Cinclus cinclus (white-throated dipper): 134051522
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Entry
134051522 CDS
T10813
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03022
Basal transcription factors
Brite
Transcription machinery [BR:
ccic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
134051522 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
134051522 (TAF4)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
134051522 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134051522
NCBI-ProteinID:
XP_062361300
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All DBs
Position
18:11005738..11041349
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AA seq
1103 aa
AA seq
DB search
MAAGSDLLDEVFLNTEVDEKVVSDLVGSLESQLAASGHHHQHHKAQEPLRAAGGLLGNHV
VSSSSSSSSPSPSPGGVVVGGNANAQTESSSGSKMGLSAPEITKAGAGGVQGGVINHNTR
SQTSALDGATTTSTSTTTAAAGGSEVTAAPGTLSQGKSVVISTMATALSTRNGKIGTTTV
QTLNGSNVVMNSHHTGSAAFSGTPVTANPTPAPAVAPLVNNGPGSVGKGNAVNAVLPSAS
NTVIQTSFLNTAVSSASSSSPTVISSQPPPSVGTGAPTVTLVRPPIHTAGPTVAAAAAAT
QNGSNTVINSTISVGSFPAVATATVGSGVSLQTSLVNSQSGSTVPAAPATQVIKSESPKT
IVQAVSQQQTLATGGQPSTTGGNMIIGQTMQAGLSNVAPNPGGIPPAAPGTPTGMAKGTA
NTVAQSLPRTPTPTTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQL
LMIPQQALAQMQAQAHAQSQPQSTLTPRPATPTSAPPVQISTVQAPGTPIIARQVTPTTI
IKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGTAQTTTLGTATAVQTGTPQRTVQGTTATS
TAATETMENVKKCKNFLSTLIKLASSGKQSSETAANVKELVQNLLDGKIEPEDFTSRLYR
ELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQATIATIPSAAAVLLSSS
VQRTAGKATATVTSTLQQPVISLTQPTQVGVTKQGQSTPLVIQQSQKAGALIRPPQVTLT
QTPMVALRQPHSRIMLTTPQIQLNQLQTVPVVKPAVLPGNKAIATVSTQVAAAQKNKLKE
PGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLFPAPLQRRI
LEIGKKHGITEIHPDVVSYVSHATQQRLQNLVEKLSETAQQRNISYKDDERYEQASDVRA
QLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQR
DANLTALAAIGPRKKRKVDSPGSGSGTEGSGSSAAVPGSSGVGTTRQFTRQRITRVNLRD
LIFCLENERETSHSLLLYKAFLK
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggatgaggttttcctgaacacggaggtggatgagaag
gtggtgagcgacctggtgggctccctggagtcccagctggcggcctccggccaccaccac
cagcaccacaaggcgcaggagcccctgagggccgctggggggctgctggggaaccatgtt
gtgagcagcagcagtagcagcagcagccctagccccagccctggaggagtagtagtagga
ggcaatgctaatgcccaaacagagagcagcagcggcagcaagatgggactgagtgcccca
gagatcacaaaagcaggggcaggaggagtgcaggggggtgttattaaccataacacccgg
tcccagacttcagctctggatggagccaccacaacgagcaccagcaccaccactgcagca
gcaggaggatctgaagtcactgctgctccagggaccctcagtcagggcaaatcggtggtt
atcagcaccatggcaactgccttgtccaccaggaatggcaaaattgggaccacgacagtg
cagactttgaatgggagtaacgtggtgatgaactctcaccacacaggaagtgctgctttc
tctgggactcccgtgactgccaaccccactcctgcacctgctgttgcccctctcgttaac
aatggacctggatctgtggggaaaggaaacgctgttaatgctgttttgccctcagcttct
aacactgtcatccagacttctttccttaatactgctgtgtcctctgcatcctcctcctcg
cccacagtgatctcctcgcagccaccaccgagcgttggcaccggggcgcccacggtaacg
ctcgtgaggcccccgatccacacagcaggacccacggtggctgcagctgctgcagccact
cagaatgggagcaatactgtgatcaattcaaccatcagtgtggggagttttcctgctgtt
gccacagccactgtgggatctggagtttccctccagacgtcacttgtgaacagccagtct
ggttccactgtgccagcagctcctgccacacaggtcatcaaatctgaatctcctaaaact
atagtccaggcagtatcccaacagcagacgctggctactggtggccagcccagtactaca
gggggtaacatgattattgggcaaactatgcaagctgggctgtccaatgttgctcccaat
cctggtgggatacctcctgcagctcctggcacacccacaggaatggctaaaggcactgcc
aatacagtggcacaaagtctgccaaggactccaacaccaactacgagtggaatcagagca
actttgactcctacagttttagcacctcgtttgcctcagccacctcagaatccgactaac
attcagaattttcagttaccaccaggcatggtcctggtgcgcagtgagaacgggcagctg
ctgatgatcccccagcaggccctggcacagatgcaggcacaggcacacgcccagtctcag
cctcagagcactctgactcctcgtcctgctacacctaccagtgcacccccagtgcagata
tccacagtgcaggctccaggaacacccattattgcacgacaggtgacaccaactactatc
atcaagcaagtgtctcaggctcaaacaacagtgcaacccacgacaacgctacagcgtccc
ccggttgtgcaacctcagattgttctgggtggtactgcacaaacaaccacgttggggaca
gcaacagctgtacaaactggaactcctcagagaacagtgcaagggacaacggccacctcc
actgctgccacagaaactatggaaaatgtgaagaaatgcaaaaactttctgtccacgtta
ataaaactggcatcatctggaaaacagtcctcagagactgcagctaatgtgaaggaatta
gtacagaatctgctggatggaaaaattgagccagaagactttaccagtaggctctacaga
gaacttaattcttcacctcaaccttaccttgtgcctttcttgaagaggagtttacctgcc
ttgagacagttaacaccagactctgcagctttcattcagcagagccagcagcagcagccg
acgacgcaggcgacgatagccacgatcccgtcggcggcggccgtgctgctgagctcctcg
gtgcagcgcacggcgggcaaggccactgccactgtcaccagtaccctccagcagcctgtc
atcagcctcactcagcccacacaagttggtgtcactaaacaagggcagtccacgccactg
gttatccaacagtctcaaaaagcaggggcgttgataaggcctccacaagtaacattgaca
cagacacccatggtggcattgcggcagccacacagtcgtattatgctcactactcctcaa
atccaactgaatcaacttcagacagtacctgtggtaaaaccagcagtattacctggaaac
aaagctattgccactgtttcgacacaagtagctgctgctcagaagaataaactgaaagaa
cctgggggaggctcttttagggatgatgatgacattaatgatgttgcatcaatggctgga
gtcaacctgtcagaagaaagtgctcggatattggcaacaaactctgagcttgtgggcacg
ttaacaaggtcctgtaaagatgaaaccttccttttcccagcacctttacaaagaaggata
ttagaaataggtaaaaaacatggaataacagaaatccatcctgatgtagttagctacgta
tcacatgctacacaacaaagactacaaaacctcgtggaaaaactatcagagactgctcaa
caaaggaatatttcctacaaggatgatgaaagatatgaacaagcaagtgacgttcgggca
cagctcaagttctttgaacaacttgatcaaatagaaaagcagcgtaaagatgaacaagaa
agggaaattttaatgcgtgcagcaaagtctcgatctcgacaagaagatccagaacagctt
aggttgaaacagaaggcaaaggagatgcagcagcaagagctagcacagatgagacagagg
gatgccaacctgactgcgttagctgccatcggtcccaggaagaaaaggaaagtagactca
ccaggatctggatcagggacagagggatctggttcgagtgcagcagtcccaggcagctct
ggagttggaacaaccagacagtttacgcgacaaaggataacgcgggtgaacctcagggac
ctcatattttgtttagaaaatgagcgagagacaagccattcactattgctatacaaagca
ttccttaagtaa
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