Cinclus cinclus (white-throated dipper): 134051787
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Entry
134051787 CDS
T10813
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04010
MAPK signaling pathway
ccic04020
Calcium signaling pathway
Brite
Ion channels [BR:
ccic04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
134051787
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
134051787
NCBI-ProteinID:
XP_062361747
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All DBs
Position
19:complement(9073498..9361990)
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AA seq
2357 aa
AA seq
DB search
MARFGDDLPTRYGGGGPAGAGRGSSRQGGPQAGQRMYKQSMAQRARTMALYNPIPVKQNC
FTVNRSLFIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYMGK
FHKTCFSNETGEEVGDFPCGEEPPARQCESGTTCREYWQGPNYGITNFDNILFAVLTVFQ
CITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENR
RAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDGRAASEGPIPQGTAP
AETGSGSSYNMLKRAAIKKSKNDLIHAEEGEDHFTDICSVGSPFARASLKSGKNESSSYF
RRKEKMFRFFIRRMVKAQSFYWVVLCVVALNTLCVAMVHYDQPEKLTTALYFAEFVFLGL
FLTEMSLKMYGLGPRNYFHSSFNCFDFGVIVGSIFEVIWAAVKPGTSFGISVLRALRLLR
IFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFKDETPTT
NFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVHSGMFSSIYFIVLTLFGNYTLLNVF
LAIAVDNLANAQELTKDEEEMEEATNQKLALQKAKEVAEVSPMSAANISIAAKQQNSSKS
KSVWEQRTSQIRMHNFRASCEALYNELDPEERVRYATTLHIRPDMKTHLDRPLVVEPRSE
GRNNITKLSPVDVQEVVEHPKPTSTDGAEAPRKHHRHREKEKLGEQEKGDVTKDESGETG
AGNKEERHRQHRSRSKEVEGGSKEGKSDRNRGQEGGKRHHRRGSVEEGAEKEHRRHRSHR
HSSDRPGKEGNGTANGARGERRSRHRAGPRSANRDGEPGAKGDNGEEPHRRHRLRSRALS
TYESVEKDGVEKEGEAGEKEHRNHQPKENQCELEASGSGSGPGSVPVHTLPSTYLQKVPE
QPEDADNQKNVTRMIQPPLDKTTAVNIPVTITAPPGDTTVIPMNNVEFESKTEEKKDVDD
LTKNGPKPILPYSSMFILSPTNPIRRLFHYIVNLRYFEMVILIVIALSSIALAAEDPVQA
ESPRNDALKYLDYIFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFA
FSGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFI
FAVIAVQLFKGRFFYCTDESKELEKDCRGQYLDYEKNEVEAQPREWKKYEFHYDNVLWAL
LTLFTVSTGEGWPTVLKHSVDATYEEQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALI
IITFQEQGDKVMSECSLEKNERACIDFAISAKPLTRYMPQNKQSFQYKMWKFVVSPPFEY
FIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNIVFTSMFSMECVLKIIAFGVLNYFRDAW
NVFDFVTVLGSITDILVTEIADTDNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQS
FKALPYVCLLIAMLFFIYAIIGMQVFGNIALDDETSINRHNNFRTFLQALMLLFRSATGE
AWHEIMLSCLSNRACDPLSGLTKKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEY
LTRDSSILGPHHLDEFVRVWAEYDPAACCRIHYKDMYNLLRVIAPPLGLGKKCPHRVAYK
RLVRMNMPISPEDLTVHFTSTLMALIRTALEIKLASGGVKQHQCDAELRKEISLVWPNLS
QKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKNSREQVQPPGGLCQPGPVSLFHPLK
ATLEQTQPTTFSNAKAFLRQKSSASLNNGGALPPPEGGIKESSSWGTQRTQDVFYETRSP
AFERGHSEEIPIERVVEMKEISPTVANGEPQPGLESQGRAASMPRLAAETQRSKARSPGS
YLAPIPDTSPMKRSVSTLAPQRPHAMHLYEYSLERMPPEQGHHHHHHRCHRRKEKKQKSL
DRAAHHLPDGQAAQSGESSSKDKKQERGRSQERKQHSSSSSEKQRFYSCDRYGSRDRAQP
KSADQSRPTSPNGGPEHGPHRQGSGSVNGSPLLSTSGASTPCRGRRQLPQTPLTPRPSIT
YKTANSSPVHFTTFQTPTFSPGRLSRGLSEHNALLRGEQQPPPPAVARIGSDPYLGHRDT
AADSPQRAAPEDTLTFEEAVATNSGRSSRTSYVSSLTSQSHQIRRVPNGYHYTLGLSTGS
GARGRSYYHEADEDDWC
NT seq
7074 nt
NT seq
+upstream
nt +downstream
nt
atggctcggtttggggatgatctgccaacccgctatggaggtggagggccggccggggct
ggaagagggagcagccggcaaggtggcccccaagccggccaaaggatgtataaacagtcg
atggctcagagagccaggactatggctctctacaaccccatccctgtcaaacagaactgc
ttcacagtcaacagatccctcttcatcttcagtgaagataatgttatacggaaatacgcc
aagcgaataacagagtggcctccatttgaatacatgattttagctacaatcatagccaat
tgtattgtgctggctctggaacaacatttgccggatggagacaagacaccgatgtcagag
agactggatgacaccgagccgtactttattggaatattttgttttgaagctggtatcaaa
atcatcgctctgggctttgtttttcacaaaggctcttacctgaggaacggctggaacgtg
atggattttgttgtggtcctcacagggattctggcgactgctgggactgattttgacctg
cggaccctgcgagctgtgcgggtgctgcggcccctgaaactcgtgtcgggaatcccaagt
ctgcaggttgtcctcaaatccatcatgaaggccatggtgcccttgctgcagattgggctg
ctcctcttcttcgccatcgtgatgtttgccatcattgggctggagttttacatgggcaaa
ttccataaaacctgtttttccaacgagacaggtgaggaggtgggggattttccctgtgga
gaggagcctcctgccaggcagtgtgagagcgggaccacgtgcagggagtactggcagggt
cccaactatggcatcaccaactttgacaacatcctcttcgctgtgctcaccgtcttccag
tgcatcaccatggagggctggactgacatcctctacaacacaaatgatgctgcaggaaat
acctggaactggctttacttcatccctctcatcatcattggctctttcttcatgctcaac
ttggtgctgggcgtcttatcaggggaatttgccaaggagcgagagcgggtggagaaccgc
cgggcgttcctgaagctccgcaggcagcagcaaatcgagcgggagctcaacgggtacctg
gagtggatcttcaaagcagaggaggtcatgctggccgaggaggacaagaacgcggaggag
aagtcccctctggacgggagggccgcctcggaagggccgattcctcaaggcacggcgccg
gcagagactggcagcggcagcagctacaacatgttgaaaagagccgcaataaagaagagc
aaaaatgacctgattcatgcagaagaaggtgaggaccatttcacagacatttgctccgtt
gggtctccctttgcccgtgccagtttgaagagtgggaagaacgagagctcgtcctacttc
aggaggaaagagaagatgttccgcttcttcatccgccgcatggtgaaggctcagagcttc
tactgggtcgtgctctgcgtggtggccctcaacaccctgtgtgtggccatggtgcactat
gaccagcctgagaagctgaccactgctctctatttcgcagagtttgttttcctggggctg
ttcctcactgagatgtctttgaagatgtatgggctggggccaaggaattacttccactcc
tccttcaactgctttgattttggggtcatcgtgggcagcatttttgaggtgatttgggct
gcagtgaagccgggaacctcctttggcatcagcgtcctgcgcgccctgcggctgctgagg
attttcaaagtgacaaagtactggaattccctgaggaacctggtggtgtccttgctgaac
tccatgaaatccatcatcagtttgcttttcctgctgttcctgttcattgtggtctttgct
ctgctggggatgcagctctttggaggacagttcaatttcaaagatgaaactccaaccacg
aattttgataccttccctgctgccatcctcacagtcttccagatcctgactggggaggac
tggaatgctgtgatgtaccacgggatcgagtcgcagggcggtgtccactcgggaatgttc
tcctccatctacttcatcgtcctcaccctgtttggtaactatactctcctgaacgtcttc
ctggccatcgctgtggacaacctggccaacgcccaggagctgaccaaggatgaggaagag
atggaggaagccactaaccagaagctggccctgcagaaggccaaggaagtggccgaagtg
agccccatgtctgcagccaacatctccatagctgccaaacagcagaattcctccaaatcc
aagtcggtttgggagcagaggacgagccagatccggatgcacaacttccgagccagctgc
gaggcgctgtacaacgagctggaccccgaggagcgcgtccgctacgccaccaccctgcac
atccgacccgacatgaaaacccacctggaccggcctctggtcgtggagccccgcagcgaa
ggcaggaacaacatcaccaagctgagccccgtggatgtccaggaggtggtggagcacccc
aaaccaacctccaccgacggggcagaagcaccacggaagcaccaccggcatcgggagaag
gagaagctgggagagcaagagaagggagacgtgaccaaggatgagagcggtgaaaccggg
gcgggcaacaaggaggagaggcacaggcagcaccggagccgcagcaaggaggtggaaggg
ggcagcaaggaagggaaaagcgacagaaacagggggcaggaaggggggaagaggcaccac
cgacggggctcggtggaggaaggggccgagaaggagcaccgcaggcaccgcagccaccgg
cactcgtccgaccggccgggcaaggagggcaatggcactgccaacggtgcccgcggtgag
cggcgctcccggcaccgcgctgggccccgctctgccaacagggatggagagcccggggcc
aagggggacaacggagaggagccccaccggcggcaccggctcaggagcagggcactgtcc
acctacgagtccgtggagaaggatggtgtggagaaggagggggaggctggcgagaaggag
caccggaatcaccagcccaaggagaaccagtgtgagctggaggccagtggcagtggcagt
ggccctgggagtgtccctgtgcacaccctgcccagcacttacctgcagaaggtgcccgag
cagccggaggatgctgacaaccagaagaatgtgacgaggatgattcagccccccctggac
aaaaccactgctgtgaacatccctgtcaccatcactgcccctccaggggacaccactgtc
attccaatgaacaacgtggagtttgaaagcaaaacagaggagaagaaggacgtcgatgac
ttgacgaaaaatgggcctaaaccaatcctgccttacagttccatgttcatcctcagtccc
acaaacccgatccggcgcctgttccactacatcgtcaacctgcgctactttgagatggtg
atcctgatcgtcatcgccctcagcagcatcgccctggctgcagaggaccctgtccaagct
gagtcccccaggaatgacgctctgaaatacctggattatatatttacaggagtcttcacc
tttgagatggtgatcaagatgattgacttggggctgctgctccaccctggctcctacttc
cgtgacctgtggaatatcctggacttcattgtggtcagtggggccttggtggcctttgcc
ttctcaggaaccaagggcaaggacatcaacaccatcaagtccctgcgggtcctgcgggtg
ctcaggcctctgaagaccataaaacggctgccaaaactgaaggctgtctttgactgcgtg
gtgaactccctgaagaacgtcctcaacatcctcatcgtttacatgctcttcatgttcatc
ttcgccgtcatcgccgtgcagctcttcaagggccgcttcttctactgcacggacgagtcc
aaggagctggagaaggactgcaggggtcagtacctcgattatgaaaaaaatgaggtggag
gcacagcccagggaatggaaaaaatacgagttccactacgacaatgtgctctgggctctg
ctcacgctcttcaccgtgtccacaggggaagggtggccaactgtgctgaagcactcggtg
gatgccacctacgaggaacaggggcccagccctggctaccggatggaaatgtccatcttt
tacgtggtgtattttgttgtcttcccttttttctttgtcaacatctttgtggcgttaatc
atcatcaccttccaggagcaaggagataaagtgatgtcagagtgcagcctcgagaaaaac
gagagagcctgcatagactttgccataagtgccaagcccctgacccgctacatgcctcag
aacaagcaatcctttcagtacaagatgtggaaattcgtggtgtcccctccctttgagtat
tttatcatggtcatgattgctctcaacaccattgtcctcatgatgaagttctatgatgct
ccagaagcatacgaagaaatgctgaaatgcctgaatattgtgtttacatccatgttttcc
atggaatgtgtgctgaagatcattgcctttggtgtactgaattatttccgagatgcctgg
aatgtctttgattttgtaacagtgttgggaagtattactgatattttagtaacagagatt
gcggacacggacaacttcatcaacctcagcttcctgcggctcttccgagcagcaaggctc
atcaagctcctccgccagggctacaccatccgcatcctgctctggacgttcgtgcagtcc
ttcaaggccttgccttatgtgtgtctcctcattgcaatgctcttcttcatctatgccatt
attggcatgcaggtatttgggaacattgccttagatgatgaaacctccattaataggcac
aacaacttcaggaccttcctccaagccctgatgctcctgttcaggagcgctacgggggaa
gcttggcatgagatcatgttgtcctgcttgagcaacagagcttgtgaccccctctctggc
ctcaccaaaaaggaatgtggcagtgattttgcctatttctacttcgtgtcattcattttc
ctctgctccttcctgatgctgaacctgttcgtggctgtgatcatggacaatttcgagtac
ctgacccgggactcctccatcctcgggccgcaccacctggacgagtttgtccgggtgtgg
gctgagtacgatcccgcagcctgttgccgcattcattataaggatatgtacaatttgtta
cgtgtaattgctccacccctgggcttaggaaagaagtgccctcatagggtggcctacaag
cgcctggtgaggatgaacatgcccatctctcctgaggatttaactgtgcacttcacctcc
acgctgatggccctgatccgaacagccctggagatcaaactggcctcaggtggtgtgaag
cagcaccagtgcgatgctgagctgaggaaggagatctcactggtctggcccaacctgtcc
cagaagactctggatttgctggtgcctcctcacaaacctgatgagatgactgtggggaag
gtctacgcagccctgatgatatttgacttctacaagcagaataagaacagcagggagcaa
gtccagccccctgggggcctgtgccagcccgggccggtgtccctgttccatcccttgaag
gccaccctggagcagacccagcccacgaccttcagcaatgccaaggctttcctgcgccag
aagagctcggcctccctcaacaacgggggagccttgccacccccagagggagggatcaaa
gagtccagttcttgggggacccagcgcacccaggatgtgttttatgaaaccagaagccca
gcttttgaaagaggccattccgaggagatccccattgagagggtggtggaaatgaaggag
atcagccccacagttgccaatggagagccccaaccaggtctggagagccagggcagggca
gcatccatgccacgcctggctgctgaaacccagaggagcaaagcgcggtcacctgggagt
tacctggcacccatcccggacacgagccccatgaagcgctccgtctccacgctggccccg
cagcgccctcacgccatgcatctctacgagtattccttggagaggatgcctccggagcaa
ggccaccaccaccaccaccaccgctgccaccggcgcaaagagaagaagcagaagtccttg
gatagggccgcccatcacttgcctgatggacaagctgcccagtctggagagtcttcctcc
aaggacaagaagcaggagcgtggccgctcccaggagaggaagcagcactcctcctcctcc
tccgaaaagcagcgcttctactcctgcgaccgctacggcagccgggaccgtgcccagccc
aaatctgctgaccagagcaggcccacctcccccaacgggggcccggagcatggcccacac
agacagggcagtggttcagttaatgggagccccttgctgtcgacatctggtgctagtacc
ccctgccggggtcggaggcagctcccacagactccactgaccccacgccccagcatcact
tacaagaccgctaactcctcgcccgtgcacttcaccactttccaaacccccacgttctcc
ccgggccgcctgagccgcgggctgtccgagcacaacgcgctgctgcggggggagcagcag
ccacccccacctgccgtggcccgcatcggctccgacccctacctgggccaccgagacacc
gccgccgatagcccgcagcgcgccgcgcccgaggacacgctcaccttcgaggaggccgtg
gccaccaactcgggccgctcctcaaggacttcctacgtctcctccctgacctcgcagtcg
caccaaatccgccgggtgcccaatgggtaccactacacgctggggctcagcacgggctcc
ggcgccagaggacgcagttactaccacgaagccgatgaggatgactggtgctag
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