Cinclus cinclus (white-throated dipper): 134051856
Help
Entry
134051856 CDS
T10813
Symbol
SEC16A
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134051856 (SEC16A)
Membrane trafficking [BR:
ccic04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
134051856 (SEC16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
134051856
NCBI-ProteinID:
XP_062361898
LinkDB
All DBs
Position
19:complement(2785030..2812098)
Genome browser
AA seq
2427 aa
AA seq
DB search
MQQPPQPVPPGAAPPPPAGVARNMYWRNSPLSKRANVAAVPPVQPVTDPFAFGRQTPQGS
PLDNPSKGNAPAFPQPALVHPPPARAGDSPHGPHASLLAPVSQAGISTSTFSNVPVPSPS
LGYVINSAAEGHPDADLGLRGPAVPLHYNPGAAVENSFGVHPGMVSAVNKPGARQDVGRD
PNDAPAAPNTAALFPPPPQQPGPQWRPVPGNLQSPVRNFVPYPEPAPQTDVQNISQPSGS
ASHPPPHTNVPQGPGHQGIPQNIVQAPLPAGFEKNGKNGPANSSHHMNSIQPGSVFRQNT
EMASPWLSQPYQEQFYPQPPLQDAGFVLPTAQENNPKNQSPAMSETSNRSIHTDRDPGTL
SMFFKGDEAENEEILSSEKNYVMEKTEFDACQQNLASLYHQPVHPQQVATNIVSQAQLAT
GSAGEMVQKGMDGQYFPKLVNHQEAQGAKHSLFARDDKAQVGDPAAGSQYENVENLECIQ
NQEVLPSEPQAISTSSPAAGPDPYRYGSFPGQMLPKNAAVSHAEGGPNLEAPDSLPHPVR
PDSVSSNYSNISHRSTSSSARPPEQVGTFIQQEIGKPDEESCASFFKQIDSSPLGGDSGE
LNLSKSYHGNLSQPPTPSPPKPTGVFQTSANSSFEPVRSHGVGLKPAEIDQAKMVVELRE
NHSNQKNIKKNAAVPAASPGNLEQPPDNLETIYMPQVHPGPLAGTGEAGNTLHSGPVVEN
IQSVSERRSSTRAQGAVKKCDSPATTLWAHNELPNFGGNVLLAPAAPAVYVPAKQTVEVI
QPPEEGLSNQQPCKPGTIAVQHSQDGNLTFENLENPPKMGEEEALQSQASSGYASLLSSP
PTESLQNQPILIAQPNQSYNLAQPINFSVSLSNQLSNNENNQPMKDSGVGDKPAMSPQTS
HAGGENMPLPVMQVGSLLVNALPNTNLLKHNLLQSPGNSSDAAANQPANLLMKTPLNLTP
EGQKNVNMEGLAPEFASKPGSNSSVSPGTDLPSGTASGLVPPVNSIAQANNSANQSSSKE
AAGVLDFTVSQTLEKSSASNSVQVHSQSPSGAPVQQVSSGAAQVHPEVPDKQHFYQQVTK
DVQHQAVAQGALPPQPQMQAAAQMQPPTSGQSSVPPDSQISTGAKAMQQGDSQVLGNRAQ
PGGPQEAGSAQPRYDQTSPGKQPASEQPPGAPAATAPPATTAQAVPPNGQQDLQRPPPPQ
TPQEAFGPPQNPYYYYRHPYDAYQAPYPPHYPPADPRTAAHLYYMEDSYGQYDPRYRHYD
SSSAYMEPGSYRYPEPERPSSRASHCSDRPSSRQGYPEDYYGKSGWSDYYSGYYPNSYDY
GDPSRWERYPYDPRYRDPRSYDQRYWYDAEHNPYQKREAYPYGSRNDRYDENWRYDPRFT
GSFDDDSEPHRDPYGDDFDQRSVHSEHSGHSLRSSRSVHSHHSSFSSRSQQSQLYRSNHD
LTGNAYETPAQAASLHADYPYGGYDPSFDGQQPFPDYGYPAETGWAAVEQAPLRPSTPEK
FSVPHICARFGPGGFLIKALPNLPSEGQPALVEIHSMETMLQHSPEQEEMRAFPGPLAKD
ETHKVDVINFAQSKAAQCFKNENLIDKESASLLWDFIVLLCRQNGTVVGTDLAELLLRDH
KTVWLPGKSPNEANLIDFTNEALEQAEEESGEAQLSFLTDNLLTTVDSFEKETERFRELL
LYGRKKDALESAMKHGLWGHALLLASKMDSRTHARVMTRFANSLPINDPLQTVYQLMSGR
MPAASTCCGDEKWGDWRPHLAMVLSNLTNNVDLESRTIATMGDTLASKGLLDAAHFCYLM
AQVGFGVYTRKTTKLVLIGSNHSLPFLKFATNEAIQRTEAYEYAQSLGSQPGCLPNFQVF
KFIYACRLAEMGLAAQAFHYCEVISRTVLKDPHYYSPVLIGQLIQMSSQLRLFDPQIKEK
PDQESFIEPSWLVTLRHVDGQIKEGAIAYNTDRSTPPPYESSTPSSELDRASQCDGGGGR
DVGPGAENALLASLLPNMAQQMQSVQLMPSVPQAVLDGSAAMIPPGDQGSVPFYPVAPQP
LGPGLGFAPQGFSNPYGTEPSPLYLGSTLPPGGPPQEVEPQPEEQTKLETGMQRIASESP
PQNSFPEQREDDFYGRMANMGYRQRSRTTSESSAHSVGRERSNSAAKQPSPPPSAPAGKD
TKKETKKEAAPRKSGATWFRWLMGKGKNEAHLPDDKNKSIVWDEQKQRWVNLDEPEEESK
PPPPPPTGFPKAAQAAPPGPGGPPGASVNVFSRRAAGSRARYVDVLNPGGTKASGAVPAP
SDLFAPLAPMPIPANVFVPNSVPGESQPMEGSGAAEQTPAANQTSTDPAAAVEPEYLNSA
ALPPGSGLHVPNPDGSQSGELSRSSSMSSLSREVSQHFNQPATVPPLGAPSAGAVPFYNP
SQFAQSPAATGSSRLGRIGQRKYPTLK
NT seq
7284 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagccaccgcagcccgtccctccaggagcggctcctcctcctcccgccggcgtg
gctcgcaacatgtactggaggaacagcccgctgagcaagcgggcaaacgtcgcagctgta
ccgccggtgcagcccgtgacagacccctttgccttcggcaggcaaaccccccagggctct
cctctggataatccatccaagggcaacgccccggcgttcccgcagccagccctggtgcat
cccccgcccgcccgcgccggggacagccctcacggaccacacgcgtctctgttagctcct
gtgtctcaggccgggatcagcaccagtaccttttctaatgttccagttccttctccgtcc
ctggggtatgttataaatagtgctgcagaagggcatcccgacgctgatctcggactccgt
gggcctgcagtgccgttgcattataacccaggagcagcagtggaaaattctttcggtgtg
catcctggaatggtgtctgcagtgaacaaacctggagctaggcaggatgttggcagggat
ccaaatgatgcacctgcagcacccaacacagcagcactcttcccaccacctccccagcag
cctgggccccagtggaggcctgtcccagggaatctgcagtctccagttcggaattttgtg
ccctatcctgagccagctcctcagactgatgttcagaacatttcccagccttccggcagc
gcttctcaccctcctccacacacaaatgtcccacagggtcctggacaccaggggattcca
cagaacattgtgcaagcgcctttacctgctggttttgagaagaatggcaaaaatggccct
gccaacagcagtcatcacatgaacagcatccagcctggcagtgtgtttaggcagaacaca
gaaatggctagcccttggttaagccaaccttaccaggagcagttctacccacagccacct
ttgcaagacgccggttttgtccttcccacagctcaggaaaacaaccccaaaaaccagtct
ccagctatgtctgaaacatcaaatagatctattcatacagatcgagatccaggaactctc
tccatgttttttaaaggggatgaggcagaaaatgaagaaatactttcatctgagaaaaac
tatgtaatggagaaaacagagtttgatgcctgtcagcaaaatttggcctccctgtatcac
cagcctgtgcatcctcagcaggtggcaaccaatattgtctctcaggcacagctggctaca
ggctcagctggtgagatggtacagaaaggaatggatggccagtacttccctaaactagtc
aaccatcaggaggcacagggtgctaagcactctctctttgctcgtgatgacaaggcacag
gtaggtgacccagctgctgggtcccagtatgaaaatgtggagaacctggagtgcattcag
aatcaggaagtgctgccaagtgaaccacaggccatcagtacttcctcccctgctgctggt
cccgatccgtacaggtacggatccttcccgggtcagatgcttccaaagaatgctgctgtg
agccatgctgaaggaggaccaaacctggaggcacctgattccttacctcaccctgtccga
cctgacagtgtctcttccaactacagcaacatcagccacaggagcacttccagctcagca
cggcccccagagcaggtcggtacatttatccagcaggaaattgggaagcctgatgaggaa
tcctgtgccagcttcttcaaacagattgactcctctcctctgggaggtgattcaggtgag
ctaaacctgagcaagagctaccacggcaatctatcccagcctcccactccaagccctcct
aagcctacaggagtgtttcagacaagtgcaaatagttcttttgaacctgtgaggtcccat
ggagttggtctaaaacctgcagagattgaccaagcaaagatggtggttgaattaagagag
aaccattcaaaccaaaagaatatcaagaagaacgcagcagtgcctgctgcatcccctggc
aatcttgaacagccaccagataatctggaaacaatttacatgcctcaggtacacccaggg
cctcttgcaggcactggggaagctggaaatacgctgcactcggggcctgttgtggaaaat
atacagtcagtatctgagagacggtcctcaaccagagctcagggagcagttaagaagtgt
gatagcccagcaacaaccttatgggctcacaatgagttaccaaattttgggggaaatgtt
ctcctagctcctgctgctcctgcagtgtatgtacctgccaaacagactgtggaagtcatc
cagccaccggaagaaggcctgtctaatcagcagccatgtaaaccagggactattgctgtg
cagcactcccaggatggaaatctaacttttgaaaatcttgagaatcctcccaaaatggga
gaagaggaagcacttcagtctcaggcaagttctggttatgcaagtttattgtcttctccg
cctacagagtctttgcaaaatcagcctatcctgattgctcagcctaatcaaagctataac
ttggctcagccaattaatttttctgtttctctatctaatcagctaagcaacaatgaaaac
aatcagccaatgaaggactctggagttggggacaagcctgcaatgagtccccaaacttca
catgctggtggggaaaacatgccgttacctgtaatgcaagttggatctctgttagttaat
gcacttccaaatactaatctgttaaaacataatttattacaaagtcctggtaattcttct
gatgctgctgctaatcagcctgcaaacttgcttatgaaaactcctcttaacttgactcca
gaagggcaaaagaatgttaatatggaaggccttgctcctgagtttgctagcaagccaggg
tctaactcatctgtttctcctgggacagatcttcccagtggaactgcaagtggcctagtc
ccccctgttaattccatagcacaggctaataattctgcaaaccaatcaagtagcaaagaa
gctgctggagtgttggacttcacagtgtcacagacgttggagaaaagcagcgcaagtaat
tcagtgcaggtgcacagtcagtcaccttctggtgctccagtccaacaggtatccagtggt
gctgctcaggtgcatcccgaggtgcctgacaaacaacatttctatcaacaggtgacaaaa
gatgtgcagcaccaggctgtagcacagggagcgctgccacctcaacctcaaatgcaagca
gcagctcaaatgcagccaccaacatctgggcagtcctcagttcctccagactctcagatt
tccacaggggctaaagccatgcagcagggggacagccaggtgctgggcaaccgtgcccag
cctggggggccccaagaggcaggttcagcccagccaaggtacgaccagacgagtcctggg
aagcagccagcatcagaacagcctccaggtgctccagctgccacagcccctcctgctacc
actgctcaggcagtcccacccaacgggcagcaagacctgcagcgtccaccccctcctcag
acccctcaggaagcctttggtccaccccagaacccttactactactacagacatccttat
gatgcttaccaggccccgtatccaccacattatcctcctgcagaccccaggacagcagct
cacctttattacatggaggacagctatgggcagtacgacccccggtaccgacactacgac
agcagcagtgcctacatggagcctgggagttatcgctaccccgagcctgaacggcccagc
tccagggccagccactgctctgacagaccctcctccaggcaaggatatccagaagattat
tatggaaaaagtggatggagtgattattattcaggctattacccaaactcctatgattat
ggagatccaagtcggtgggagcgatacccatatgaccccaggtacagagacccaagaagt
tatgaccagaggtactggtatgatgctgaacacaacccttaccagaagagagaagcatat
ccgtatggcagcaggaatgaccggtacgatgagaactggagatacgatccccgtttcacc
gggagctttgacgacgactcggagccacaccgggatccctacggggacgactttgaccag
cgcagcgtccacagcgagcactccggccacagcctgcgcagctcccgcagcgtccacagc
caccacagcagcttcagctctcgctcccagcagagccagctctacaggagcaatcatgac
ctaacaggtaatgcctatgaaacccctgcgcaggcagcgtcgctccacgcagattatccc
tatggaggctatgatcccagctttgatggacagcagcctttcccagactatggctaccct
gctgaaacaggctgggcagcagtggagcaagcacctttaaggccctcaacccctgagaaa
ttttcagtgcctcatatctgtgccaggtttgggcctggaggcttcttaataaaagcactg
ccaaacctgccttctgagggtcagccagctctggttgaaatccacagcatggagactatg
ttacaacattctccagagcaagaagagatgagagcctttcctggacctcttgctaaggat
gagacacataaagtggatgttattaattttgcacaaagtaaagctgcacagtgctttaag
aatgaaaatttaattgacaaagaatctgcaagtcttctttgggactttattgtactgttg
tgcaggcagaatgggactgttgtgggaacagacctggctgaacttctgctccgagatcat
aaaacagtgtggcttcctgggaagtcccctaatgaggcaaatttgattgatttcactaat
gaggctttggaacaagcagaagaggaatctggtgaagcccagctctcatttctcactgat
aatcttctaaccacagttgacagttttgagaaggagactgagaggttcagggagttactg
ctttatggccgtaagaaagatgctttggagtctgccatgaagcatggtttgtggggtcat
gctctgcttcttgccagcaaaatggacagcaggacacatgcaagagtgatgaccagattt
gccaacagtctcccaattaatgaccctttgcagactgtttaccagctcatgtctggaaga
atgccagctgcatccacgtgctgtggagatgagaaatggggagactggaggcctcatcta
gcaatggtgttatccaacttgaccaataatgtggacttggaatccaggaccattgctacc
atgggagacactcttgcttctaaaggcctgctggatgctgctcatttttgttaccttatg
gcccaagttgggtttggagtttacacaaggaagacaacaaagcttgtcctaattggatca
aatcacagcttgccatttttaaagtttgccaccaatgaagccattcaaagaacagaagcc
tatgaatatgcacagtcactaggaagtcagcctggctgcttgcccaatttccaggttttc
aagttcatctatgcctgtcggctggctgagatgggccttgctgcccaggctttccactac
tgtgaagtcatttccagaactgtcctcaaagatccacattactattcccctgtgctgatt
ggccagctaatccagatgtcatcccagctgcgcctgtttgaccctcagataaaagaaaag
ccagatcaggaatcttttattgagccctcctggttagtgacacttcgacatgtggatgga
cagatcaaggagggtgcaatagcctataacacagacagatccactccccctccctatgaa
agcagcactcccagctctgaactggaccgtgccagtcagtgtgatgggggaggtggccgt
gacgtgggaccaggtgctgaaaatgccttgctggcatccttgttacccaatatggctcaa
cagatgcagagcgtacagctgatgccttcagtacctcaggctgtccttgatggctcagct
gccatgattcctcctggtgaccagggaagtgtccccttctacccagtggctcctcagcct
cttggcccaggacttggctttgcacctcaaggattttcaaatccctatggaactgaaccg
tccccactatatttagggtcaacactacccccaggagggccaccacaagaagtggaacca
cagccagaagagcagacaaaacttgaaacaggaatgcagagaattgcctcagagtctcct
ccacaaaactccttccctgaacagagagaggatgatttctatggcagaatggctaacatg
ggctatagacaaagatcccgaacaacctcagagtcctctgctcattctgtaggacgagag
agatccaactctgcagcaaaacaaccctctcctcctccctctgctcctgcagggaaggac
actaaaaaggaaacaaaaaaggaggcagcacctagaaagagtggtgcaacctggtttcgt
tggctgatgggaaaaggaaagaatgaggctcacctgccagatgacaagaacaaatcaatt
gtttgggatgagcagaaacaacgttgggttaatctggatgaacctgaagaagagagtaaa
cctcctccaccacctccaacaggatttcctaaagctgctcaggctgctccccccgggcct
ggaggcccacctggtgcctctgtcaatgtgttctccaggagagcagctgggagcagagcc
cgttatgtggatgtcctgaatccaggaggaaccaaagcaagtggtgctgttcctgcacca
tcagacctgtttgctcccctggcaccaatgcccattcctgccaacgtgtttgttccaaac
tcagttccaggagaatcccagcccatggaagggagtggagcagcagagcaaacaccagct
gcaaaccaaaccagcacagaccctgctgcagctgtggaaccagagtacttaaactctgca
gctcttcctcctggatctggacttcatgttcctaaccctgatggctcccagtcaggcgag
ctttcgcgctctagttcaatgagttcattatcacgtgaagtaagccagcattttaatcag
cctgccactgttccacccttgggggcaccttcagcaggagcggtaccgttctacaacccc
tctcaatttgcacaatctcctgcagccactggaagttcaagactgggaagaattggacag
aggaagtatccaacattgaagtaa
DBGET
integrated database retrieval system
