Cinclus cinclus (white-throated dipper): 134052066
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Entry
134052066 CDS
T10813
Symbol
RHBDL3
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccic01002
]
134052066 (RHBDL3)
Enzymes [BR:
ccic01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
134052066 (RHBDL3)
Peptidases and inhibitors [BR:
ccic01002
]
Serine peptidases
Family S54: Rhomboid family
134052066 (RHBDL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_1
EF-hand_6
DUF5580_M
EF-hand_11
EF-hand_8
AIF-1
EF-hand_9
Motif
Other DBs
NCBI-GeneID:
134052066
NCBI-ProteinID:
XP_062362256
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Position
20:8872397..8927245
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AA seq
435 aa
AA seq
DB search
MGDRLPEPHASSSPAVAASSEAEEIEVLDSEDVLPMAAEDHWKALFDQKSSCSCRQALKQ
EESSWDGAEVRKQAEIFDPDNTGYISTEKFRSLLQRHGSELDPHKLEVLLALADSNSEGR
ICYQDFVNLMSNKRSNSFRQAILQGNRRLCSKALLEETGLSLSQRLIRHVAYETLPREID
RKWYYDSYTCCPPPWFMITITLVEVAFFLYNGVVLDRFVLQVSHPLYLKNALLYHPQLRA
QAWRYLTYIFMHAGIEHLGLNVVLQLLVGVPLEMVHGAARISFVYVAGVVAGSLAVSVAD
MRAPVVGSSGGVYALVSAHLANIVMNWSGMKCQFKLLRMAVALICMSFEFGRAVWLRFHP
SAYPPCPHPSFMAHLGGVMVGITLGVIILRNYEQRLQDQTLWWIFLSIYVIFVLFAIFWN
IFAYSLLDLKLPPPP
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaggctgccggagcctcacgccagctcttcccctgctgtggctgccagctcg
gaggcggaagaaatcgaggtgctggactccgaggatgtcctacctatggccgcagaggat
cactggaaagccctatttgatcagaaaagtagctgttcctgcaggcaggcactaaagcaa
gaggaaagcagctgggatggagcagaagtcaggaagcaggctgaaatttttgatcctgac
aacactggctacatcagcacggagaagtttcgctcccttctccagagacacggctcggag
ctggacccccacaagctggaggtcctgctagccctggcagacagcaactctgaggggagg
atctgctaccaggacttcgtcaacctgatgagcaacaaaaggtccaacagtttccgccaa
gccatcctgcaggggaacaggaggctgtgcagcaaggccctgctggaggagacggggctg
agcttgtctcagaggctgatccggcacgtggcctacgagaccctcccgcgggagatcgac
cgcaagtggtactacgacagctacacctgctgccccccaccctggttcatgatcaccatc
actcttgtagaggttgccttttttctttataatggagtggtcttagacagatttgtgctg
caagtcagccaccccttgtacctgaagaatgcattactgtaccatccccagcttcgggcc
caggcttggaggtacctaacctacatattcatgcatgcagggatagaacaccttgggctc
aatgttgtccttcagctcttggttggggttcctctggaaatggtgcacggagctgcgagg
atcagttttgtgtacgttgcaggagttgtggcagggtccctggcagtgtcagtggctgac
atgagggcgccggtggtgggatcctctggaggtgtgtatgctcttgtctctgctcacctg
gccaatattgtgatgaattggtcaggaatgaagtgccaattcaaactgctgcgcatggct
gttgccttgatctgtatgagctttgaatttggaagagccgtgtggctgcgtttccacccc
tccgcttaccccccatgcccccaccccagcttcatggctcacctgggaggggtgatggtt
ggaatcacccttggtgtcatcatcctgaggaactatgagcagagactccaagatcagact
ttatggtggatcttcctttctatttatgtcatttttgtcttgtttgccatcttctggaac
atttttgcctacagtctgttggatctaaagctacctccccctccttga
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