Cinclus cinclus (white-throated dipper): 134051303
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Entry
134051303 CDS
T10813
Symbol
SS18L1
Name
(RefSeq) calcium-responsive transactivator
KO
K15623
protein SSXT
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
134051303 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccic03036
]
134051303 (SS18L1)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
134051303 (SS18L1)
GBAF(ncBAF) complex
134051303 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
134051303
NCBI-ProteinID:
XP_062360960
LinkDB
All DBs
Position
18:complement(10959689..10971369)
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AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNINLGPGGMSQSAANQSLHSQSNLSDAIGTGLPPSSLMQ
SQISNGPNHVSMQQSGQNTMPTTSLSMTVSSHGTGPGYSHAVPASQNVPMQGQGSIGNYV
SRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQSSIAMMSQSNQGNSMMGQRPMGP
YRASQQGSSQQYMGQEEYYSEQYSHGQGSSEPMNQQYYPDGHGDYAYQQSSYTEQSYDRS
FDDSTQHYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPNQQSYPGQQQGYGPAQGASSQ
YSSYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttgcctttgcttctgctcgcccaagaggcaaaggggaggtcacccagcaaact
atccagaagatgctagatgaaaatcaccacctaatacaatgtattatggattatcagagc
aaggggaaaactgcagaatgtactcaataccaacaaatcttgcacagaaatctggtttat
ttggcaacaatagcagactctaaccagaatatgcagtccttgcttcctgctccaccaacg
caaaatataaacttgggcccgggagggatgagtcagagtgcagccaaccaatccctccac
tcgcagagcaatctcagcgatgccatcgggactggccttcctccttcctccctcatgcag
agtcagattagcaatggtcctaaccacgtgtctatgcagcagtcaggccagaacaccatg
cccacgacctccctgagtatgactgtcagcagccatgggactggccctgggtacagccac
gcagtgcctgcatctcagaatgtgccaatgcaaggccaggggtcaataggcaattatgtc
tctcgaacaaacatcaacatgcagtctaatccagtctccatgatgcaccagcaagcagca
acgtcacattacaactcggcacaaggagggagccagcactaccagggacaatcctccatt
gccatgatgagccagagcaaccaaggcaacagcatgatggggcagcgacccatgggccct
tacagagcttcacagcaaggttcctcacagcagtacatgggtcaagaagaatattacagt
gagcagtacagtcatggccaaggctcatcagaacctatgaatcagcaatactatccagat
ggacatggtgattatgcctatcagcagtcatcctatactgaacagagctacgaccggtcg
tttgatgactctacacaacactactatgaaggaggaaattctcagtacagccagcagcag
gcaggataccaacagggagctgcacaacagcaaacatattcccagcagcaatatccaaat
caacagagttacccaggacaacagcaaggatatggtcctgcacaaggagcctcttcacag
tattccagctaccaacagggacaggggcagcaatatggaagttacagagcttcccagaca
ggcccatccgctcagcaacagaggccttatggctatgagcagggacaatatggaaattac
cagcaataa
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