Cinclus cinclus (white-throated dipper): 134051418
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Entry
134051418 CDS
T10813
Symbol
GDF5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04060
Cytokine-cytokine receptor interaction
ccic04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134051418 (GDF5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
134051418 (GDF5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ccic04052
]
134051418 (GDF5)
Cytokines and neuropeptides [BR:
ccic04052
]
Cytokines
Transforming growth factors (RSTK binding)
134051418 (GDF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
RBD_ZCCHC3_2nd
Motif
Other DBs
NCBI-GeneID:
134051418
NCBI-ProteinID:
XP_062361134
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Position
18:complement(819424..822482)
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AA seq
500 aa
AA seq
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MKILHFLTLLLWHLTWLSLDLVPGALSNSEAGQGNPGSKLGFLKAEGKERNPSTQAGTLR
TASHGYRAGTLKARTKSSAVQAGALLAKNDDSKKVPSRTAATEGKVGHVPSRPSGVRTVT
PKVQNLSSKVALKKTGTSSTDSDSFKTKKTKERVTQREAKETFRHPPITPHEYMLSLYRT
LSDGERKGVNGSVKLEAGLANTITSFIDKGQDERASTIRKQKYIFDISALEKDGLLGAEL
RILRKKPSDTWKSHSSGKTSQVKLFSCSTNRQASTLLDSRTVSITDTPKWEVFDIWKLFR
NFKNLVNLCFELETFDRGRAVDLRSVGFNRTGRQVNEKALFLVFGRTKKRDLFFNEIKAR
SGQDDKTVYEYLFNQRRKRRAPLATRQGKRPTKNLKVRCSRKALHVNFKDMGWDDWIIAP
LEYEAYHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTQLSPISILFIDS
ANNVVYKQYEDMVVESCGCR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccttcattttctcactttactgctttggcatttgacttggttgtctctggat
ctagttcctggagcactgagtaattctgaagcaggccagggtaatccaggatctaaacta
ggttttttaaaagcagaaggaaaggagaggaatccttccacacaggcaggtacactgagg
actgcaagccatggatacagagctgggaccttaaaggccagaactaaaagcagtgctgtt
caggctggagctctgctggccaagaacgatgactcaaagaaggtaccctcaagaacagca
gccacagagggcaaggtaggacatgtccccagcagaccttctggagtaaggacagtaact
ccaaaggttcaaaatcttagcagcaaggtggctttgaaaaaaactggcacaagcagtact
gacagtgattctttcaaaaccaaaaagactaaagagcgtgtaacccagagggaagctaag
gaaactttccgacatcccccgataacgccacacgaatacatgctctctttgtacaggact
ctctcagatggagaaagaaagggtgttaatggaagcgtaaaactggaggctggacttgcc
aatacaataaccagctttatagacaaaggacaagatgagcgagcatcaactataagaaaa
caaaaatatatttttgacatcagtgcattagaaaaagatggtttgctgggagcagagctt
cgaatattgagaaaaaaaccttctgatacatggaagtctcattcttctggaaaaacttcc
caagtgaaattgtttagctgctctacaaacagacaagcctcaacactcttagactctcgg
actgtcagtatcactgatacacccaagtgggaagtgtttgacatctggaaacttttcaga
aactttaaaaacttggttaacttgtgttttgaactggaaacttttgacagggggagagct
gttgatctcaggagtgtgggatttaatagaacaggaaggcaggtcaatgaaaaggctctg
ttcttggtgtttgggaggaccaaaaaaagagacttgttcttcaatgaaatcaaagctaga
tctggccaagacgacaaaactgtttatgagtacttgttcaaccagaggcggaagagaaga
gctcctctagcaacacggcaagggaagaggcccaccaagaatctgaaggtgaggtgtagc
agaaaagccctccacgtgaattttaaggatatgggctgggatgactggataatagctcct
ctggaatatgaggcatatcactgtgaagggctctgtgaattccccctccgatcccacctg
gagcccaccaaccacgcagttatccagacattaatgaactcgatggaccccgaatccacc
cccccaacttgctgtgtgccaacccagctgagccccatcagtatccttttcattgactct
gcaaacaatgtggtctacaagcagtacgaggacatggtggtggagtcgtgtggttgtagg
tag
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