Cinclus cinclus (white-throated dipper): 134052149
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Entry
134052149 CDS
T10813
Symbol
USH1G
Name
(RefSeq) pre-mRNA splicing regulator USH1G
KO
K21878
Usher syndrome type-1G protein
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
134052149 (USH1G)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccic03037
]
134052149 (USH1G)
Cilium and associated proteins [BR:
ccic03037
]
Primary cilia and associated proteins
USH complex and associated proteins
134052149 (USH1G)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
SAM_1
SAM_7
Motif
Other DBs
NCBI-GeneID:
134052149
NCBI-ProteinID:
XP_062362407
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All DBs
Position
20:6332879..6341663
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AA seq
469 aa
AA seq
DB search
MNDQYHRAARDGYLDLLKEATKKDLNSPDEDGMTPTLWAAYHGNLDALRLIVSRGGDPDK
CDIWGNTPLHLAAANGHLNCLSFLISFGANIWCLDNDYHTPLDMAAMKGHMECVRYLDSI
AAKQSSLNPKLVSKLKDKAFRDAERRIKDCVKLQKKHHERMEKRYRKEMSDNSDTMSFSS
YSSSTLSKKFQHMSMVTSLPYSQATIHGTAKGKTKIQKKLEKKKQVDGTFKIYEDGRKSV
RSLSGLQLGSDVMFVKQGTYASPKEWTRRNIRDMFLTDEDAVSRAISDPGLHMDSAHSEV
STDSGHDSLFNRPGLGTMVFRRNYVSSGLFGIGREDGGELGEDSADGMGVKLRSRLQRSP
SLNDSIGSANSLQERNAEELPWDEVELGLDDDDEPDTSPLETFLASLHMFEFISILKKEK
IDLEALMLCSDNDLKSINIPLGPRKKIVDAIQRRRQTLEKPDVIADTEL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaccagtaccaccgagccgcccgggacggctacctggatctgctgaaggaagcc
accaagaaggacctgaactctccggatgaggatggcatgaccccgacactatgggctgcc
taccacggcaacctggacgccctgcggctcatcgtcagcagagggggcgatccagacaag
tgtgacatctgggggaacacccccctccacctggcagcagccaacggccacctgaactgc
ctttccttcctcatctcctttggggccaacatctggtgcctggacaatgactaccacacc
ccactggacatggcagccatgaaggggcacatggagtgtgtgcggtacctggactcgatt
gctgccaagcagagcagcctcaaccccaagctggtgagcaaactgaaggacaaggccttt
cgggacgcggagcggaggattaaggactgtgtgaagctgcagaagaagcaccatgaaagg
atggagaaacggtacagaaaggagatgtcagataattcagataccatgagcttttccagc
tattcaagcagcaccttaagcaagaagttccagcacatgtctatggtgacttccctgcca
tactcacaagccaccatccacggcacagccaagggaaagaccaaaatacaaaagaaatta
gagaagaagaagcaggtggacggaacattcaagatctacgaggatgggaggaaaagcgtg
cggtctctgtctggtctgcagctgggcagcgacgtcatgtttgtgaagcagggcacctac
gccagccccaaggagtggactcgccgcaatatccgagacatgttcctcacggatgaagac
gctgtctcccgtgccataagcgacccaggtttgcacatggactcggcccactcggaggtc
agcactgactccggacacgactccttgttcaaccgccccgggctgggcaccatggtattc
cggcgcaactacgtcagcagcgggctctttgggatcggccgggaggacgggggagagctg
ggggaggacagcgccgacgggatgggcgtcaaactgcggagccgcctgcagcgctcgcca
agtctcaacgacagcattggcagtgccaacagcctgcaggagaggaacgcggaggagctg
ccctgggatgaggtggagctgggcttagatgatgatgatgaaccagacaccagccccttg
gaaacttttctggcttccctgcacatgtttgagttcatctccatcctgaagaaggaaaag
attgacttggaggccctcatgctctgttcagacaatgacctgaagagcatcaatatccca
ttgggccccaggaagaagattgtggatgccatccagaggagacgacaaacgctggagaag
ccagatgtcattgcagacactgaactgtaa
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