Cinclus cinclus (white-throated dipper): 134052094
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Entry
134052094 CDS
T10813
Symbol
EME1
Name
(RefSeq) crossover junction endonuclease EME1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03440
Homologous recombination
ccic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
134052094 (EME1)
03460 Fanconi anemia pathway
134052094 (EME1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccic03400
]
134052094 (EME1)
DNA repair and recombination proteins [BR:
ccic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
134052094 (EME1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EME1-MUS81_C
ERCC4
DUF5568
DUF6033
Motif
Other DBs
NCBI-GeneID:
134052094
NCBI-ProteinID:
XP_062362306
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All DBs
Position
20:6516784..6521285
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AA seq
543 aa
AA seq
DB search
MAGIESGSESSEEDSLPSFAYLLQPSPCLGQPRRPRSPSPDHEVAEVVKMVSSESEEMDE
EEMDVVPLSERVEMRVGAEPEPFSLGTGDTGEASGLCDSGDLMASGSEGLQENLAPSGEV
ACDSENGTRSAERFSLCSSPVDSDRPSSPPVSRERPETSLPLKKRQYSQKEREAICQNAW
QRRKEQGAKRRKQEEEKERKRAVAKMLKAQRPGECQKYITVVLDPVILQVEGGEQILSAL
QAANYSCVFENQAVPCSITWRRKTVSSQMGGGDEWTEEPNVLVLLGLEEFLSMARSYKQN
IDGCAERQETLQSYVAHMMEKMPGRILALAVVGVENYFRSLQVQPKQRLRQAAASGNQEK
RAERRKKEVKDSGLDLSRMDVKEALVDLQLSTQVQINIFESNEELGEYATIFTKAVAEAP
YKRERDNAGFSFYLEKSCSGGVKVDPSGKGLLKVWKRQIQQFNRVSSEMAEAIVSAYPSP
QLLIQAYERCSSEQERENMLSNIPVHRGEGVTATSRRIGPELSRRIYLQMTSHNPDLCLD
FTG
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcggggattgagtcgggatctgagagcagcgaggaggacagcttgccctccttcgcc
tacctgctgcaaccgtccccatgcctcggccagccgaggcgcccgcgatcgccatctcct
gatcatgaagtggcagaggttgtcaagatggtgagcagcgagagcgaagagatggatgaa
gaggagatggacgtcgtccctttgagtgagagggtcgagatgagggtgggagcggagcct
gagcctttcagcctgggcactggcgatacaggagaggcatctgggctttgtgatagtggt
gacctgatggcttctgggagcgaagggctgcaggaaaacctggcgccgtctggagaagtg
gcttgcgacagtgagaatggtacacgcagtgctgagagattctccctgtgctcctcgcca
gtcgactcagacaggcctagtagccccccagtaagcagagaaaggccagaaacatcactc
cctctcaagaagcgacagtatagtcagaaggaacgggaggcaatctgccagaatgcgtgg
cagagaaggaaggagcaaggagcaaagaggaggaagcaggaggaggagaaagagaggaag
agagctgttgctaagatgctgaaagctcagcggccaggagagtgccagaaatacataaca
gtggtgctagatccagtcatcttacaggtagaaggtggagaacagatccttagtgctttg
caggctgccaattattcctgtgtgtttgaaaaccaagctgttccttgcagcatcacctgg
aggagaaagacagtgtcatcacagatgggaggaggagatgaatggacagaagaaccaaat
gtccttgttctgcttggcttggaggagtttttgtccatggctcgcagctacaagcaaaac
attgacggctgtgcagaaaggcaggagaccctgcagagctatgtagctcatatgatggag
aaaatgcctgggagaattctggctctggcagtagttggagtagaaaattatttcaggtct
ctccaagttcagccaaaacaaaggctgcgacaggcagcagcgagtgggaatcaagagaaa
cgagcagaaaggagaaaaaaggaggttaaggattctggcctggacttatccagaatggat
gtgaaagaagccctggtggatctgcagctgagcacacaagtccaaataaacatttttgag
agcaatgaggagcttggggaatatgccactattttcacaaaagctgtggctgaggcacca
tacaagcgagagcgagacaatgcagggttctctttctacttggagaagagctgttctgga
ggagtgaaggtggatccttctggaaagggtctcttgaaagtttggaagaggcagatacag
caatttaaccgtgtcagctctgagatggctgaggctatagtgtctgcttacccttctcct
cagcttctgatccaggcctatgagagatgctcctcggagcaggagcgggagaacatgctg
tccaacatccctgtgcaccgtggggagggggtgacagccacctcccggcgcatcgggccc
gagctgtcccgacgcatctacctgcagatgacttcccacaatcctgacctctgtctggat
ttcactggctag
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