Cinclus cinclus (white-throated dipper): 134051959
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Entry
134051959 CDS
T10813
Symbol
ABCA5
Name
(RefSeq) cholesterol transporter ABCA5
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
134051959 (ABCA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccic02000
]
134051959 (ABCA5)
Transporters [BR:
ccic02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
134051959 (ABCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_16
MMR_HSR1
AAA_23
Dynamin_N
ATP-synt_ab
Rad17
Motif
Other DBs
NCBI-GeneID:
134051959
NCBI-ProteinID:
XP_062362079
LinkDB
All DBs
Position
20:complement(10351867..10383638)
Genome browser
AA seq
1648 aa
AA seq
DB search
MAPAAPREAGVWRQTRALLFKNCLIKCRTKKSSVQEVLFPLFFLFWLILMSMMHPHRKYD
EVANTDLGPLDTSVLVNFVIGYTPPTTMAREIMKKVAFDNFEDGLITEEYLSEEELEEAS
FLKPSNFVGVVFKDSMSYQLRFHDSIAMSSIYTESRATCSSLRKSCESVTYWSSGFTALQ
ACIDAAIIQLKTNHSVWEQLDLTRAMVMGEAAVVEIDNFPRAIILIYLVIAFSPFGYYLA
IHIVAEKERKLKEFLKILGLHDTAFWLSWVLLYVSLIFVMSILMAVIATASSLFPQSSAF
VIFLLFFLYGVSSVFFALMLTPLFKKSKHVGIVEFLATLVFGFVGLNIVLLEDFPKSFVW
ILSPLCQCSFLIGVAQVMHLEDYEDGATFANINAGPYPLCISLILLVLDSIFYLLVAVYL
DQVIPGEFGLRRTPFFFMKPSFWSKHRKNYKELYESSVNGSLSFSEIVEPVPSEFQGKEA
IRISCVQKTFRKKGETVEALRNLSFDIYEGQITALLGHSGTGKTTLMNILCGLCPPTDGF
VSVYGHRVSEIDEMLEVRQIAGVCPQSDIHFDILTVEENLSIFAAIKGIPQNDLIQEVQK
VLLDLEMQPIRDNQAKKLSGGQKRRLSVGVAVLGNPKVLLLDEPTAGMDPCSRHIVWNLL
RSRKAKRVTVFSTHFMDEADILADRKAVISQGMLKCLGSSLFLKSKWGIGYRLSMHIDAY
CNTEATTSVIRQHIPAASLLQESGEQLVYSLPLRDMDKFAGLFSDLDTHSHLGVITYGVS
MTTLEDVYLKLEVEAEIDQADYSVFHSQQAQDEMDTKSLDDMEQSLLVLSEAKAPAMSSS
ALWKKQVSTIAKVHFLSLKRENKCVRVMLLLFLIFLVVQILLFFIHHIIKNAVAAIRLSP
DLYLLKPGENYHKYRSRLLLQNSTESDISDIVHSLGSMNILWEMFNDSDYVSVAPHSAAL
NVFALESRQNYVFNIIFNSTMVHSLPVLMNIVSNLLLRSLNVTESIQIWSNPLIQDLPDT
IFRLEIYFEAVLLGIIITGMPPYFAMDNAENHKIKAYTQLKIAGLYPSAYWTGQAVVDLP
LFFFILTLMIGSLFAFHYGVYFYVGKFLAVIFCLIGYVPSVVLFTYVVSFTFKKVQNTKE
FWSFIFSVTALLCTVVTEVSFFLDHYLVTTVLHYVFSIFIPIYPLIGCLICFIKVSWKGK
SESGGHHDPWDRLLVAVLAPYLQCVVWLFLLRCFELKNGGRTVREDPFFRKCFSKAKPWK
FPDVPHEENEDEDVKAERLRVKEILSSPRSEEMPAILVSSLHKEFDERKEFLLGRKIKKV
ATKHVSLCVKKGEILGLLGPNGAGKSTLINMLVGEIEPTSGQVLMGDDSLGLTSEDDSVK
FVGYCPQTNPLWPDITLQEHFEIYGAIKGMSQSDVKEVIKRITSVLDLKDHLQKTTKKLG
MGLKRKLCFALSMLGNPRVTLLDEPSTGMDPKAKQHMWRAIRAAFKNKERAAILTTHYME
EADAVCDRVAILVSGQLRCIGTVQHLKSKFGRGYFLEMKLREAADVQQVEYLQSQILHIF
PNANRQESFASILAYKIPKEDVQSLSHSFSKLEEVKHAFNIEDYSFSQATLEQVFVELAK
EQEEEDSSFGTLNSSLWWERTQEDRVIF
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggcaccagctgctccaagagaagcaggagtgtggaggcaaacccgagctctcttgttc
aagaattgtctcattaagtgtaggactaagaaaagcagcgtccaggaggtgcttttccca
ctgtttttcctgttctggctgatcctgatgagcatgatgcaccctcacaggaaatatgat
gaggtggccaacacagatttgggtcctctggacacctcagtgctggtgaattttgtcatt
ggctacaccccacccacaaccatggctcgggaaatcatgaagaaagtggcttttgataac
tttgaggatggcctcatcactgaggaatatttgagtgaggaggagctggaagaggcaagt
tttctcaaaccctccaactttgtgggggtggtgttcaaggattccatgtcctaccagctg
aggttccacgactccattgccatgtcctccatctatacagaatccagagccacgtgctcc
agcctgcggaagagctgtgagtcagtgacctactggagctcagggttcacagcactgcag
gcctgcattgatgctgccatcatccagctgaaaacaaatcattctgtttgggaacagctg
gatctgaccagagccatggtcatgggagaggctgcagtggtggaaattgataatttccct
cgtgcaatcattttaatttacctggtgattgcgttctccccctttgggtattatttggca
attcacatcgtggcagaaaaggagaggaagctgaaggaattcttgaaaattttgggactc
catgacactgccttctggctgtcctgggtgctgctctacgtgagcctgatttttgtcatg
tccatcctcatggcagtgatcgccacggcctcgtccctcttcccccagagcagtgccttt
gtcatcttcctcctttttttcctctatggagtctcctcagttttctttgccctgatgctg
acacctctgtttaagaagtccaagcacgtggggatagtggagttcctggcaactctggtt
tttggctttgtgggcctcaacattgtcctgctggaggatttccccaaatccttcgtgtgg
atcctcagccctttgtgccagtgcagcttcttgattggtgttgcacaggtcatgcatctg
gaggattatgaggatggagcaacatttgcaaacatcaatgctggtccttaccctctctgt
atctctctgattctcttggtgctggacagcatcttttacctgcttgtagctgtctacctt
gaccaggtgatcccaggggagtttggcctgcgccgcacgccctttttcttcatgaaacct
tcattttggtcaaagcacaggaaaaactacaaggagctctatgagagcagtgtcaatggc
agcttgagcttcagtgagattgtggaacctgtgccttcagaattccagggcaaggaagcc
atcaggatcagctgtgttcagaaaacattcaggaaaaagggggaaaccgtggaggctctc
agaaatttgtcctttgacatctacgaggggcagatcacagcactgctggggcacagtggc
accgggaagacgacgctgatgaacatcctctgcgggctgtgccctcccacagatgggttt
gtctcagtctatgggcacagagtgtctgagattgatgagatgctggaggtgaggcagatc
gcaggggtgtgcccccagtctgacatccactttgacattttaactgtggaggagaacctc
tccatctttgctgccatcaagggcatcccccagaacgatttgatacaagaggtgcagaag
gtgttgctggatttggagatgcagcccatcagggacaatcaagccaaaaaattgagtggg
gggcagaagaggaggctgtcagtgggagttgctgttcttgggaaccccaaggttttgctg
ctggacgagcccacggcagggatggatccctgctcccgccacatcgtgtggaacctgctg
aggagcaggaaagccaaacgtgtgactgtgttcagcacccacttcatggacgaggctgac
atcctggctgatcgtaaagctgtgatttcccaagggatgctcaagtgcctgggctcttct
ctgttcctcaagagcaagtggggcattggatatcgcctgagcatgcacatcgatgcctac
tgcaacacggaggccaccacgtctgtgatcaggcagcacatccctgcagccagcctgctc
caggagagcggcgagcagctcgtctacagcctccccctccgcgacatggacaagtttgca
ggtttgttctctgacctggacacccattcccacctgggggtcatcacctatggtgtgtcc
atgaccacgctggaggacgtgtacctgaagctggaggtggaggcagagattgatcaagca
gattacagcgtgttccactcgcagcaagcgcaggatgagatggataccaaatccctggat
gacatggagcagagcctgctggtgctgtctgaggccaaggcaccagccatgagcagctca
gccctgtggaagaagcaggtttccaccatagccaaagtgcacttcctcagtctgaaacgg
gagaacaaatgtgtcagagttatgttgttgcttttcctcattttccttgtagttcagatt
ttgttgtttttcatacaccacatcatcaaaaatgctgtagctgctatcaggctctcccca
gatctgtacttgctgaagcctggggagaactatcacaagtacaggagtcggctcctgctg
cagaactccacagagtcggatatcagtgacattgtgcactccctggggagcatgaacatc
ctctgggagatgttcaatgacagtgattatgtctcagtggcacctcacagtgcagctctg
aacgtgtttgcccttgagtccaggcagaattatgttttcaacatcatattcaacagcacc
atggtgcattccctgccagttttgatgaatattgtcagcaacctcctcctgcgcagtttg
aacgtgactgagagcatccagatctggagcaaccccttgattcaggatcttccagacaca
attttcaggctggagatctattttgaagccgtgttactggggatcatcatcactggaatg
ccaccctacttcgccatggacaacgcagagaaccacaagatcaaggcttacacccagctg
aagattgcagggctctatccctcagcttactggactggccaggctgtggtggatctgcct
ctgttcttcttcatcctcaccctgatgatcggcagcctcttcgccttccactacggagtt
tatttctacgtgggcaagttcctggctgtgattttttgcctgattggttatgtcccctca
gtcgtgctcttcacctacgtggtctccttcaccttcaaaaaagtccagaacacgaaggaa
ttttggtcatttatattttcagtgacagccttgctctgcacagttgtcactgaagtgtcc
tttttcctggaccattacctggtaaccaccgtcctgcattatgtcttctctatcttcatt
cctatttatccccttattggctgcctgatctgttttataaaggtctcatggaaaggcaag
agtgagagtgggggacaccacgacccctgggaccggctgctggtggcagttctggctccc
tatctgcagtgtgtggtgtggctgttcctgctgcgctgcttcgagctgaagaacggaggg
aggacggtgagagaagatcccttcttcaggaaatgttttagcaaagccaagccctggaag
ttcccagatgtgcctcacgaggagaacgaggacgaggatgtgaaggcagagaggctgcgt
gtcaaagagatcctgagcagccccaggagtgaggagatgccagcaatcctggtcagcagc
ctgcacaaggagtttgatgaaaggaaggaatttcttctggggagaaaaataaagaaagtg
gcaaccaaacatgtttccctctgtgtgaagaaaggagaaatcctgggtttgttggggccc
aatggagctgggaaaagcacattaattaacatgcttgttggagagattgagccaaccagt
gggcaggttctgatgggagatgattccttggggctgaccagtgaggatgactctgtgaaa
ttcgtggggtactgtcctcaaacaaatcctctctggccagatatcacattgcaggaacac
tttgagatttatggtgctatcaaaggcatgagccagtctgatgttaaagaagtcatcaag
cgcatcaccagtgtgctggatctaaaggaccacctgcagaagacgacaaagaagttggga
atggggctgaaacgcaagctctgctttgccctcagcatgctgggcaacccgcgggtcacg
ctgctggacgagccctccaccggcatggatcccaaagccaagcagcacatgtggcgggca
atccgagcagcctttaagaacaaggagagagcagcaatcctcaccacgcactacatggag
gaggcagatgctgtctgtgaccgtgtggccatcctggtgtcaggacagctcaggtgtata
ggtactgtccaacacctgaagagcaagtttggcagagggtacttcttggaaatgaaatta
agggaagcagcagatgtgcagcaggtggagtatctgcagagccagattttgcacatcttc
cccaatgccaaccgccaggaaagttttgcttctatcttggcatataaaattcctaaagaa
gatgtacagtcgctttcacattctttttccaagctggaggaagtaaaacacgccttcaac
atcgaggactacagcttttcccaagcaacactggaacaggtgtttgtggagctggctaaa
gagcaagaggaggaggacagcagctttggcaccctgaacagcagcctgtggtgggagagg
acacaggaggacagagtcattttctga
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