Cinclus cinclus (white-throated dipper): 134051349
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Entry
134051349 CDS
T10813
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccic03041
]
134051349 (RBM39)
Spliceosome [BR:
ccic03041
]
Common components
Common spliceosomal components
General mRNP proteins
134051349 (RBM39)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
134051349
NCBI-ProteinID:
XP_062361040
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All DBs
Position
18:2069820..2100466
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AA seq
522 aa
AA seq
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MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHDRKRSRSKERKRSRD
RERKKSRSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVTDLQTRLSQQNEVLAAAASVQPLATQCFQL
SNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAV
SALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatattgatattgaagcaatgcttgaagctccttacaagaaggatgagaac
aaattgagcagtgccaatggccatgaagaacgcagcaagaagagaaaaaagagcaagagc
cgaagtcgaagccatgacaggaagaggagcagaagtaaggaacgcaaacggagccgagat
cgggaacggaagaagagcagaagccgggaaaggaaacggagcagaagcaaagaacgcaga
cgcagccgctctaggagtagagatcgcagattcagaggccgctataggagtccctattct
ggtccaaaattcaacagtgccatcagagggaagattggtctgcctcacagcatcaaatta
agcagacgtcgctccagaagcaaaagtcctttcaggaaagacaaaagccctgttagagaa
ccaattgataatcttacccctgaggagagggatgctcgaacagtgttctgcatgcagttg
gctgcaagaattcgaccaagagacctagaagaatttttctccacagtagggaaggttcgt
gatgtgcgaatgatttcagatagaaattccagacgttcaaagggaattgcttatgttgaa
tttgttgatgttagttcagtgcccttggcaataggactgactggacagagagtcctgggt
gtacctattatagtacaggcatcacaggcagagaaaaacagagcagcagcaatggcaaat
aatctgcagaagggcagtgctggtcctatgagactctatgtgggatcattacacttcaac
ataactgaagatatgcttcgaggaattttcgagccatttggcaggattgaaagtattcag
ctcatgatggacagtgaaactggacgctcaaaaggatatggattcattacgttctcagac
tctgagtgtgccaaaaaggccctggaacaacttaatggatttgagctggctgggaggcca
atgaaagttggacatgtaactgagcgtactgatgcttccagtgctagctcttttttggac
agtgatgagttggaacggactggaattgacttgggaacaactggtcgccttcagctaatg
gcaagacttgcagaaggtactggtttgcagattcctccagctgcacagcaggctctgcag
atgagcgggtctttggcctttggagctgtgacagatttacaaacgagactttctcagcag
aatgaagttctggctgcagctgcttctgtacagccacttgcaacacagtgcttccagctt
tccaacatgtttaatcctcaaactgaagaagaagctggctgggacacagaaattaaggat
gatgtgattgaggaatgtaacaaacatggaggagttatccacatctacgttgacaaaaac
tcagctcagggcaatgtgtatgtcaaatgtccctccattgctgctgccatcgcggctgtc
agtgctttgcatgggaggtggtttgcaggtaaaatgattacagcagcgtatgtacctctt
ccaacataccacagccttttcccagactctatgactgcaacccaactactggttcctgtt
cgacgatga
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