Cinclus cinclus (white-throated dipper): 134051143
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Entry
134051143 CDS
T10813
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03030
DNA replication
ccic03410
Base excision repair
ccic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
134051143 (POLE)
03410 Base excision repair
134051143 (POLE)
03420 Nucleotide excision repair
134051143 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccic03032
]
134051143 (POLE)
03400 DNA repair and recombination proteins [BR:
ccic03400
]
134051143 (POLE)
Enzymes [BR:
ccic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
134051143 (POLE)
DNA replication proteins [BR:
ccic03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
134051143 (POLE)
DNA repair and recombination proteins [BR:
ccic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
134051143 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
134051143
NCBI-ProteinID:
XP_062360688
LinkDB
All DBs
Position
17:13852756..13885452
Genome browser
AA seq
2296 aa
AA seq
DB search
MGQRDGAEPEAARRGRRLGGYREPADSAGPGRDDAPALSALKRLERAQRTDRLDALFGFE
RPAEPGERTGWLINMHPTEVLDEDRRSVSAVDYYFIQEDGSRFKVALPYQPYFYIATQKG
CEREVSSFLSKKFQGKIAKLETVPKEDLDLPNHLVGLKRNYIKLSFNTVEDLVKVRKDIS
PAVRKNREQDQASDVYTTMLSSTLHGGSLNTDEEGASKKFVSQMDNIVDMREYDVPYHVR
LSIDLKIHVAHWYNVRYRGNTYPPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDADTD
QIMMISYMIDGQGYLITNREIVSENIEDFEFTPKPEYEGPFCVFNELDEAHLIQRWFEHI
QETKPTIIVTYNGDFFDWPFVEARAAVHGINMYQEIGFQKDSQGEYKASQCIHMDCLRWV
KRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMAMEEPQTLATYSVSDAVATYYMYM
KYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTQDG
HVLDSETYVGGHVEALESGVFRSDIPCRFRMNPAAFDLLVQHVEKTLQHAIEEEEGLPLD
QVTNFQEVCDEIKAKLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATC
AACDFNKPGANCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKFPPLFPDGPPRAFHELS
REEQAKYEKKRLADYCRKAYKKIHVTKVEERVTTVCQRENSFYVDTVRAFRDRRYEFKGL
HKVWKKKLSAAVETGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEM
AGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNTKKPKVTIS
YPGAMLNILVKEGFTNEQYQELQDPASLTYITRSENSIFFEVDGPYLAMILPASKEEGKK
LKKRYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGSTLEEVYASVAKVAD
YWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKD
AGLSCRFIISKKPEGSPVTERAIPLAIFQAEPSVRKHYLRKWLKSPSLQDFNIRTILDWD
YYIERLGSTIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFISEG
KKQVLACQPVEGTPSSQVGDIEDFRTVKIRQPLIPIANKRKRIPAAEESQQLSQDLELSQ
SWREILGPPPPFGTTKEEHLVWLRFHQKKWGLQARQRQEQRKRRRLEDDGVVTGGGAVRD
ALSKGLGSYLRRRARSILDLPWQVVQIAETGQPGLFRLWAVIGSDLHCIKLSIPRVFYVN
QRIPKPEEGTACRKVNRILPRSNLVYNLYEYSVPEDMYQEHINEINADLSAPDIEGVYET
QVPLLFRALIHLGCVCMVSRQLVQHLAGREAETFNIEHLEMRSLAQFTYLEPGSIRHIYL
YHSSQGSRALLGLFIPSQRKAAIFVLDKVRSNQMPNLTTLFSVERAALLEKVGKELLPPD
KHTFEVRAETDPNAIYRGVQRMLLGYKDERRGPTLVAVQSNWDLKRLASGIPTIEEFPLV
PIRLVDDISYSVLDWQRHAARRMIRHYLNLDTCLSQAFEMSRYYHIPIGNLPDDISTFGS
DLFFSRHLCRHNHLLWLSPTARPDLGGKEADDNRLVMEFDERASVEINNPGCYSTVCLEL
DIQSLAVNTVLQSHHVNDMEGGSSMSISFDVIQQASLEDMVTGNQAVNIPASYDETALCS
NAFRILKSMVVSWVKEITQYHNVYADNQVIHFYRWLRSPSSLLYDPALHRMLHNMMKKLF
LQLVAEFKRLGSSVVYANFNRIILCTKKRRIEDAISYMEYIINSIHSKEIFHSLTISFSR
CWEFLLWMDPANYGGIKGRVDSRIHYGEKDTSKKQALEEEESEEEEEEVAREEEEEEGEP
DVEELLENSWNIAQFLPQAGSCQSYFLMIVSAYIVAVYHSMKEELQRNISGSTPIKRRST
SQVSQEALGELRAMPGMITFSQDYVANELTQSFFTITQKIQKKMAGSQNATEPSDMFPVL
PGSYLPLNNPALEFIKYVCKVLSLDANITNQVNKLRRDLLRLIEVGEFSEAAQFQDPCRS
YVLPEVICRNCNFCRDLDLCKDPSLSQDRLVLPSWHCPNCHVQYDIVAIEMALVEALQKK
LMAFMLQDLVCKKCHAVKETHMPVYCSCAGDFALTISSQAFMDHVSVFQNIARHYGMAYL
LETIEWLLHTNLQLQQ
NT seq
6891 nt
NT seq
+upstream
nt +downstream
nt
atggggcagcgggacggcgccgagcccgaggcagcgcggcgtgggcggcggctaggcggg
taccgggagccggcggacagcgccgggcccggccgtgacgatgcccccgcgctgtctgca
ctcaagcgcctggagcgggcacagcgcacggaccggctagacgcgctgttcggcttcgag
cggcccgcggagcccggtgagcggacgggctggctcatcaacatgcacccgacggaggtg
ctggatgaggaccggcggtcagtgagtgcagtggactactacttcatccaggaggatggg
agccgcttcaaggtggccctaccctaccagccctacttctacattgccacccagaagggc
tgtgagcgggaagtgtcctcattcctctccaagaagttccaagggaagattgcaaaactg
gaaactgtccccaaagaggacttggacctgccaaaccacttggtgggcctgaagaggaac
tacatcaagctgtccttcaacacagtggaggacttggtgaaggtgcggaaggatatctct
cctgctgtgaggaaaaacagggagcaggaccaggcgagtgatgtctacacgaccatgctg
tcgagcactctgcatgggggcagtctaaacacagatgaggaaggagcctccaaaaaattt
gtcagccagatggacaacattgtggatatgcgggagtatgatgtgccctaccacgttcgc
ctttccatcgacctgaagatccatgtggctcactggtacaacgtgcgataccggggcaac
acctacccccccgaaatcacccgccgagatgaccttgtggaacggccggatcctgttgtt
cttgcctttgatattgaaacaaccaagctccctttgaagtttcctgatgcagacacagac
cagatcatgatgatctcctacatgattgatgggcagggctacctgatcacaaacagggag
attgtctcagagaacattgaagactttgagtttactcccaagccggagtatgagggtcca
ttttgtgtctttaatgaacttgatgaggctcatttaatccagagatggtttgaacacatc
caggagaccaaacccaccatcattgtcacatacaacggagacttctttgactggcccttt
gtggaagcaagagcagcagttcatggaattaatatgtatcaggaaattgggtttcagaag
gatagccagggagagtacaaagcatcccagtgcatccacatggactgtctgaggtgggtg
aagagagacagttacctcccagtgggaagtcacaacctgaaagcagcagctaaagcaaaa
ctgggttatgatccagtggagttggaccctgaggagatgtgccgcatggccatggaggag
cctcagaccttggccacctactcagtgtccgatgccgttgctacttactacatgtatatg
aagtacgtgcatcccttcatttttgccttgtgtaccatcattcccatggagcctgatgag
gtgttaagaaaaggatctgggacactgtgcgaggcactgctgatggttcaggcctatcat
gccaacatcatcttccccaacaagcaggagcaggaattcaacaaacttacccaagatgga
catgtgctagactctgagacgtacgtgggaggccacgtggaagcactggaatctggggtg
ttccgcagtgacattccctgccgcttcagaatgaatcctgctgccttcgacctcctggtg
cagcacgtagagaagaccttgcagcatgctatcgaggaagaggaaggtctgcccttggat
caggtcaccaacttccaggaggtttgtgatgaaatcaaggccaaactgaattccctgaag
gatgttcccaacagaattgagtgtcctcttatctatcatctggatgtgggggccatgtac
cccaacatcattctgaccaacaggttgcagccctcagccatggtcgatgaggccacatgt
gctgcctgtgacttcaacaagccgggtgccaactgtcagcgccggatgacctggcagtgg
agaggagaattcatgcctgccagccgcagtgagtaccaccgcatccagcagcagctggag
tcagagaagttccctcccttgttccctgatggaccaccccgtgctttccacgagctctcc
cgggaagagcaagccaagtatgagaaaaagcgcctggcagattactgccgcaaggcgtac
aagaagatccatgtcaccaaggtggaggagcgagttaccaccgtctgccaacgagaaaac
tctttctacgtggacacagtgcgagcattccgggaccgccgatatgagttcaaggggctg
cacaaggtgtggaagaagaagctgtctgcagcagtggagacaggagatgcctctgaagtg
aaacgctgcaagaacatggagattctctatgactccctgcagctggcccacaagtgcatc
ctcaactccttctatggatatgtcatgcggaaaggagctcgctggtactccatggaaatg
gctggcattgtctgcttcacaggggcaaatatcatcacccaagccagagagctgattgag
cagattgggagacctctagaactggataccgatgggatttggtgtgtccttcccaatagt
ttcccagagaacttcgtcatcaagtcaaccaataccaagaagccaaaagtgacaatctct
tacccaggtgccatgctgaacatcctggtgaaggagggcttcacaaatgagcagtaccag
gagctgcaggatccagcctcactcacgtacatcacgcgctcagagaacagcatctttttt
gaagtggatggtccgtaccttgccatgatccttccagcctccaaagaggagggcaagaag
ctgaagaaaaggtacgccgtgttcaatgaggatgggtccctggccgagctgaaggggttt
gaggtgaaacgccggggagaactgcagctggtgaagatattccagtcatctgtgttcgaa
gcctttttgaaaggcagcaccctggaggaggtctacgcttctgtggccaaggtggctgat
tattggctggatgtgctctacagcaaggctgccaacatgcctgattcagagctgtttgag
ctcatctcagagaaccggtccatgtcacgcaaactggaggactacggggagcagaaatcc
acctccatcagcactgccaagcgcctagcagagtttttgggggaccagatggtgaaggat
gcagggctgagctgtcgcttcatcatttcgaagaaaccagaagggtctccagtcactgag
agggccattccccttgccatcttccaagccgagcccagcgtgcgcaagcactacctccga
aaatggctgaagagcccctcgctgcaggacttcaacatccgtacaatcctagactgggac
tactacattgagagactgggcagcaccatccagaaaatcatcaccattcctgcagccctg
cagcaggtaaagaacccagtgccacgggtccgacacccggactggcttcataagaaactc
ctggagaagaatgatgtgtacaaacagaaaaaaatcaatgagctctttatttcagaaggc
aaaaaacaggttcttgcctgccagcctgtggaggggacacccagctcacaggtgggtgac
atagaggattttaggactgtcaagatccgtcagccactgattcccatagcaaataagcgg
aagcgcatccctgcagcagaggaaagccaacagctgtcccaggacctggagctgtcccag
tcctggcgggagatcctgggaccacctcccccttttggcaccaccaaggaagagcatctg
gtctggctgcgcttccaccagaagaagtgggggttgcaggctcggcagcgacaggagcag
cggaagaggcggcggctggaggatgatggggtagtgacaggtggaggagcagtccgtgat
gcactctccaaagggctgggcagttacctgcgccggagagcacgcagcatcctggacttg
ccctggcaggtcgtgcagatcgctgagaccggccagcctgggctgtttcggctgtgggca
gtgatagggagtgacctgcactgcatcaagctgagcatcccccgtgttttctatgtcaac
cagcgcatcccaaagcctgaggagggaacagcctgcaggaaggtaaacaggatcctgccc
cgctcaaacttagtttacaacttgtacgaatactctgttcctgaagacatgtaccaagag
cacattaatgaaatcaatgcagacctctctgctccagacattgagggagtgtatgagaca
caggtgccactgctcttccgtgccctcatccacctgggctgtgtgtgcatggtcagcagg
cagctcgtccagcacctagcagggcgagaggctgaaaccttcaacattgagcacctggag
atgcgctcactggcccagttcacttacctggagccaggaagcattcgccacatctacctg
taccacagctcccagggcagcagggcactcctgggcctcttcatcccctcacagcgcaag
gctgccatcttcgtgctggacaaggtacgaagtaaccagatgccaaacctcaccaccttg
ttctcggtggagcgtgcagctctgctggaaaaggtgggcaaggaactgttgcccccagac
aaacacaccttcgaggtgcgcgctgagactgaccccaatgccatctacagaggtgtccag
cggatgctcttgggctacaaggatgagcgccggggccccacgttggtggctgtgcagtcc
aactgggacctgaaacggctggcaagtgggatccccaccattgaggagttccccttggtc
cccatccggctggtagatgacatcagctactcggtcctggactggcagcgccatgccgcc
cgtcgcatgatccgccactatctcaacctagacacctgcctctcccaggcttttgagatg
agcaggtactaccacatccccattgggaacctccctgatgacatttccacctttggctct
gacctattcttctcacgccacctgtgtcgtcacaaccatctgttgtggctgtcccccacg
gcccgccccgacctgggggggaaggaggctgatgacaaccgtctggtcatggagtttgat
gagagagcctcagttgagatcaacaaccctggctgctactcgacagtgtgtctggagctg
gacatccagagcctggctgtgaacactgtgttgcagtcccaccatgtgaatgacatggaa
ggaggctccagcatgagcattagcttcgatgtgattcagcaggcatccctggaggacatg
gtaacagggaaccaagctgtgaacatcccagccagctatgatgagactgcactctgctcc
aacgctttcaggattttgaagagcatggtggtgagctgggtgaaggagattacgcagtac
cacaacgtctatgcagacaaccaggtcattcacttttaccgctggctccgctctccttcc
tccctgctctatgacccagcactgcaccgcatgctccacaacatgatgaagaagcttttc
ctgcagctggtggccgagttcaagcgcctgggctcctctgtggtctatgccaacttcaac
cgcatcatcctgtgcaccaagaagcggcgtattgaggatgccatcagctacatggagtac
atcatcaacagcatccactccaaggagatcttccactctctgaccatctcattctcccgc
tgctgggagttcctgctctggatggacccagcaaattatggaggtatcaagggaagagtg
gattcacgcatccactatggggagaaggacaccagcaagaagcaggcattggaggaggag
gagagcgaggaggaggaggaggaggtggcgagggaagaagaggaggaggaaggggagcca
gatgtggaggagctgctggagaacagctggaacatcgcacagtttctgccccaggctggc
tcctgccagagttactttttgatgattgtatcagcctacatcgtggctgtgtaccacagc
atgaaggaggaactgcagcgtaacatctctgggagcacccccatcaagagaaggagcact
agccaggtgtcccaggaggcgctgggggagctaagggccatgcctggcatgatcacattc
tcacaagattatgtggccaatgagctcactcaaagcttcttcaccatcacccagaagatc
cagaagaagatggctggttcccagaatgccacagagccctcagacatgttcccagtcctg
cctggctcctacctgccactcaacaacccagctctggagttcatcaaatacgtttgcaag
gtcctctccctggatgccaacataactaaccaggtgaacaaactacgccgggacctgctg
cgcctcatcgaggtgggcgagttctcagaagcagcccagtttcaagacccttgccgctcc
tatgtgcttcctgaagtcatctgcaggaactgcaatttctgcagggacctggacctgtgc
aaggacccttccctttcccaggacaggttggtgctacccagctggcactgccccaactgc
catgtgcagtacgatatcgttgccatcgagatggcactggtggaagccctgcagaagaag
ctgatggccttcatgctgcaggacctggtgtgcaaaaagtgtcatgctgtgaaggagaca
cacatgcctgtgtactgcagctgcgctggagacttcgccctcaccatctcctcccaggcc
ttcatggaccatgtcagtgtcttccagaacattgcccggcactatggcatggcctacctg
ctggaaaccattgagtggctgctgcacactaacctccagctccagcagtga
DBGET
integrated database retrieval system
