Cinclus cinclus (white-throated dipper): 134051782
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Entry
134051782 CDS
T10813
Name
(RefSeq) POU domain, class 5, transcription factor 3-like
KO
K09367
POU domain transcription factor, class 5
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccic03000
]
134051782
03021 Transcription machinery [BR:
ccic03021
]
134051782
Transcription factors [BR:
ccic03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
134051782
Transcription machinery [BR:
ccic03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
134051782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
134051782
NCBI-ProteinID:
XP_062361739
LinkDB
All DBs
Position
19:11170195..11174554
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AA seq
385 aa
AA seq
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MFSPDGGLPAAPFGLLTDAGPPFPRGSFDGAPAQPLFFPFAATAEPEPARDPPPARAWLP
PPAPAPPAKAEARPGRPCSQPEPEPRTAACCGPAWPPPPWAGPAPSGPTALPGPPFPGPA
ASAFPGPQLCPGALQPGSGGPSGLGSSGSSSGAASEGGHSSDSGEEDAPTSGELEQFAKD
LKHKRIMLGFTQADVGLALGTLYGKMFSQTTICRFEALQLSFKNMCKLKPLLQRWLNEAE
NTDNMQEMCNAEQVLAQARKRKRRTSIETNVKGTLESFFRKCVKPSPQEISQIAEDLNLD
KDVVRVWFCNRRQKGKRLLLPYSNEAEGMMYDMNQPLVPSTLPIPVTSQGYSLAPSPPVY
MPTFHKAEMFPQALQPGLSMSNSGH
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcccggacggggggctgccggccgccccctttggcctcctgaccgacgccgga
cctcccttcccccgcggcagcttcgacggggcgcccgcccagccgctcttcttccccttc
gccgccacagccgagcctgagcccgcccgcgacccaccgccggcccgcgcctggctgccc
ccgcctgcccccgcgccgcccgccaaggcggaggcgcgcccgggtcggccctgcagccag
cccgagcccgagccccgcaccgctgcttgctgcggcccggcctggccccctccgccctgg
gccggccctgcgccctccggccccacagcccttcccgggccgcccttccctggcccggcc
gcctctgccttccctggcccccagctctgccccggcgcgctgcagccgggctccggcggc
ccttcggggctggggagcagcggcagctccagcggcgccgccagcgagggcggacactcc
agcgacagcggtgaggaggatgcgccaacctcaggagagctggagcagttcgccaaggac
ctcaagcataagcgtatcatgctgggcttcacccaggctgacgtagggctggcactgggc
acactctacggaaagatgttcagccagacgaccatctgccgcttcgaagcactccagctc
agcttcaagaacatgtgcaagttaaagccgctgctgcagcgctggctcaatgaggcagag
aacacggacaacatgcaagagatgtgcaatgcagagcaagtactggcccaagcccggaag
agaaaacgcaggaccagcattgagaccaatgtgaaagggacactggagagcttcttccgc
aagtgcgtgaagcccagtccccaggagatctcccagattgccgaggacctcaacctggat
aaagatgtggtgcgggtctggttctgcaaccggcgtcagaaaggcaaacggctgctgctg
ccctatagcaatgaggcagagggcatgatgtatgacatgaaccagcccctggtgccctct
actctgcccatcccagtgacatcccagggctacagcctggcaccctcccctcctgtctac
atgccgaccttccacaaagctgagatgttccctcaagcgctgcagcctgggctctccatg
agtaacagcggccactga
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