacctaaagtgtttcctacccacagaagga
agtgtccttcccccaccttcttcaaatcctgggggagccatcccttcccctactcccagg
tccccagcagtgcctttctcctcctatggcatgcaccacaccagcctgctgaaacggcac
attgcccaccagccctctgtgaacgctgacccagcctcccaggagatctggagatcagaa
acactgcttcagatctttgttgaaatgtggcttcatcattattcactggaaatgtatcag
aaaatgcagtcccctcacgtcaaggagtcattcaagcccactgaagagcatgtgctagtg
gtaagactgcttgtgaaacatctgcatgctttcagcaacagcctgaaaccagagcctctc
tccccttcagcccactcccacacagccagcccactggaagagtttaaaagggttgtgata
cctcggtttgtccaggagaagctttatatctttctgcaacactgttttggccactggcct
ctggatgcctctttcagagcagttcttgagatgtggttgagttacttgcagccctggagg
tatgcacctgaaaagccaccacaaagcacagagcctttgcctcgcagcgtctcggacaaa
tgggctgccttcattcaagaaaacctgctcatgtataccaagctgtttgtgggatttctg
aacagagctcttcgaacagacttggtcagtccaaaaaatgccctcatggtattccgagta
gccaaggtctttgctcagcccaatctagctgaaatgatcctgaaaggagaacagttattc
ctggagccagaacttgttatttcccaccgtcaacaccgactttttatgagccccactctt
ggtgggagttttttgtcatcacggtctccagctgttacagatgcctcatttaaggtgaaa
agtcatgtttacagcctggaaggacaggacttccagtataaacagatgtttggtgcagaa
gtcaggaatttggtgttaaaactggcccagttaatttgtcaggcacagcagacagctaag
tccatatcagaccattctgcagagacaatggccagccagtccttcttctcctggtttaga
ttcacgccatctgaggtgaatggttcctacacaggcaatgaccttgatgaaattgggcag
gacagcatcaaaaaaacagatgaatatttagagaaggcactggaatatttgtgccagatc
tttaagctgagtgaagcccagctgactcagatgatgatgaagtgtgggacagctcaagat
gagaatggaaaaaaacagcttccagactgcattgcaagtgagaatggcctcattcttaca
cccctgggaaggtaccagatcataaatggcttacgtaggtttgagctgcagtatcagggg
gacactgagctccagcccatccggagctatgaaaatgctgctctggttcgtctcctgttc
cgcctgtcctcgcagctcaaccacaggtttgctgatcagatggaaatgctttgctccagg
gatgattttgttggcagactctgtcgctatcatctgaccaacccccagctcgcacagaaa
atcaggcacagccctgtgatgagggacagaacgagccagcactggggacccaggatcagt
ctgaggtttctggccagctacaggactctgatttctttgctgatgctctacttccttgca
tcctggttttatgttgggccagttggctgcacattcattatcctaactgggtattttctt
tatgctgtaataatgacttttttctttgaaggatggaaaccacacgaacactag
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