Cinclus cinclus (white-throated dipper): 134052338
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Entry
134052338 CDS
T10813
Symbol
LSS
Name
(RefSeq) LOW QUALITY PROTEIN: lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic00100
Steroid biosynthesis
ccic01100
Metabolic pathways
Module
ccic_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
134052338 (LSS)
Enzymes [BR:
ccic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
134052338 (LSS)
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
TED_complement
Motif
Other DBs
NCBI-GeneID:
134052338
NCBI-ProteinID:
XP_062362705
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Position
21:4597111..4605154
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AA seq
704 aa
AA seq
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MRFYAALQAEDGHWAGDYGGPLFLLPGLLITCHTAKIQLPEGFRKEMIRYLRSVQLPDGG
WGLHVEDKSTVFGTALNYVALRILGVGPDDPDIVRARVNLHSKGGAVGIPSWGKFWLAVL
NVYSWEGMNTLLPEMCSTFSVATRLLPTWFPAHPSRLWCHCRQVYLPMSYCYAKRLSAEE
DELIRSLRQELYVQDYASIDWPAQRNNVAACDVYTPHSWLLGAAYAIMNVYEAHHSTHLR
QRAVTELYDHIKADDRFTKCISIGPISKTINMLVRWFVEGKDSPAFQEHVSRIPDYLWLG
LDGMKMQGTNGSQLWDTAFAIQAFLEAEAQEMPEFTSCLQNAHGFLQFSQIPENPPDYQK
YYRHMSKGGFPFSTRDCGWIVADCTAEGLKAVMLLQEKCPFIAKPVPAERLFDAVNVLAL
GQIEIVLPMRFXPLPLCLSGQLLSMRNSDGGFATYETKRGGHLLELLNPSEVFGDIMIDY
TYVECTSAVMQALRHFQSQFPEHRTLEIRETLQKGLDFCRKKQRADGSWEGSWGVCFTYG
TWFGLEAFASMQHTYHSGTVCREVAQACQFLISKQMTDGGWGEDFESCEQRAYVQSAESQ
IHNTCWALLGLMAVRYPDISVLERGIKLLMDKQLPNGDWPQENIAGVFNKSCAISYTAYR
NIFPIWTLGRFCRLYPNSPLAGQLPARARPSAEAGQEEQRALSA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgcggttctacgcagcgctgcaggccgaggatgggcactgggcgggcgactacggcggg
ccgctgttcctgctgccgggtctcctcatcacctgccacacggccaaaatccagctgccc
gaggggttcaggaaggagatgatacgctacctgcgctctgtgcagctcccggatggaggc
tggggcttacatgtagaagacaaatcaacagtgtttggtacagccctcaactatgtagcc
ttgaggatcctgggggttggaccagatgaccctgacattgtacgggcccgtgtcaacctg
cacagcaaaggaggtgctgtggggatcccttcctggggcaagttttggctggctgtcttg
aacgtttacagctgggagggaatgaacacgcttctcccagagatgtgcagcactttctct
gttgcaaccaggctgcttcccacatggtttccagcccatccgtcacggctctggtgtcac
tgccgccaggtttaccttcccatgagttactgctacgctaagcgtttgtcagcagaagag
gatgagcttatacggagcttgcggcaggagctctatgtgcaagactatgccagcatagac
tggccagcacagaggaacaacgtggctgcctgtgatgtgtacaccccacacagctggctg
ctgggtgctgcctacgccatcatgaacgtgtacgaagctcaccacagcactcacctgcgg
cagcgagctgtcacagagctgtacgaccacatcaaggctgatgatagattcaccaagtgc
atcagcatcggcccaatctccaagacaatcaacatgttggttcgatggtttgtggaaggg
aaggactccccagcttttcaggagcatgtttccaggatccctgactatctttggctgggc
cttgatggcatgaagatgcagggcacaaatggatctcagctctgggatactgcttttgcc
atccaagctttcttggaggcagaagcccaggagatgcccgaattcacctcctgcctccag
aatgcccatgggttcctccagttctcccagatcccagagaacccacctgactaccagaaa
tactatcgccatatgagcaagggtggtttccccttcagcacgcgggactgcggctggatt
gtggcagattgcacagcagaggggctgaaggccgttatgctgctgcaggagaagtgtccc
tttatagccaagcctgtgcctgctgaacgcctctttgatgctgtgaatgtgctggctttg
ggccagattgaaatagtactgcccatgaggtttntcccactgcctctctgcttgtctggg
cagttgctgagcatgaggaactcagatggaggctttgccacttacgaaaccaagcgagga
ggccacttactggagctgctgaacccctcggaggtgtttggtgacatcatgattgactac
acgtacgtggaatgcacatcagctgtcatgcaggcactgagacacttccagagccagttc
cctgagcaccgaaccctggagatcagggagactctgcagaagggcctggatttctgtcgc
aagaagcagcgagcggatgggtcctgggaagggagttggggggtttgtttcacctatggc
acctggtttggtctggaggcgtttgccagcatgcagcacacataccacagcgggactgtc
tgccgagaagtggcccaggcctgccaattcctcatctccaagcagatgacagatggaggg
tggggagaggattttgagtcctgcgagcagcgcgcctatgtgcagagtgctgagtcacag
atccacaacacctgttgggccctgcttggcctcatggctgtcaggtaccctgacatcagt
gtgctggaaaggggcattaaactgttgatggataagcagctgcccaacggagactggcct
caggagaacattgctggggtgttcaacaagtcatgtgccatcagttacactgcgtaccgc
aacatcttccccatctggacactggggcggttctgccggctgtatcccaacagccctctg
gctgggcagctgccagccagagccaggccttcagctgaggcagggcaggaggagcagaga
gccctgtctgcttga
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