Cinclus cinclus (white-throated dipper): 134051612
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Entry
134051612 CDS
T10813
Symbol
CDK9
Name
(RefSeq) cyclin-dependent kinase 9 isoform X1
KO
K02211
cyclin-dependent kinase 9 [EC:
2.7.11.22
2.7.11.23
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
134051612 (CDK9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ccic01001
]
134051612 (CDK9)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccic03021
]
134051612 (CDK9)
Enzymes [BR:
ccic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
134051612 (CDK9)
2.7.11.23 [RNA-polymerase]-subunit kinase
134051612 (CDK9)
Protein kinases [BR:
ccic01001
]
Serine/threonine kinases: CMGC group
CDK family
134051612 (CDK9)
Transcription machinery [BR:
ccic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
134051612 (CDK9)
Brd4/P-TEFb complex
134051612 (CDK9)
7SK RNP complex
134051612 (CDK9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Haspin_kinase
ABC1
Motif
Other DBs
NCBI-GeneID:
134051612
NCBI-ProteinID:
XP_062361451
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Position
19:6196004..6201354
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AA seq
429 aa
AA seq
DB search
MAKQYDMVECPFCDEVSKYEKLAKIGQGTFGEVFKAKHRQTGKKVALKKVLMENEKEGFP
ITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNAHVK
FTLSEIKKVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS
QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLTL
ISQLCGSITPEVRARVGMSCGEQECGEILRLGTPASSLPCVLAAVCSQQWGVPAAASEAG
ESSSLCFGVVSQTNTLNFCSKKGGGFYSEVFCTGHLEKPLEFCLVICGIRSALPLTRPLL
SSSFISSSSCPLVGSKLRDLSPDWDLQDVVLAAAESSSCCCSHYVNTLKALSLACSYLLW
YLPDRDKCW
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcagtatgacatggtcgagtgccccttctgcgacgaggtctccaagtacgag
aagctcgccaagatcgggcagggcacgttcggggaagttttcaaagccaagcatcgccag
acaggcaagaaagtagcactgaagaaggtgttgatggaaaatgaaaaggaagggtttccc
atcacagccttgcgagagattaaaatcctccagctgctcaaacatgagaatgtggtgaac
ctcatagaaatctgcagaaccaaagcttctccgtacaaccggtgcaagggcagcatctac
cttgtgtttgacttctgtgagcatgacctggctggccttctcagcaacgcccatgtcaag
ttcacactgtcagagatcaaaaaagttatgcagatgcttctgaatggactttactacatc
cacaggaacaagatcttgcaccgagacatgaaagcagcgaatgtcctgatcactcgggat
ggagtcctgaagctggcagactttgggctggctcgagctttcagcctggctaagaacagt
cagccaaaccgctacaccaaccgtgtggtgaccctgtggtatcggcccccagagctgctc
ctaggggagcgtgactatggcccccccattgatctctggggtgcaggctgcatcatggca
gaaatgtggacccgcagccccatcatgcaggggaacacggagcagcatcagctcaccctc
atcagccagctctgtggatccatcacaccagaggtgcgggccagagtgggaatgagctgt
ggagagcaggagtgtggggagattctgcgactaggcactccagcctcttccctgccctgt
gtgctggctgctgtatgctcccagcagtggggtgtacctgctgctgccagcgaggctgga
gaatcttctagcctgtgttttggggttgtctctcagacaaacaccctcaatttctgctca
aagaagggtggaggtttttattctgaggtgttttgcactggtcaccttgaaaaacctctt
gaattctgtcttgtgatttgcggcatcagatcagctctgcccctcacccggccccttctc
agctcctcctttatcagcagctcgtcctgccctcttgtggggagcaagctgagagatctc
agcccggactgggatctgcaggatgttgtgctggcagctgcagagtcctcatcctgctgt
tgcagtcattatgtaaatacactgaaggcgctttctttggcatgtagctacctgctgtgg
tatctcccagatcgagataagtgctggtga
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