Cinclus cinclus (white-throated dipper): 134051426
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Entry
134051426 CDS
T10813
Symbol
DDX27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccic03041
]
134051426 (DDX27)
03009 Ribosome biogenesis [BR:
ccic03009
]
134051426 (DDX27)
Enzymes [BR:
ccic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134051426 (DDX27)
Spliceosome [BR:
ccic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
134051426 (DDX27)
Ribosome biogenesis [BR:
ccic03009
]
Eukaryotic type
Pre-60S particles
Helicases
134051426 (DDX27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
FerA
AAA_22
Cas3-like_C_2
PRK
Motif
Other DBs
NCBI-GeneID:
134051426
NCBI-ProteinID:
XP_062361147
LinkDB
All DBs
Position
18:7450391..7456784
Genome browser
AA seq
757 aa
AA seq
DB search
MATLESLGLVGTIAEGDVVPVDSESEVSEDEEELRRAPGPRRRGGRSRGDFSADFVFGEA
DAGGEDAWTAALRQLRGKKAATTLDEKIEKVRQKRKLQEREAKQAKVKDEDAEAENDQTK
KECEDCDRDEDVESEYSLDDESIFTKADKVKVKEKKRSKKGEVEAEGFSEDASQYDDNLS
FQDMNLSRPLLKAITALGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFILPVLER
LIYKPRQAPITRVLVLVPTRELGIQVHSVTKQLAQFSSVTTCLAVGGLDVKTQEAALRSG
PDILIATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDEYFEEQMKEIIRLCSHHRQTM
LFSATMTEEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVTALLT
RTFQDHVMLFTQTKKQAHRMHILLGLMGLRVGELHGNLSQTQRLESLRRFKDEQIDILVA
TDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGKAGRSVSLVGEEERKMLKEIV
KTAKTAVKARILPQDVILKFREKIENLEKDIYAVLCLEREEREMQQSEAQINKAKKQLET
GKKEAGSESLERSWFQTREERKKEKLAKALQEFDLALRGKKKRKKFVQDTQKKAQMTPEE
RSQFEILKSQMYAERLAKRNRRAKRARALPEEEPAAAPAGPKKKKKLSVFDEELTNTSRK
ALKQYRAGPSFEDRKRLGIAQRRKGGNFKSKSRYKRK
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggccacgctggagagcctgggcctagtgggcaccatcgccgagggggacgtggtgccc
gtggactccgaatcggaggtctccgaggatgaggaggagctgcgccgggcgccgggcccc
aggcggcgggggggacgctcccgcggggacttcagcgccgacttcgtgttcggggaagcg
gacgccggcggggaggatgcctggacggcggcgctgcggcagctccgcggcaagaaagca
gctacgacgctggatgagaagattgagaaagtgagacagaaaaggaagctccaggaaagg
gaagctaaacaagcaaaagtaaaagatgaggatgcagaggctgaaaatgaccaaacaaaa
aaggagtgtgaggattgtgatagggatgaagatgtggagtctgagtattcactggatgat
gaaagtatcttcacaaaagcagataaggtcaaagtgaaggagaagaagagatcaaaaaag
ggcgaagtggaagcagagggcttttctgaagatgcctctcaatatgatgataacttgtca
ttccaggacatgaatctttcacgacctttgctaaaggcaatcacagctcttggcttcaag
caaccaaccccaattcagaaggcttgtatcccagtgggtcttctgggaaaggatatttgt
gcttgtgctgcgactgggacaggtaaaacagctgccttcatcttgcctgtccttgagcgc
ctgatttacaaacctcgtcaggctccaataacacgtgtactggttctggtgccaacacga
gaactgggtattcaggtgcattctgtcacaaaacagctggcacagttcagcagtgtcaca
acttgcctggcagtaggtggcctggatgtgaagactcaagaagctgctctgcgctcaggg
ccagacattcttattgcaactcctgggcgactgattgatcatctccacaactgcccttct
ttccacctgagcagtgttgaggtgctgattttggatgaagcagacaggatgctggatgaa
tactttgaggaacagatgaaggaaataatcaggttgtgttcccaccaccgtcagacaatg
cttttctctgccaccatgactgaggaggtgaaagatttggcttctgtttccctgaaaaat
cccgtccgaatttttgtgaacagcaacacagatgttgcgcctttcctgcggcaggaattt
atccggatcagacccaaccgggagggagaccgggaggccattgtaacagctctgctgaca
cgaacgttccaagatcacgtgatgcttttcacccagaccaagaagcaagcccaccgcatg
cacatcctgctcggactgatgggcctgcgggttggggagcttcatgggaacctctctcag
acacagcgcctggaatcactcaggcgctttaaggatgagcagattgatatcctggtagct
acagatgtggctgcgcgtggactcgatattgaaggtgttaaaacagtaatcaattttacc
atgcctaacaccatcaaacactatgtccaccgtgtgggtcggacagccagggcaggcaag
gctggtcgttcagtttcacttgtgggtgaggaagagcgcaagatgctgaaggagattgtc
aagactgctaaaacagcagtgaaagccagaatccttccccaagatgtcatattgaaattt
cgggagaagattgagaatctagagaaagatatctatgcagttctctgcttggagcgtgag
gaacgtgagatgcagcagtcagaggcccagatcaacaaggcaaagaagcagctggagaca
ggaaaaaaagaggctgggagtgagagtttggagcgcagctggttccagacccgtgaggag
aggaagaaagagaaattggctaaagccctgcaggaatttgacctagcattacgagggaaa
aagaaaaggaagaaatttgtacaggacacacagaaaaaagcccaaatgacaccagaggaa
aggtcacagtttgagattttgaaatctcaaatgtatgctgagcggctggcaaagaggaat
cgccgagcaaagagagccagagccttgccagaagaggagccagcagcagcaccagcaggt
cccaagaagaagaaaaaattgtctgtgtttgatgaagagctgaccaacacgagcaggaag
gctctgaagcaataccgtgctggcccatcatttgaagatcgaaaacgcttgggtattgcc
cagcgcaggaaaggaggaaacttcaaatccaagtccaggtataagagaaagtaa
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