Cinclus cinclus (white-throated dipper): 134052010
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Entry
134052010 CDS
T10813
Symbol
TRIM25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04622
RIG-I-like receptor signaling pathway
ccic05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
134052010 (TRIM25)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
134052010 (TRIM25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccic04121
]
134052010 (TRIM25)
Enzymes [BR:
ccic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134052010 (TRIM25)
Ubiquitin system [BR:
ccic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134052010 (TRIM25)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
TRIM_CC
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
ANCHR-like_BBOX
zf-RING_5
zf-B_box
TBCA_PH
Fib_alpha
Photo_RC
YqfB
Motif
Other DBs
NCBI-GeneID:
134052010
NCBI-ProteinID:
XP_062362174
LinkDB
All DBs
Position
20
Genome browser
AA seq
633 aa
AA seq
DB search
MAALESEPGLSGLEEELTCSICLCLFSSPVTVPCGHNFCASCLDLSWAGLSGGFSCPQCR
ATFAGRPQLQKNTVLCRVVEQLQGRPGAKGEEQEEENGVGEAGGCWAQEPPVSCDSCQEA
PAVQTCLTCTASFCTEHLRPHRDSPAFRDHQLCPPLRDLQQRKCPQHNRLFEFFCGKHGA
CICSLCLLGHKLCPTTPLEQAKAAAQSVLKKKLGELHNQSEKTARAMSTVKTNQNQSAET
ASRKKELIRNEFSEIKAIIEERENEIMKAITEEEKRVWNKFDYIYSVLGNKKNEIQSLKD
QIEMALTESDDVLFLKRAAALQKTSTKEAFVPVVEMDQNVMHSTYQAAIVLKDIVKTSVI
QSREKKEEVAAKLVKIKGPPAAHPNKLPVGKKPHGPHQIHKEKSIPPSQTSSHGETDTKE
KKKAAKVAPATTPAAAASAKDLMDSFLKKPREELLQYAANITLDYNTAHNTVVLSENYTR
MSISDTFTGHKHHPQRFTDYRQVLGFQCFKRGIHYWEVQLQQSSFCGVGVCYGSMERQGP
ESRLGRNSKSWCIEWLNSKISSWHNDVEKCLPNTKATKIGVLLNCEGGFVIFTAVGEKNY
LIYKFKAQFTEALYPAFWLFSSDAVLSLCHMKE
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggagtcggagccggggctgtcggggctggaagaggagctcacctgctcc
atctgcctctgcctcttcagcagccccgtgacggtgccctgcgggcacaacttctgcgcc
tcctgcctggatctcagctgggccggcctctcggggggcttcagctgcccgcagtgccgg
gccaccttcgcgggccgcccgcagctgcagaagaacacggtgctgtgccgggtggtggag
cagctccagggccgccctggggccaagggcgaggaacaggaggaggagaacggggttggg
gaggcgggggggtgctgggcgcaggagccccccgtgtcctgcgacagctgccaggaggct
ccggccgtacagacctgcctgacctgcaccgcgtccttctgcaccgagcacctgcggccg
caccgcgacagccccgccttccgcgaccaccagctctgcccgcccctgcgcgacctgcag
cagcgcaagtgcccccagcacaacaggctcttcgagttcttctgcggcaagcacggtgcc
tgcatctgctccctctgcctgctcgggcacaaactgtgccccaccacccccttggagcag
gcaaaagctgctgcccagtcggtgctgaagaaaaaactcggggagctgcataaccagagt
gaaaaaactgcccgggccatgagcacggtgaaaacaaaccagaaccaatctgctgaaaca
gcttcgagaaagaaggaattgatcagaaatgagttttcagaaataaaagctataattgaa
gaaagagaaaatgagatcatgaaagcaattacagaggaagaaaagagagtttggaataag
tttgattatatttacagtgttctgggaaataagaagaatgaaattcagtctctcaaagat
cagattgagatggcactgactgaaagtgatgacgttctgtttttgaagagagcagcagca
ctgcaaaaaacatcaacaaaagaggctttcgttcctgtagttgaaatggaccaaaatgtg
atgcattccacttaccaggctgccattgtcctcaaagacatagtgaaaacttcagtaatt
cagagtagggagaaaaaagaggaagttgcagccaaacttgtgaaaattaagggccctcca
gcagctcatccaaacaaactccctgttggaaaaaagccccatggaccacaccagatccac
aaagagaaaagcattcccccatctcagaccagttcacatggggagacagataccaaagag
aaaaagaaagctgctaaagttgcaccagccaccacacctgctgctgctgcttctgctaaa
gatctcatggacagcttcctgaagaagcccagagaggagctcttgcagtatgctgccaac
atcacactggattacaacacagctcacaacaccgtggttctgtcagagaactacaccagg
atgtccatctcagacaccttcacgggtcacaagcaccacccccagcgcttcaccgattac
cgccaggtgctgggcttccagtgcttcaagagaggcatccactactgggaggtgcagctg
cagcagagcagcttctgcggggtcggggtgtgctacggcagcatggagcgccagggcccc
gagagccgcctgggcaggaacagcaagtcctggtgcatcgagtggctcaactccaaaata
tcatcctggcacaacgacgtggaaaagtgcctgcccaacaccaaggctaccaagattggg
gtgctgctcaactgcgaggggggctttgtgattttcacagcagtgggggagaagaattac
ttgatctacaagttcaaagcccagttcactgaagccttgtacccggccttctggctgttt
tccagtgatgctgttctctctctctgtcacatgaaagagtaa
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