Cinclus cinclus (white-throated dipper): 134052080
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Entry
134052080 CDS
T10813
Symbol
NTN1
Name
(RefSeq) netrin-1
KO
K06843
netrin 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134052080 (NTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ccic00536
]
134052080 (NTN1)
Glycosaminoglycan binding proteins [BR:
ccic00536
]
Heparan sulfate / Heparin
Axon guidance molecules
134052080 (NTN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
Motif
Other DBs
NCBI-GeneID:
134052080
NCBI-ProteinID:
XP_062362286
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Position
20
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AA seq
606 aa
AA seq
DB search
MPRRGAEAPLALLLAAAWLAQPLRGGYHGVSMFAVQTAQPDPCYDEHGLPRRCIPDFVNS
AFGKEVKVSSTCGKPPSRYCVVTEKGEEQVRTCHLCNASDPKRAHPPSFLTDLNNPHNLT
CWQSDSYVQYPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIHKSMDYGKTWVPFQFYS
TQCRKMYNKPSRAAITKQNEQEAVCTDSHTDVRPLSGGLIAFSTLDGRPTAHDFDNSPVL
QDWVTATDIRVTFSRLHTFGDESEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCVRDR
DDSLVCDCKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELFK
LSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKPISHRKACKECDCHPVGAAGQTCNQ
TTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPAAPPTTAASSSEEPADCDSYCKA
SKGKLKINMKKYCKKDYAVQIHILKAEKNADWWKFTVNIISVYKQGSNRIRRGDQTLWIH
SKDIACKCPKIKPMKKYLLLGNNEDSPDQSGIIADKTSLVIQWRDTWARRLRKFQQREKK
GKCKKA
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggaggggagcggaggcgccgctggccctgctgctggcggcggcgtggctggcg
cagcccctgcgcggcggctaccacggcgtgagcatgttcgccgtgcagaccgcccagcca
gacccctgctacgacgagcacgggctgccccgccgctgcatccccgacttcgttaactcg
gccttcgggaaggaggtgaaggtgtccagcacctgcgggaaaccgccgtcgcggtactgc
gtggtgacggagaaaggcgaggagcaggtccgcacctgccacctctgcaacgcctccgac
cccaagcgcgcccacccgccctccttcctcaccgacctcaacaacccgcacaacctgacc
tgctggcagtccgacagctacgtccagtatccccacaacgtcaccctcaccctctccctc
ggcaagaaattcgaggtgacctacgtcagcctgcagttctgctcgccgcgccccgagtcc
atggccatccacaagtccatggactacggcaagacctgggtgcctttccagttctactcc
acgcagtgccgcaagatgtacaacaagccgagccgcgccgccatcacgaagcagaacgag
caggaggcggtgtgcaccgactcgcacaccgacgtgcggcccctctccggcggcctcatc
gccttcagcaccctggacggccgccccaccgcccacgacttcgacaactcgcccgtgctg
caggactgggtgacggccaccgacatcagggtgaccttcagccgcctgcacaccttcggc
gacgagagcgaggacgactccgagctggcccgcgactcctacttctacgccgtgtccgac
ttgcaggtcggcgggcgctgcaagtgcaacgggcacgcgtcccgctgcgtccgggaccgc
gacgacagcttggtgtgcgactgcaagcacaacacggccggccccgagtgcgaccgctgc
aagcccttccactacgaccggccctggcagcgagcgacggcccgggaggccaacgagtgt
gtggcctgcaactgcaacctgcacgcgcggcgctgccgcttcaacatggagctgttcaag
ctgtcggggcgcaagagcggcggcgtgtgcctcaactgcaggcacaacacggcgggcagg
cactgccactactgcaaggagggcttctaccgtgacctcagcaagcccatctcccaccgc
aaggcctgcaaagagtgcgattgtcaccccgtgggtgccgccggccagacctgcaaccag
accacgggccagtgtccctgcaaggacggtgtcaccggcatcacctgcaaccgctgcgcc
aagggctaccagcagagccgctcccccatcgccccttgcataaagattcctgctgctcca
cccaccacggccgccagcagctcagaggagcccgcagattgcgactcgtactgcaaagcc
tccaaggggaaactgaagatcaacatgaagaagtactgtaagaaagactatgctgtccag
atccatatcctgaaagcagaaaaaaatgcagactggtggaagttcacagtgaacatcatc
tccgtctacaaacaaggcagcaaccggatccggcgtggagatcagaccctgtggatccac
tccaaggacatagcctgcaagtgccccaaaatcaagcccatgaagaagtatttgctgctg
ggtaacaacgaggactctcctgaccagagcggcatcattgcagacaaaaccagcctggtg
atccagtggcgggacacgtgggcccggcggctgcggaagttccagcagcgggagaagaag
gggaagtgtaagaaagcctaa
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