Cinclus cinclus (white-throated dipper): 134052256
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Entry
134052256 CDS
T10813
Symbol
ITGB2
Name
(RefSeq) integrin beta-2 isoform X1
KO
K06464
integrin beta 2
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04145
Phagosome
ccic04514
Cell adhesion molecule (CAM) interaction
ccic04517
IgSF CAM signaling
ccic04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
134052256 (ITGB2)
04517 IgSF CAM signaling
134052256 (ITGB2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
134052256 (ITGB2)
09142 Cell motility
04810 Regulation of actin cytoskeleton
134052256 (ITGB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134052256 (ITGB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccic04147
]
134052256 (ITGB2)
04515 Cell adhesion molecules [BR:
ccic04515
]
134052256 (ITGB2)
04090 CD molecules [BR:
ccic04090
]
134052256 (ITGB2)
Membrane trafficking [BR:
ccic04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
134052256 (ITGB2)
Exosome [BR:
ccic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134052256 (ITGB2)
Cell adhesion molecules [BR:
ccic04515
]
Integrins
Integrin beta subunits
134052256 (ITGB2)
CD molecules [BR:
ccic04090
]
Proteins
134052256 (ITGB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
SLT_beta
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
134052256
NCBI-ProteinID:
XP_062362588
LinkDB
All DBs
Position
21:4412174..4420127
Genome browser
AA seq
782 aa
AA seq
DB search
MLFVLQKMPRDCCLHLPAVTWVLLLVTTAFAMECPKIKVGICKDCIRSGPGCAWCKKLNF
TKAGEPDSIRCDTVEQLKQRGCPDSETVFPLNDIEKTRDHPLDSKTQLTPQEVHLKLRIG
QPAVFEVKFRRAMGYPIDLYYLMDLSYSMLDDLENVKKLGGELLRALESTTPSRRIGFGS
FVDKTVLPFVNTHPEKLKNPCPNKDKKCQPPFAFKHILSLTDNAKQFENEVGKQFISGNL
DAPEGGLDAMMQAAVCGDLIGWRNVTRLLVFATDDGFHFAGDGKLAGILTPNDGQCHLED
NMYKRSNEFDYPSVGQLVQKLAENNIQPIFAVTSRVVDVYKKLSEMIPKSAVGELNEDSS
NIIELIQVAYNNLSSRIILDHSTLLDTLNVKYDSKCKNDKDSVDDARGQCDNVKINDEVT
FKVKVTAKECISNYSFTIRPLGFTDTLTVHVASICDCHCNDQPNPAACSGQGITECGICS
CNSRYTGKNCECDTKGKSSKELEHSCRRDNSSLICSGQGDCVCGRCACHTSDTPGKYIYG
TYCECDNMNCEFFNGSLCGGPARGQCDCGACRCLPGYEGSACQCQQSTEGCSLNSRSVCS
LRGTCHCNRCQCQAGYQPPFCQECPGCPSPCGKYISCVECKFFNSGPFEKNCSQACPNIH
LRMNSTEESTNDRKCREKDSQNCWMSFHMVQEDGQDMYTIIVNPDRECPEPPNVPLIVGG
TVAGVFLIGVLVLVIWRLLMELLDRREYRRFEKEKTKAKWNDADNPLFKSATTTVVNPRF
ND
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgctttttgtcctgcagaaaatgcctcgtgactgctgcctccacctgccagcagtgacc
tgggtgctgctgctagtgacaacagcctttgccatggagtgccccaagatcaaggtgggc
atttgcaaggactgcattcggtctggtcctggctgtgcctggtgcaagaagctgaatttc
accaaagctggtgagccagactccatccgctgtgacaccgtggagcagctgaagcagagg
ggatgccctgatagtgagactgtgtttccactaaatgacattgaaaaaacacgggaccac
cccttagacagcaagacacagctgactccacaagaggtgcacctgaagctgaggataggc
cagcctgctgtgtttgaggtgaagtttcgccgtgccatggggtatcccattgacctctac
taccttatggacctctcctactccatgctggatgacctggagaacgtgaagaagctggga
ggggagctgctcagggcgctggagagcaccaccccttctcggcgcatcgggtttggctcc
tttgtggacaagacagtgctgccttttgtgaacacacaccctgagaagctgaagaacccc
tgccccaacaaggacaagaagtgccagcctcccttcgccttcaagcacattctgtcactg
actgacaacgccaagcagttcgagaatgaagtggggaagcagttcatctccgggaacctg
gatgccccggagggggggctggatgccatgatgcaggcagcagtgtgcggggacctgatt
gggtggcgcaatgtgacccgcttgctggtgtttgctactgatgatggcttccactttgct
ggggatggcaagcttgcgggcatcctgacccccaatgatggccagtgccacttggaggac
aacatgtacaaaaggagcaatgagtttgactacccatctgttggccagctggtccagaaa
cttgccgaaaacaacattcagcccatttttgctgtcaccagtagggtggtggatgtttac
aagaaactcagtgaaatgatcccaaagtcggcggtgggagagctgaatgaggactccagc
aacatcattgaactcatccaagtggcctacaataacctctcctcgcggatcatcttggac
cattccaccttgctggacactctgaatgtcaaatatgactccaaatgcaaaaatgacaag
gactccgtggatgatgcaagaggccagtgtgacaatgtcaagatcaatgatgaggtcacc
ttcaaagtgaaggtcacagccaaggagtgcatttcaaactattccttcaccatccggcca
ctgggcttcacagacaccctcactgtccatgtagccagcatctgtgactgccactgcaac
gaccagcccaacccagctgcttgcagtgggcaaggcatcactgagtgtgggatctgcagc
tgcaattcaagatacacagggaagaactgcgagtgtgacaccaaagggaagagcagcaag
gagctggagcacagctgccggagggacaacagctcgctgatctgctcggggcagggggac
tgcgtgtgcgggcgctgtgcctgccacaccagtgacacccctggcaagtacatctatggc
acctactgtgagtgtgacaacatgaactgcgagttcttcaatggctccctctgcggcggc
ccagcacgagggcagtgtgactgcggggcgtgcaggtgcctgcctgggtacgagggcagc
gcctgccagtgccagcaatcgacagagggctgcagcctcaacagccggagtgtgtgcagc
ctccgtgggacctgccactgcaaccgctgccagtgccaggcagggtaccagccccccttc
tgccaggagtgcccgggctgcccttccccctgcggcaaatacatctcctgtgtggagtgc
aagttcttcaacagtggcccctttgagaagaactgttcccaggcctgtcccaacatccat
ctgcgcatgaactcaacagaggagagcacgaatgatagaaaatgcagggaaaaggattcc
cagaactgctggatgtccttccatatggtccaggaggatggccaggatatgtacaccatc
atcgttaatccggatagagaatgcccagagccccccaatgtccccctgattgtgggcggc
accgtggctggcgtgttcctcattggcgtcctggtcctggtcatctggaggctcttgatg
gagctgctggaccgtcgggaatatcgccggtttgagaaggagaagaccaaagccaagtgg
aatgatgctgataatcccctcttcaagagtgccaccaccactgtcgtcaatcccaggttc
aatgactga
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