Cinclus cinclus (white-throated dipper): 134052399
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Entry
134052399 CDS
T10813
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04137
Mitophagy - animal
ccic04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
134052399 (RABGEF1)
04137 Mitophagy - animal
134052399 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134052399 (RABGEF1)
Membrane trafficking [BR:
ccic04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
134052399 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
134052399 (RABGEF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
134052399
NCBI-ProteinID:
XP_062362802
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All DBs
Position
22
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AA seq
539 aa
AA seq
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MNLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEEAYASSQSTQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFTASSRAGAKKAAQEK
TPKQGQLGRERNADNILRDLKEIFTPSWELASPSEALAGKLKAEIQEAKAPSPSIHRQAS
IETDRVSKEFIEFIRTYQKPGQDIYKQCKLFLDTMSHKRDLSIEEQSECAQDFYQNVADR
LQTRWKVPPEKVEKAMDEVEKYIMTRQYKYVFCPETTDDEKKDLAVQKRIRALHWVTPQM
LCVPVSEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAIKITKNEPASA
DDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQ
SLNLSQEDFDRFMTGQTSPKKQESDSFSPDVCLGVKQMCKSLDLLSQLNERQERIVSEAK
KLEKDLIDWTDGITKEVEDIVEKYPLEIKPKSQALAAIDSENVENDKLPPPLQPQVYAG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgaaatcagagcgcagaggaatccacgtggatcagtcagagctgctgtgcaag
aagggctgtggttactatggaaatcctgcttggcaggggttctgctccaagtgctggagg
gaggaataccacaaggccaggcagaagcagattcaggaggattgggagctggcagagagg
ctccagcgtgaggaggaagaagcctatgccagcagccagagcacccaaggggcacagtcc
ctgactttttcaaagtttgaggagaagaaaaccaatgagaaaacaagaaaggtcactact
gtcaagaagtttttcactgcttcctccagagcaggagctaagaaggcagctcaagagaaa
acccctaagcaaggacagcttgggagggaaagaaatgctgataacattctcagggatttg
aaggagatttttactccctcctgggaactggcttccccttctgaagcgttggctggcaag
ctgaaagcagagatccaggaggccaaagctcccagcccttccatccacaggcaggccagc
attgagacagacagagtgtccaaggagttcatagaattcatcaggacataccagaagcct
ggccaggatatctacaagcaatgcaaactgtttttggacaccatgagtcataaaagggat
ttaagcattgaggaacaatctgagtgtgcccaggacttctaccaaaatgtagcagacagg
ctgcagacacgttggaaagtgccccctgaaaaagtggagaaggcaatggatgaggttgag
aaatacatcatgactcgacagtataaatatgttttttgccctgagacaactgatgatgag
aagaaagaccttgctgtccaaaaaaggatcagggctttgcactgggtgactccccagatg
ttgtgtgttcctgtcagtgaggaaatcccagaagtctctgacatggttgtaaaggcaatt
acagacatcattgagatggactccaagcgtgtccctcgggataaactggcctgcatcacc
aaatgcagcaagcacatcttcaatgccatcaaaatcaccaaaaatgagccagcctctgct
gatgacttcttgcccaccctgatttacatcgtgctcaaggggaaccccccacgcctgcag
tccaacatccagtacatcactcgcttctgcaaccccagcaggctgatgactggggaggat
ggatattatttcaccaacctgtgctgtgctgtggccttcattgaaaaactggatgctcag
tctttaaatctgagccaggaagattttgatcgtttcatgactggccagacatctccaaaa
aagcaggaatctgacagtttctcccctgatgtgtgcctgggggtgaagcaaatgtgcaaa
agcttagacctcctctctcagttgaatgagagacaggaaagaattgtcagtgaagccaag
aagctggagaaggacctcattgattggactgatggcatcaccaaggaggtggaagacatt
gtggagaaatatcccttagagataaaaccaaaaagccaagccttagcagccattgactct
gaaaatgtggagaatgacaagctgcccccaccactgcagcctcaggtttatgcaggataa
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