Cinclus cinclus (white-throated dipper): 134051123
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Entry
134051123 CDS
T10813
Symbol
NCOR2
Name
(RefSeq) nuclear receptor corepressor 2
KO
K06065
nuclear receptor co-repressor 2
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
134051123 (NCOR2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccic03036
]
134051123 (NCOR2)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
134051123 (NCOR2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
DnaT
Motif
Other DBs
NCBI-GeneID:
134051123
NCBI-ProteinID:
XP_062360658
LinkDB
All DBs
Position
17:1919283..2076008
Genome browser
AA seq
2493 aa
AA seq
DB search
MSGSTQPVTQSWRAAEPRYPPHAMSYPVQIARPHADVALLEYQHHSRDFASHLPPGSIMQ
PQRRRPSLLSEFQPGNERSQELHLRAEGHSYLSDLTKPSDLEFIETKRPRLELLQDPLMR
HSPLLSQSQQGGTEDLSKDRGLPGKLEPVSPVSPAHPDTELDLLPARLSKEELIQNMDRV
DREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPISPPPIESKHRSLVQIIYDENRKKAE
AAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLILYFKRRNHARKQWEQKFC
QRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRELQERMQRLEEKRRV
GQRGSGGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDADQQRIKFINMN
GLMDDPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLDRKTVADCVLYYYLT
KKNENYKNLVRRNYRRRGKSQQQQQMPRSSQEEKDEKEKEKEKEGEKEEDKQEAENDKEE
LTKDKNDDTSGEDNDEKETVTSKGRKTANSQGRRKGRITRSMANEANNEEAATPQQSAEL
ASLEMNESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDE
ILQQHKLKMEKERNAKRKKKKGAAVQNEEAAFPPAAEDEEMEVSGTSGNEEEMAEEAEAA
VNNSSDTESIPSPRPEAKEGGENGAKAPPGPGGDAGTEPAVKWEEAPAPPDAPPAPPTNP
APACSPPPETAPEPPSTEEKVPEDLVVDVVKTEEPEEKVSEEPCKSEVKKEESEESQEKD
KGNDQKVESSISSAGTAGTEGTPKAEKKESHKGSKGPGVNPDSDSSATCSADEMDEQDAV
DKSRLLSPRPSLLNTASDTRLNSSPQKPLDLKQLKQRAAAIPPIISEGFSEGVLQSGSAK
PQVPPHALALYQQQITKAHESAREDVPPSKLSQSQQQQAEKEQQQPSSSPRGKSRSPAVG
DKEEKSVHFSAIAEAQKLSAESMAASCWPPVLSYPRDVIKTSPQAEPHLFQYNPPGHPIP
LNLHESSRSGLQRLASISNPPPLISSAKHPSVLERSVGSISQGMPIQLHTPYSPEHAKVP
VGSITMGLPLTMDPKKLVPFPGVKQEQLSPRSQASQPESLVLQPSQEGSILRGTSLSSAS
GGSITKGTPTSRPPPESPITYRGSITHGTPAEVLYKGTITRIIGEDSPSRAEKAREDAVP
KGHVIYEGKKGHVLSYEGGVAASQCPKEDSRSSGASHETTGTKRTYDMMEGRISRGLSAR
DTLSTSIEGLMGRAIPPDRHSPHNLKEQHHMRGSITQGIPRSYVEAHEDYLRREAKQLKR
ENTPPRDLSDAYKVRSHDLTPLKMKSAHEDLVATVKEAGRSIHEIPREELRRTPDISLTR
PLKEGSITQGTPLKYDSSSSSSSTKKHDVRSIIGSPSRTFHSVHSLDVIQDPRNLERAYE
ESLKNRPSPVTNSGGSIARGAPVIVPEPGKPHQSALGYEDHQAGHGTAFSSHLHRGSPVS
TRESTPRQHEGSITAGKPVSQDRKITPTSRELTNSKSPHAPVPDHHHPISPYEHLLRGVS
GVDLYRGHIPLPFDPAAIPRGIQLEAAAAYYLPRHLAPSPTYPHLYPPYLIRGYPDTAAM
ENRQTIINDYITSQQMHHNAAATAMAQRADMLRGLSPREPSLALNYAAGIIDLSQVPHLP
VLVPPTPGTSATTMDRITYIPGPPQTFGSRHSSSPLSPGGPTHMTKQSGSSVSERERERE
REREREREKSILASTTVEHAPIWRPGTEQSSSRSSSHSHSHQHSPVSPRTHETIQQRPSV
LHNTSMKIISSETPTPSVLRSSSTTTTSPIRSAAFPSASTLRSSLSAADGYAAPLDPTIL
QKEASRVREAKSERAQTDNNVYTSKLPSGANLEQSPSPIKAMESRPLPTSSGSSHHYGRG
QGKSQQHHHPLDQQHAASGSEQHSREKSQSKRFAMQEQELRALGFHGGYSPERMEAVSPV
SSPSLSHEKGAKLLQDTEKGHGEHDLRQKQQGSLKASAPEATHLQHLRQPDGPQCQPLQS
SQSIKGMNQRVVTLAQHISEVITQDYTRHHPQQLNSHIQAPVYSFPGAACPVLDLRRTPS
EAFLQQQEHTAASRISPHNELGKRSPEQGKAAAGAPESCIEPVSPPDGVGETEHAKSAPY
PVLFREGEPMDQRMGSKSPGNNTQRPAFFSKLTESNSAMVKSKKQEIIKKLSTTNKNETE
YNVGQPGTEIFNMPAITGAGLISCRSQSVQENSSTNMGLEAIIRKALMGKYDEQWEERSP
LSANAFNSLNASASLPAAMPITPADGRNEDVRSLPGGGGKPKIAARPNSRKAKSPAPGLS
SGERPPSVSSVHSEGDCNRRTPLTNRVWEDRPSSAGSTPFPYNPLTMRLPSGVVTAAPSA
PLPQGTPGSQHHAWDEEPKPLLCSQYETLSDSE
NT seq
7482 nt
NT seq
+upstream
nt +downstream
nt
atgtctggctccacgcagcccgtgacgcagagctggcgcgcggccgagccgcgctacccg
ccgcacgccatgtcctaccccgtgcagattgcccgaccgcatgcggacgttgcgctcttg
gagtaccagcatcattccagggattttgcttcccacctcccgccagggtcgatcatgcag
ccgcagcggcggaggccgtccctgctctccgagttccagccgggcaatgaaagatctcag
gagctgcacctgagagccgagggccattcctatctctctgacctgaccaagccatcggac
ttggagttcattgaaaccaagaggccacgcctggagctgctgcaggaccccctgatgcgg
cactcgcccctcctgagccagagccagcagggaggcacagaggatctctcaaaggatcgt
ggcctgcctggcaaactggagcccgtgtctcctgtgagccctgctcaccctgacaccgag
ctggacctgctgccagcccggctctccaaggaggagctcatccagaacatggaccgcgtg
gaccgcgagatcaccatggtggagcagcagatctccaagctgaagaagaaacagcaacag
ttggaggaagaagcagccaaaccaccagagcctgaaaaacccatctctccccctcctatc
gagtccaaacatcgcagcttggtgcagatcatctacgacgagaacaggaagaaggcagag
gctgcccaccggatcctggaagggctgggtccccaggtggagctgccgttatacaaccag
ccttcggacaccaggcagtaccatgaaaacattaaaataaaccaggcaatgcggaaaaag
ttaattttatactttaagaggagaaatcatgcacgcaagcagtgggaacagaagttttgc
cagcgctatgaccagctgatggaggcctgggaaaaaaaagtggagcgcattgaaaataac
ccacggcgccgtgccaaggagagcaaagtgcgggaatactatgagaagcaattcccggag
atccggaagcaacgcgagctgcaagagcgcatgcagaggttagaggagaagcgcagggta
ggacagaggggcagtggtgggctctccatgtcagccgcacgcagcgagcacgaggtgtcc
gaaatcatcgacgggctctcggaacaagagaacctggagaagcagatgcgccagctcgcc
gtcatcccccccatgctctacgatgctgaccagcagcgcattaaattcatcaacatgaat
ggcctcatggatgaccccatgaaggtctacaaggaccggcaggtgatgaacatgtggagt
gaacaggagaaggagactttccgggaaaagttcatgcagcatcccaagaacttcggcctg
atcgcatcctttctggacaggaagactgtggctgactgcgtcctctattactacctgacc
aagaagaatgagaattacaagaacctcgtgagaaggaattaccggcggcgcgggaagagc
cagcaacagcagcaaatgccccggagcagccaagaagagaaagatgaaaaagagaaagaa
aaagagaaggagggagagaaggaggaagacaagcaggaagcagaaaatgacaaagaagaa
ctgacaaaggacaagaacgacgacacatctggagaagacaacgatgagaaagaaactgtc
acttccaaaggtcgcaaaaccgccaacagccagggccggcgcaagggtcgcatcacccgc
tccatggccaacgaggccaacaacgaggaggcagccacaccacagcagagcgcagagctg
gcttccctggaaatgaatgaaagctctcgctggaccgaagaggagatggagaccgctaaa
aagggtctccttgagcatgggcggaattggtctgccattgccaggatggtgggctccaag
acagtgtcacagtgcaaaaacttctacttcaactacaagaagaggcagaacttggacgag
attctacagcagcacaaactgaaaatggagaaagaaaggaacgccaagaggaagaagaaa
aaaggcgccgctgttcagaacgaagaagccgccttccctcccgcagccgaggacgaggag
atggaggtgtcggggacgagcggcaacgaggaggagatggcggaggaggcggaagctgca
gtaaataacagctccgacaccgagagcattccctcgccaaggcccgaagccaaagaagga
ggcgaaaacggggccaaggcaccacccgggccgggaggtgacgccggcacagaaccggca
gtcaagtgggaagaggctccagcaccccccgacgctccccctgctcctccaaccaaccct
gctcctgcttgcagccccccgccggagacagctccggagccacccagcaccgaggagaag
gtgccggaggacctggtggtggacgtggtgaaaacggaggagccggaggagaaggtgagc
gaggagccctgcaagagcgaggtgaagaaggaggagagcgaagagagccaggagaaggac
aaggggaatgaccagaaggtggaaagcagcatcagcagcgcggggacggcagggacggag
gggacgcccaaggccgagaagaaggagagccataagggcagtaaaggccccggggtgaac
cccgacagcgactccagcgcgacctgcagcgcagacgagatggatgagcaggatgctgtg
gacaagagcaggttgctgtctccccggcccagcctgctcaacactgccagtgacaccagg
ctcaactcctcgccgcagaagccactggacctgaaacagctgaagcagagagctgctgcc
atccctcccattatttcggaaggtttctcagagggggtattgcagagtggaagcgcgaag
cctcaggtgcctccccatgccttggctctctaccagcagcagatcacaaaagcccacgag
tctgcccgagaggacgtgcccccgagcaagctctcccagtcccagcagcagcaggctgag
aaggagcagcagcagcccagcagcagtcccagggggaagagccggagccccgctgttggt
gacaaggaagaaaagtccgtgcatttctcagccattgcagaggctcagaagctgagtgcc
gagtcgatggctgcctcgtgctggccccctgttctgtcctatccccgggatgtgatcaaa
acttctccccaggcagagccccacttgttccagtataacccaccaggacaccccatccca
ctcaacctgcatgagagctctcgctcagggctgcagagattagccagcatctccaaccct
cctcccctcatctcctccgccaagcacccctcagtgctggagagatccgtcggatccatt
tcccagggaatgcccatccagctccacacaccctacagccccgagcacgccaaggtccct
gttggttccatcaccatgggcctgccactaaccatggatcccaagaaactggtgcctttt
cctggagtaaagcaggaacaactttctcctagaagccaggccagccagccagaaagtctg
gttctgcagccatcccaggagggctccatcctgcggggtacttccctcagctctgcctcg
ggaggaagcatcaccaaaggaacacccacatccagacccccaccggagtcgcccatcacc
taccgagggtccatcacacatggcaccccggcagaagtgctgtacaaaggaaccattacc
aggataatcggagaagacagccccagcagagcagagaaggcgagggaggatgccgtgccc
aaaggacatgtcatctacgaagggaagaaaggccacgtgctgtcctacgagggtggagtt
gctgcttctcagtgtcccaaagaagacagcaggagctcgggagcttcccatgagaccaca
ggaactaagcggacctatgatatgatggaggggaggatcagcaggggcttatcagcccgt
gataccttatctaccagcattgaaggcctcatgggtcgcgcgatccctccagaccgacac
agtccccataacctgaaggagcagcatcacatgcgaggctcaattacacaaggaatacct
cggtcctatgtggaggcccatgaggactacctcagaagagaagccaaacagctcaagagg
gaaaacactccacccagggacttatctgatgcctacaaggtcagatctcacgatctgact
cctctgaaaatgaaatcagcccatgaagacctggtagccacagtgaaagaagcaggaagg
tcaatccatgagattccccgggaggagctgaggcggacaccagacatctctctgaccaga
cctctgaaggaaggatccatcacacagggtaccccattgaagtatgacagcagctcttcc
tcctcgagtaccaaaaagcacgatgtgcgctccatcatcggcagtcccagcaggactttt
cactctgtgcattctctggatgtcatccaagacccgaggaatctggaaagagcttacgaa
gagagcctgaaaaacaggccaagccctgtgacaaactcgggtggctccatcgccagaggg
gctcctgtgattgtacccgagccgggcaagccccaccaaagtgctctgggctatgaggac
caccaggcagggcacggcactgcgttcagcagtcacttgcacagagggtctccagtctcc
acacgggagtccacaccacggcagcacgaagggagcatcactgctgggaagccggtgtcc
caggacagaaagatcacccccacatccagagagctcaccaactccaagtctccacacgcc
cccgtgcccgaccaccaccaccccatctccccgtacgagcacctgctccgcggcgtcagc
ggcgtcgatctgtaccgaggacacatccccctgcctttcgaccccgccgccatcccgagg
ggaatccaactggaagcagctgctgcttactacctgccaaggcatcttgctccgagcccc
acgtacccacacctgtaccctccgtacctcatccggggctacccggacacggccgccatg
gagaaccgccagaccatcatcaacgactacatcacgtcgcagcagatgcaccacaacgcc
gcagccacggccatggcgcagcgggcggacatgctgcgtgggctgtcaccccgggagccc
tccctcgccctcaactatgcagcaggcatcatcgacctgtcccaagtgccgcacctgcct
gtcctcgtgccccctacccctggcacctctgccaccaccatggaccgcatcacctacatc
cctggacccccccagacctttggcagccggcacagcagctccccgctctccccaggaggg
cccacgcacatgaccaaacagtcaggatcatcggtgtccgaacgggagcgggaacgggaa
cgggaacgagagagggagcgtgaaaaatccatcctagcttccaccacagtggagcatgcg
cccatctggagaccaggtacagagcagtccagcagtcgttcatcctcccactctcacagc
caccagcactctcctgtctcaccccgcacccacgagaccatccagcagcgccccagcgtg
ctccacaacacgagcatgaagatcatctcctcggagacccccaccccttccgtcctacga
tcctcctccaccaccaccacgtcaccgatccgctctgccgccttcccctctgcctccacc
ctgcgctcctccctcagcgctgccgatggctacgcagcccctctggacccaaccattctg
cagaaagaggcctccagggtgcgggaagccaagtcagaacgagcccagactgacaacaac
gtctacacctcaaagctgcccagcggggccaacctcgagcagtcgccttcgcccattaaa
gccatggagtcgagacctttgcccacctcctctggttcctctcatcactatggcagagga
caggggaaaagccagcagcaccaccaccctctggaccagcagcacgcagcctcaggctcc
gagcagcacagtagagaaaagagtcaaagtaaacgctttgccatgcaggagcaggagctc
cgagcactcggctttcatggaggctacagccctgaacggatggaagcagtgagtcccgtg
agctcacccagcctttcccatgagaaaggggccaagctgctgcaggacacagagaagggc
catggggagcatgacctgaggcagaagcagcaaggctcgctgaaggcctcagctcctgaa
gccacccacctgcagcacctgaggcagcccgacggcccccaatgccagcccctgcagtcc
agccagagcatcaagggcatgaaccagcgggtggtcacgctggcccagcacatcagtgag
gtcatcacgcaggactacacccgccatcaccctcagcagctcaactcccacatccaggca
ccggtgtactcgttccccggggcggcgtgcccggtgctggacctgcgccgcacgcccagc
gaggccttcctgcagcagcaggagcacacggcagcctcacgcatctccccgcacaatgaa
ttgggcaaaaggtccccggagcagggcaaggcggcggcgggagccccggagagctgtatc
gagcccgtgtctccaccagacggcgtgggagaaacagagcacgccaagagcgccccgtac
cccgtcctgttccgcgagggagagcccatggaccagaggatggggtccaagtccccagga
aacaacactcaacgtccagctttcttcagcaagctgaccgaaagcaactctgccatggtg
aagtccaagaagcaggagatcatcaagaagctcagcacgaccaacaaaaacgagacggag
tacaatgtggggcagcctgggacagagattttcaacatgccagcgattactggagcaggg
ctaatcagttgtaggagccagtcggtccaagagaattccagtaccaacatggggttggag
gcaataattaggaaagccctaatgggtaaatatgacgagcagtgggaagagcgctcacct
ctcagtgccaatgcttttaactctctgaatgccagtgcaagcctgcccgctgctatgccc
ataactcctgctgatggacgaaacgaggacgtgcgctccttgccaggaggaggggggaag
ccaaagatcgctgccagacccaacagccgcaaggccaagtccccagcgccgggtctgtcc
tcgggagagcggccgccctcggtgtcctcggtgcactcggagggcgactgcaaccgcagg
acccccctcaccaaccgcgtctgggaggacaggccgtcgtccgcaggttcgacgccgttc
ccctacaacccgctgaccatgcggctccccagcggggtggtgacggcggcgcccagcgcc
ccgctgccgcagggcacccctggcagccagcaccacgcctgggatgaggagcccaagccc
ctgctctgctcccagtacgaaaccctttcggacagtgaatga
DBGET
integrated database retrieval system
