Cinclus cinclus (white-throated dipper): 134052015
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Entry
134052015 CDS
T10813
Symbol
CPSF4L
Name
(RefSeq) putative cleavage and polyadenylation specificity factor subunit 4-like protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03015
mRNA surveillance pathway
ccic05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134052015 (CPSF4L)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
134052015 (CPSF4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccic03021
]
134052015 (CPSF4L)
03019 Messenger RNA biogenesis [BR:
ccic03019
]
134052015 (CPSF4L)
Transcription machinery [BR:
ccic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
134052015 (CPSF4L)
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
134052015 (CPSF4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_12
Torus
zf-CCCH_2
zf-CCCH_4
zf-CCCH_RBM22
Nab2-like_zf-CCCH_
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
134052015
NCBI-ProteinID:
XP_062362180
LinkDB
All DBs
Position
20:complement(11429035..11431476)
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AA seq
246 aa
AA seq
DB search
MMQELVAGVEKIRFDSEADLKELGARSLPFLGVDSVQGHPRHGGAKPAVCKHWLRGLCKR
GDGCDFLHDYDATRMPECYFYSKFGECSNKDCPFVHVDATSSTLCCPWYDRGFCRHGPLC
KYKHTRRVMCANYLVGFCPEGPKCKFVHLKAGLMSSSTDPSKEAGCPWGLVQWDLAAAEE
RGGEAVPPKGPPPSGTQHLADRLWDNSGCPPSPQNLLKGSTCSKSRSVSPCASESGRTAL
EMLLGK
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaggagctggtggctggtgtggagaagatcaggtttgactcggaggctgatttg
aaggagcttggagctcggtccctgcccttcctgggggtggacagtgtgcagggccacccc
cggcacggcggggccaagcccgctgtgtgcaagcattggctgcgagggctctgcaagcgg
ggcgacggctgcgacttcctgcacgactatgatgccaccaggatgcccgagtgctatttc
tactccaagttcggtgagtgcagcaacaaggactgtcccttcgtgcacgtcgatgccacc
agcagcaccctgtgctgtccctggtacgaccgtggattctgcaggcacggtcccctgtgc
aagtacaagcacacgaggagggtgatgtgtgccaactacctggtgggcttctgcccggag
ggacccaagtgcaaatttgtgcacctcaaggccgggcttatgagcagcagcacagaccca
tccaaggaagctgggtgtccgtgggggctggtacagtgggatctggctgctgcagaggag
aggggaggtgaggctgtgccacccaaggggccacctccttctggcacccagcacctggca
gatcgtctgtgggacaacagtggctgccccccgagcccacagaacctgctgaaaggaagt
acctgctccaagagcagatcagtcagtccctgtgccagtgagagcgggaggaccgcgctg
gaaatgctgctgggaaaatga
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integrated database retrieval system
