Cinclus cinclus (white-throated dipper): 134051713
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Entry
134051713 CDS
T10813
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134051713 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccic03041
]
134051713 (PRPF4)
Spliceosome [BR:
ccic03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
134051713 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
WD_LRWD1
WD40_like
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
134051713
NCBI-ProteinID:
XP_062361652
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Position
19:10083844..10092964
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AA seq
529 aa
AA seq
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MATARALAARGAARPPEPPKAKPAEEGEAPPAKRAPIFYGSLEEKERERLAKGESGLLGK
EGMKAAMEAGNINISSGEVFDLEDHMSERQAEVLAEFERRKRARQINVSTDDSEVKACLR
ALGEPITLFGEGPAERRERLRNILSVVGTDALKKTRKDDDRSKKSKEEYQQTWYHEGPRS
LKTARLWLANYSLPRAAKRLEEARLLKEIPEATRTSQRQELHKSLRSLNNFCSQIGDDRP
LSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNVGAIVFHPKATVSLDKKD
VSLASCAADGSVKLWNLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLE
AQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGI
NFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVRFEPNHGNFLLTGAYDNT
AKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWTAE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgcgcgggcactggcggcgcgcggcgcggcccggccccccgagccccccaag
gccaagcctgcagaggaaggcgaggcacccccggccaagcgggcgcccatcttctacggg
agcctggaggagaaggagcgcgagcgcctggccaaaggcgagtcagggctgctgggcaag
gagggcatgaaggctgccatggaggctggcaacatcaacatcagcagtggggaggtgttt
gacctcgaggaccacatgagcgagcgccaggccgaggtgctggcagagtttgagcgccgc
aagcgtgcccggcagatcaacgtctccacggatgactctgaggtcaaggcctgcctgagg
gccctgggcgagcccatcacgctcttcggagaggggcctgcggagcgcagggagaggttg
aggaacatcctctcagtggttggcacagatgcattaaaaaagaccagaaaagatgatgac
aggtcaaaaaagtccaaagaagagtatcagcaaacctggtaccacgagggcccacgcagt
ctgaaaacagccaggctgtggctggccaactactcactccccagggcggcaaagaggctg
gaggaggcccggctgctcaaggagattcccgaggccaccaggacatcccagaggcaggag
ctgcacaaatccctgcggtccttgaataatttctgcagtcagattggggatgatcgcccg
ctgtcctactgtcacttcagccccaactccaaactcctggccacagcctgctggagtggg
ctgtgcaagctctggtctgtgcctgactgcaacctggttcacaccttacgagggcacagc
accaatgtaggggcaatcgtgttccaccccaaggcgacggtgtccctggacaagaaggat
gtcagcctggcctcgtgtgcagccgatggctccgtcaaactctggaacctagaaagtgat
gagccggtggcagacatcgagggacacagcatgagagtggctcgtgtgatgtggcaccca
tctgggaggttcctgggcaccacctgctatgatcactcgtggcgcctctgggacctggag
gcccaggaggagatcctgcaccaggaggggcacagcaagggggtctatgacatcgccttc
cacaccgacggctccctcgctggcacgggaggcctggatgcctttggccgggtgtgggac
ctgcgcacaggccgctgtatcatgttcctggaagggcacctgaaggagatctatgggatc
aacttctccccaaatgggtaccacgtggccacgggcagtggggacaacacctgcaaggtg
tgggacctgcggcagaggaaatgcatctacaccatccctgcccaccagaacctggtcact
ggtgtcaggtttgaacccaaccacgggaatttcctgctcacaggtgcctacgacaacacg
gccaagatctggacccaccctggctggtccccactgaagacactggcggggcacgagggg
aaggtgatgggcctggacatctccctggatgggcagctcattgccacctgctcctacgac
agaaccttcaagctctggacagctgagtag
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