Cinclus cinclus (white-throated dipper): 134051970
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Entry
134051970 CDS
T10813
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
134051970 (HELZ)
3'-5' decay
Other 3'-5' decay factors
134051970 (HELZ)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134051970
NCBI-ProteinID:
XP_062362092
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Position
20:9404601..9488843
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AA seq
1943 aa
AA seq
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MADRRPEKACEQACESLKQQDYEVAVKHCTEALLSLSQYPPAHLPEPCQAELDRIKIETL
LYRIASFLQLKKYGQADEDCRHVLGEGLAKGDGSLRAVLCCMHLKGKLQIVSNVLSKSLM
GESLNGMVTKDLTRLKTLLAETEAAGKVPSGYHVEDLEEGSRDGWHFRPPPRGVTSSEEY
TLCKRFLEQGICRYGAQCTSAHSQEELTEWQKRYASRLIRLKQQKENKQCSGSYMETLIE
KWMNSLSPEKVLSECVEGVRVEHNPELSVTVTTKKSHQTWTFALTCKPARMLYRVALLYD
AHRPHFSIVAISAGDSTTQVSQEVPENCQEWIGGKMVQNGIDHYIYKVSIAFNTEIFGTF
RQTVVFDFGLEPVLMQRVMIDAASTEDLEYLMHARQQLLTTAKRWDSTSKTIVEFEPNET
TELEKSLLTRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNIK
VQLQIVASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVTK
EKSAQTQGTKEKVYEAAIEEKTKDYIFLRVSRECCEELNLRADCEMQVELQFQLNRLPLC
EMHYALDRIKDNSILFPDVSMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQL
PPVLIIGPYGTGKTFTLAQAVKHILQQQDTSRILICTHSNSAADLYIKDYLHPYVEAGNP
QARPLRVYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILKQRVVVVTLNTSQYLCQ
LDLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFVYSEFARERNL
HVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPL
TFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQV
FRIRAELRKKRLSDVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEQLLEDST
EDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENESLHGI
TFEQIKAQLEALELKKTYVLNPLAPEFIPRALRHQHSANATKQQQSPPKGKVHHHNQNDH
FPPDGIVQPNPSVLIGNPIRAYTPPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVY
GGNMVMSVPLPVPWTGYQGRFAVDPRLITHQAAMAYNMNLLQAHGRGSPIPYGLGHPSPV
SIGQQQLPHQDKEQHEQTRNGKSENTAGPEISKIRTPEKKPLESKQVDLEANPQQRSPES
RSNVGYPSAKFHRKDNPNPRQLNLHLTPPHSQFAVPSRHFQHLSQIPRQPYPLQQQQQQN
LLSQQQNHLPEQPNQMPPQQSQVVQQHNHLNQQPPPPSQLSPAFQAGPSQSFFNNPIPHR
PHSPAVDAVISEQHPPPLLQEVNNPLRPIAQHNPVLPTHLNNFIEENPSGMPLGDTLDRM
HGNVALETIRQQQQARLQQWNEHNAYLSQGTIPYQHHHHPHLPHLPQQPIGLHQQQQVRA
NWKLASNTEDETEATYSRFQDLLRELSHRDPSESRDVAEMPPPQSRLLQYRQVQPRSPPA
LPSPSCNSNHSAHFPNFTENSRDIELPTNPAFQQHLPQMYNPPFSMPSEHITPSPLKYLQ
PDGSWTYANLQQNHLLGQGFHYGIPPLAHRSQQSPFIQIQNHQHAVGQEPFHPLASRAVS
ASSLHSLEEYEPRGPGRPLYQRRISSSSVQACSEELSTPQDSLGQCKELQDHSNQSSFNY
SSPELWVNSSSSAPYPNIPCNGASRAVPPRELLAPPKAAKPPEEHLKADNIQLSNSFNYN
VLQHLGQFPPLMPNKQLVESNSSSPQPAGATKPVMSYASALRAPPKPKPPPEQTKKNSDP
LSLFQELSLGSSSGSNGFYSYFK
NT seq
5832 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagaagaccagagaaggcatgtgaacaagcatgtgaatcccttaagcagcag
gattatgaagtggcagtgaagcattgcacagaggctctcctttccctcagccagtacccc
ccagctcacctcccggagccctgccaggcagaactcgaccgcatcaaaatcgagactctt
ctgtatagaattgcttcctttttacaacttaaaaagtatgggcaagcagatgaagactgt
aggcatgtgctgggagaggggctggccaagggcgatggatctctccgggcagtgctctgc
tgcatgcatctcaaagggaagctgcaaattgtgtctaatgttctttccaaatcactgatg
ggggaatcactgaacgggatggtaactaaagatctcacacgactgaaaacacttcttgct
gaaacagaggcagctggtaaagtaccatcaggatatcatgtagaagatttagaagaaggg
tcgcgggatggttggcacttccgcccccctcccaggggtgtcacgagcagtgaggaatac
acactctgtaaaagatttttagagcaagggatctgcaggtatggtgcccagtgtacttca
gcacattcccaggaagagctgacagaatggcagaaacgatacgcttcccgcttgatccga
ctgaagcagcagaaggaaaacaaacagtgctcaggcagttacatggaaaccctgattgag
aaatggatgaattccttatctcctgagaaagtccttagtgaatgtgtagaaggagtgaga
gtagaacataatcctgagctctcagtaactgtcaccaccaaaaagtcacaccagacatgg
acgtttgctctcacatgtaagcctgcgagaatgctgtatcgtgtggcattgctttatgat
gcccatcgaccacacttcagtatcgttgcaatatctgctggagacagcactacccaggtg
tcacaagaagttccagaaaactgtcaggaatggataggaggaaagatggtccagaatgga
atagatcactatatatacaaagtcagtatagcctttaacacagaaatctttgggactttt
cgccaaactgtggtgtttgactttggattagaaccagtcctcatgcaacgagtgatgatt
gatgctgcttcaactgaagaccttgaatacctgatgcatgcacggcaacagctcctgacc
acagccaagcgttgggattccacatctaagactattgttgagtttgagcctaatgaaact
actgaactggagaagagccttctcaccagataccaaatccctctgtctgctgaccagcta
ttcacacaatctgtcctggacaaatcactgaccaagaccaactatcagtcaaggctccac
gacctcctttatattgaggaaatagcgcagtataaggaagttagcaagttcaacataaaa
gtacaattgcagattgtagcaagcttcatgctcactggtgtttctggaggtgcaaaatat
gcccagaatggacaactttttggccgctttaagctcactgagacgctttctgaagacact
ttggctggacggctggtgatgaccaaagtcaatgctgtttatttattgcctgtcactaaa
gaaaagtcagcacagacccaaggaaccaaagagaaggtttatgaagcagctatcgaggag
aagacaaaggattatatcttcttgagggtgtccagggaatgctgtgaggagctgaatctt
cgggcagattgtgaaatgcaggttgaacttcagttccagctgaatcgcttacccctctgt
gaaatgcattatgccttggacaggattaaggacaacagcattttgtttccagatgtcagc
atgactcccaccataccctggagtcccaacagacaatgggatgagcagttggaccctcgg
ctgaacgcgaagcagaaagaggctgttctggctatcaccaccccactctccatacaactg
cctcctgttcttatcatcggtccctatgggacaggaaaaaccttcactctggctcaggca
gtcaagcacatcctccagcagcaggacaccagcaggattctcatttgcacccattctaat
agtgctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaatccc
caggcaagacctctcagggtatatttccgaaatcgctgggtaaagactgttcacccagtt
gtgcatcagtactgtttgatttcaagcacacattccaccttccagatgccacaaaaagaa
gacattcttaagcaacgagtagtagttgttactttaaatacatcacagtatctgtgtcag
ctggatcttgaaccagggttttttacacacattctgttagatgaagctgctcaagctatg
gagtgtgaaacgattatgcctctagcattagctaataaaaacacaagaattgtcttggct
ggagaccatatgcagctcagtccttttgtctacagtgaatttgccagggagagaaacctt
catgtttccttgctcgaccggctctacgagcactaccctgcagaattcccgtgcaggatc
ctgctgtgtgagaactatcgctcccatgaagcaatcatcaattacacatctgaacttttc
tatgaaggcaaattgatggcaagtggaaagcagcctgcacacaaagatttctaccctttg
actttcttcacagcacgtggagaagatgtgcaagaaaaaaatagtacagctttttacaat
aatgcagaggtgtttgaagtggtggagcgggtggaggagctgaggaggaagtggcccgtg
gcctggggcaagctggacgatggcagcatcggggtggtgaccccctacgctgaccaggtg
ttccgcatccgcgccgagctgcgcaagaagcgcctgtccgacgtcagcgtggagagggtg
ctcaacgtgcagggaaaacagttcagagttttgttcctcagcacagtacgaacacggcac
acgtgcaaacataagcaaactccaattaaaaggaaagagcagttactggaggattcaaca
gaagacttggattatggttttctgtctaattacaaacttctcaacactgccattacaaga
gcacagtccttggtagctgtggtgggagatcctattgctttatgttccattggaagatgc
aggaaattctgggaaaggtttattgctctgtgccacgagaacgaaagtcttcatggcatc
acgtttgagcagatcaaagctcagctggaagctctggagttaaagaaaacctacgtgttg
aaccctctggcccccgagttcatcccccgagctctgcggcaccagcactcggccaatgcc
accaaacagcagcagtcacctccaaagggcaaggtccatcatcataaccagaatgatcat
ttcccacctgatggaattgttcagcccaatccttctgttctaattggaaatcctatccga
gcatatactcctccccctcctcctctgggacctcatcccaatctggggaaatctccgagt
cctgttcaaaggatagatccacacactgggacaagtattctatatgtacctgctgtctat
ggaggaaatatggtcatgtctgtgcctttgcctgtaccgtggacagggtatcagggtagg
tttgcagtcgaccctcgactcattactcaccaagcagccatggcatataacatgaacctg
ttacaggcacatgggcgagggtctccgatcccgtatggcctgggccacccctcccctgtt
agcataggacagcagcagctcccacaccaggacaaggagcagcacgagcaaactcggaat
ggtaaaagtgaaaacactgctggacccgaaatcagtaaaattcgaacacctgagaagaaa
cctctggaatccaagcaggtcgatttagaagcaaaccctcagcagagaagcccagagtcc
cgttccaatgttggttaccccagtgctaaattccatcgcaaagacaaccccaaccccagg
cagctgaacctgcacctgaccccgccccactcccagttcgcagttcccagccgccacttc
cagcacctgtcccagatcccgaggcagccctaccctctgcagcagcagcagcagcaaaac
ctcttaagtcaacagcaaaatcacttgcctgaacaacccaaccaaatgccaccccagcag
agccaggtagttcagcagcataatcacttgaatcagcagcctccaccaccttcgcagctt
tcccctgctttccaggcaggccccagccagtccttttttaataatcccattccccaccga
ccacattctcctgctgtagatgctgtgatttcagaacaacaccccccacctctgttacaa
gaagtcaataatcctttgaggcctattgcacagcacaacccagttctgccaacccacttg
aacaacttcattgaagagaatccatcaggaatgcccttaggggacactttagatcgtatg
catggaaatgtagctttggaaacaataaggcagcaacaacaagccaggttacagcaatgg
aatgaacataatgcctatctcagtcaaggcactattccatatcaacaccatcaccatcct
catctaccacatcttcctcagcaaccaattggattacatcaacagcagcaagttagggca
aactggaaacttgccagtaatacagaagatgaaacagaggcaacatattcaaggttccag
gacttgctgcgggagctgtcccaccgcgatccgagcgagagccgggacgtggctgagatg
cccccgccccagtccagactgttgcaatacagacaagtccagccccggagcccaccagca
ctcccttctccttcctgcaactccaaccacagcgcccacttccccaacttcactgagaac
agcagagacattgaactgcccactaacccagcatttcagcagcatttaccccaaatgtac
aacccccctttctcaatgccatccgaacacataaccccgtctcccttgaaatacctgcaa
cctgatgggtcctggacttatgctaacctacagcagaatcacctcctggggcagggcttt
cactatggaatacctccactggcccacaggtcacagcaaagcccttttatacaaatccag
aatcatcagcacgcagttggtcaggagccatttcatccactcgcatctcgagcagtttct
gcttcttcgctccacagcttagaagagtatgaaccaagaggaccaggcaggccgttgtac
caaagaagaatttcctctagttcagtccaggcttgttctgaagaattaagcactcctcaa
gacagtcttggtcagtgtaaagagcttcaggaccacagtaaccagtcatcgttcaactac
tcctccccagagctgtgggtgaactcctcctcctctgccccctacccaaacattccatgc
aatggagccagcagagctgttccaccccgggagctgctagctccgccgaaggctgccaag
cccccggaggaacacctgaaggccgacaacatccagctctccaactccttcaactacaac
gtgctccagcatctgggccagttcccccctctgatgcccaacaagcagctggtggagtcc
aacagcagcagtccccagcccgcgggcgccaccaaacccgtcatgtcctacgccagcgct
ctgcgggctccccccaagcccaaacctcctcctgagcagacaaaaaagaacagcgacccc
ctgtccttgtttcaggaacttagcctaggtagttcatcaggtagcaatggcttttactcc
tattttaaataa
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