Cinclus cinclus (white-throated dipper): 134051960
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Entry
134051960 CDS
T10813
Symbol
TMC6
Name
(RefSeq) transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccic02000
]
134051960 (TMC6)
03037 Cilium and associated proteins [BR:
ccic03037
]
134051960 (TMC6)
Transporters [BR:
ccic02000
]
Other transporters
Pores ion channels [TC:
1
]
134051960 (TMC6)
Cilium and associated proteins [BR:
ccic03037
]
Other cilia and associated proteins
Stereociliary proteins
134051960 (TMC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
134051960
NCBI-ProteinID:
XP_062362080
LinkDB
All DBs
Position
20:12316375..12323044
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AA seq
799 aa
AA seq
DB search
MSQPPSITLHVPEGAESDGQELSPDNERALHTSFHQLILEQSSLIEAGLELELQERSRES
PACSATRDACVVAWPEPGQGEEHPSYSSATLQILASMPSRTIGRSLGAIISQYCNRTARL
RRRSSRPPLQQLCRTARPSLRQYNLDTDPASATLEEKRNLLVKELLSLSPSQCSHMLLTM
PLSLAEKRILRRQLSGQRGPLGQRAHHWAPFSPCGWPKFCVVLGCRGLWYRLLSLLRTAQ
PWHYALKQIGGRFGSSVLSYFLFLKTLLMLNFFSFFILLAFVVVVQAVYPSASVSPQPFT
GLELLTGAGYFTHSLLYYGYYSNVTLNDPCTSRPKGSVCPLAAPSLPYNLPLAYLFSVGV
SFLVTCILLVYSVSRSFRGSVGSSTGDLAIKVFCAWDFKVMQRRSVKLQCENICTQLKEL
LVEQRSRSRSQSRCQCLGHCLVMLLAWVLALGLVSGCMLAVHYFSKHMHTVQQEQQVQGS
GRWQQEAILLVLPLVVSLLNALISHLYNLLAMWEKQDSPVTQVYVAIIRNLILKTMVLIL
LCYQWLSRSVICSTEECWETCVGQDLYRFMVMDFIFTLLDTLFGELIWRLILEKRLKTKQ
RPEFDIARNVLELIYGQTLTWLGILFAPLLPAVQMLKLLLLFYIKKTSLMRNCQSPSKPW
QASRMSTMFITLLCFPSFLGAAAFLSYTIWSVQPSETCGPFRGLETIYKSGKRWVLVLEK
SNPNITWFAWLYQHVLENTCLQFFMSVALIAVIYFNIQVVRGRRKVVCLLQEQIANEGED
KVFLIQKLHSVYEQRHRRS
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagccgccctccatcaccctccacgtccccgagggcgccgagagcgatggccag
gagctcagtccggacaatgagagagccctgcacacctcattccaccaactcatcctggag
cagagcagcttgatcgaggcaggtctggagctggagttgcaggagaggagcagagagtcc
ccagcctgctcggctactcgagatgcctgtgtggtggcctggccagagcctgggcaaggt
gaggagcaccccagctactcctctgccaccctgcagatcttagccagcatgcccagccgc
accatcggacgcagccttggggccatcatctcccagtactgcaaccgcacggcccggctg
cggcgccgcagcagccgcccaccgctgcagcagctctgccgcacggcacggcccagcctg
cgccagtacaacctggacactgaccctgccagtgccacgctggaagagaagcgaaacctg
ctggtgaaggagctgctgagcctctcacccagccagtgcagccacatgctgctcaccatg
cccctcagcctggcggagaaacgcatcctcaggcggcagctgagtgggcagaggggccca
ctggggcagcgtgcccatcactgggcccccttctcaccctgtggttggcccaagttctgc
gtcgtccttggctgccgaggtctctggtacaggctcctgtctctgctccgcactgcacag
ccctggcactatgccctgaagcagattggtggccgctttggctccagtgtcctctcctac
ttcctcttcctcaagacactccttatgttgaacttcttttcattcttcatcctcctggcc
ttcgtggtggtcgtgcaggctgtgtacccctctgcatcagtcagcccccagcccttcact
ggcctcgaactcctcacaggagcgggctacttcacacactcactgctgtactacggctac
tacagcaacgtgaccctaaatgacccctgcacctccagacctaagggcagcgtgtgcccc
cttgcagccccttccctcccatacaacttgcctctggcctacctgttcagtgttggggtc
tccttccttgtcacctgcatcctgctggtgtacagtgtgtctcgctcttttcgggggagc
gtgggaagctccacaggggacttggccatcaaagtcttctgtgcctgggacttcaaggtg
atgcagaggcgctcggtgaagctgcagtgcgagaacatctgcacccagttgaaggagctg
ctggtggagcagcgctctcgctcccgctcccagagccgctgccagtgcctggggcactgc
ctggtgatgctgctggcctgggtcctggcactgggcttggtgtcgggctgcatgctggct
gtgcactacttctccaagcacatgcacacagttcagcaggagcaacaagtgcagggcagt
ggcagatggcagcaagaagccattctgctggtcctgccccttgtggtgtccctcctcaat
gccttgatatcccacctgtacaacctgctggccatgtgggagaagcaggactccccagtg
acacaggtttacgtggcaatcatcaggaacctcatcctgaagacaatggttctcatcttg
ctgtgctaccagtggctcagccggagtgttatctgctcaacagaggagtgctgggagaca
tgtgtgggacaggacctgtatcgcttcatggtgatggatttcatattcaccttgctggat
acgctctttggggagctgatctggaggctaatcctagagaagaggctgaagacgaagcag
aggccagagtttgatattgcccgaaatgtgctggagctgatctatgggcagaccctgacc
tggctgggcattctcttcgctccactcctgccagctgtgcagatgctgaagctgctgctg
ctgttctatatcaaaaagaccagcctgatgcggaactgccagtcccccagcaagccctgg
caagcatcacgcatgagcaccatgttcatcactctgctgtgcttcccctccttcctgggt
gcagctgccttcctctcctacaccatctggtcggtgcagccctcagaaacctgcggtccc
ttccgtgggctcgaaaccatctacaagtcagggaagaggtgggtgctagtgctggagaag
tccaaccccaacatcacctggtttgcctggctctaccagcatgtcttggagaacacctgc
ctccagttcttcatgtctgtggccctgatagctgtgatctacttcaacatccaggtggtt
agaggccgccggaaggtcgtctgcctgctgcaggagcagattgccaatgaaggggaagat
aaggtatttctcatccagaagcttcactccgtttatgagcagagacacagacgttcctga
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