Entry |
|
Symbol |
TCTN1
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Name |
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KO |
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Organism |
ccic Cinclus cinclus (white-throated dipper)
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Brite |
KEGG Orthology (KO) [BR:ccic00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:ccic03037]
134051112 (TCTN1)
Cilium and associated proteins [BR:ccic03037]
Primary cilia and associated proteins
MKS complex
134051112 (TCTN1)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
17:3403593..3417787
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AA seq |
562 aa
MAAAAPGLGFYFVLILLLLPPLRAEEPAAEPADTRDAARVRSAPAPITDVARLCVCDLLV
AQCDVNCCCDPDCSAEDFSLFTTCSVPVVIGDSQLCSQKAAVYSLDVEANPPERIFKLID
QVNPSIFCIHAANYEQALYLKSPEIPTPENFDQLLEKFGGASFRAEPDSWNLDTDAQNPP
EANETSRYEYGVPVQTKDAFLRLPSPVVSSWCSDANPAGFLVNQATKCIRSVSVENCDSI
QALSMLFYINSSILAVPKSSQMVNITVQSIAVQSLNGMRTLLSSSDVLRLPVVLDELCIN
AVLGVNYHITYTDTGEIIEAAAAFVLGAISKETLSIEQSFKISFAQENTQPVPLSGNPGY
VVGLPVRAGFHPQGSGIIQSSNKHSQLTILQSTSTQDCLAAQGARTPVLFGYNMISGCKL
RITAAMKCQPLAQTLLDVLKGQSFPEYVASFGNSQAQDVLDWVPITQLHISQQSPCQIPV
SLGIEVKWTKYGSLVNPQARIVNVTATITTTTLKQLPSGREKIIPITSSVVFTDISSPAE
PSYKAWPTINIKLPFDFFYPFV |
NT seq |
1689 nt +upstreamnt +downstreamnt
atggcggcggcggcgccgggcctcgggttttacttcgttctcatcctccttctccttccg
ccgctccgggcagaagagccggccgcggagcccgcagacactcgtgatgccgcacgggtt
cgcagcgcgccggccccgattacggacgttgccaggctgtgtgtctgcgacctgctggtg
gcacagtgtgatgtcaactgctgctgtgaccccgactgcagcgccgaggacttcagcctc
ttcaccacctgctcggtccctgtggtcataggtgacagccagctgtgtagtcagaaagct
gctgtgtattctcttgatgttgaagcaaatccaccagaaaggatatttaaattaattgac
caagtcaatcccagtattttctgcattcatgctgcaaactatgaacaagctctgtatctc
aaatcccctgaaatcccaactccagaaaattttgatcagttgcttgaaaaatttggaggt
gcttctttcagggctgagcctgacagctggaatttggatacagatgctcaaaatccccct
gaagcaaatgaaacttccagatatgagtatggggttcctgtgcagacaaaggatgcattt
ctaaggctgccaagtcctgttgtctcctcttggtgctctgatgcaaaccctgcagggttt
ttagtaaaccaagccacaaaatgcattaggtcagtaagtgtggaaaactgtgacagcatt
caagcacttagcatgttgttttatatcaactccagcattttggcagtgcccaaatcaagt
cagatggtgaatattactgtccagtccatagctgtccagtctctgaatggaatgaggact
ttactgagcagtagtgatgtcctgaggctgcctgtggttttggatgaactgtgcatcaat
gcagttcttggggtgaattatcacattacctacacagacacaggagaaataatagaagca
gctgctgcttttgtcttgggggcaattagcaaagaaacactttcaatagagcagagcttc
aaaatcagcttcgctcaggaaaatacacagccagttcctctcagtggcaatcctggttat
gttgttgggctgcctgtcagagcaggattccatcctcaaggatctggcatcattcagagt
agtaacaaacacagccagctcaccattctgcagagcacatccacccaggactgcctggca
gcacagggagccagaaccccagtattatttggttataacatgatatcaggctgtaagtta
cgaattacagcagctatgaaatgccagcctttggctcagaccctccttgatgtgctgaag
ggccaaagcttccctgagtatgtggcctcatttgggaattctcaagctcaggatgtgctc
gactgggtgccaataactcagctccacatctcacaacagagcccatgccaaataccagtg
tcattgggaatagaagtgaagtggactaaatatggatccctggtcaatccacaagccaga
atagtgaacgttacagccacaatcactaccaccacactgaagcagcttccctcaggaagg
gagaagattattcctataacaagttctgtggttttcactgacatttcttcacctgcagag
ccgagctacaaagcttggcccaccattaacatcaagttaccctttgactttttctatccc
tttgtctaa |