Cinclus cinclus (white-throated dipper): 134052406
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Entry
134052406 CDS
T10813
Symbol
ITGB1
Name
(RefSeq) integrin beta-1
KO
K05719
integrin beta 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03271
Virion - Rotavirus
ccic04145
Phagosome
ccic04510
Focal adhesion
ccic04512
ECM-receptor interaction
ccic04514
Cell adhesion molecules
ccic04530
Tight junction
ccic04810
Regulation of actin cytoskeleton
ccic04820
Cytoskeleton in muscle cells
ccic05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
134052406 (ITGB1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134052406 (ITGB1)
04514 Cell adhesion molecules
134052406 (ITGB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
134052406 (ITGB1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
134052406 (ITGB1)
04530 Tight junction
134052406 (ITGB1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
134052406 (ITGB1)
04810 Regulation of actin cytoskeleton
134052406 (ITGB1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
134052406 (ITGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134052406 (ITGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccic04147
]
134052406 (ITGB1)
04515 Cell adhesion molecules [BR:
ccic04515
]
134052406 (ITGB1)
04090 CD molecules [BR:
ccic04090
]
134052406 (ITGB1)
Membrane trafficking [BR:
ccic04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
134052406 (ITGB1)
Exosome [BR:
ccic04147
]
Exosomal proteins
Proteins found in most exosomes
134052406 (ITGB1)
Cell adhesion molecules [BR:
ccic04515
]
Integrins
Integrin beta subunits
134052406 (ITGB1)
CD molecules [BR:
ccic04090
]
Proteins
134052406 (ITGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
134052406
NCBI-ProteinID:
XP_062362821
LinkDB
All DBs
Position
1:13864256..13906864
Genome browser
AA seq
803 aa
AA seq
DB search
MAETNFKLLMCAGILCCLIWNAFAQQGGSDCIKANAKSCGECIQAGPNCGWCKKTDFLQE
GEPTSARCDDLAALKSKGCPMEDIENPRGSKQLLENREVTNRKKGAAEKLKPEAITQIQP
QKLSLHLRVGEPQTFSLTFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTALMLEMEKI
TSDFRIGFGSFVEKTVMPYISTTPAKLRNPCTGDQNCTSPFSYKNVLSLTSEGNKFNELV
GKQHISGNLDSPEGGFDAIMQVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLP
NDGKCHLENNVYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQAVYKELKNLIPKSA
VGTLSSNSSNVIQLIIDAYNSLSSEVILENTKLPKGVTISYKSFCKNGVNGTQEDGRKCS
NISIGDEVTFEINITANECPKKEQNETIKIKPLGFTEEVEINLQFICECQCQSEGEPNSP
ACHAGNGTFECGACRCNEGRIGRLCECSTDEVNSEDMDAYCRRENSTEICSNNGECICGQ
CVCKKRENTNEVYSGKYCECDNFNCDRSNGLICGGNGICKCRVCECFPNFTGSACDCSLD
TTPCMASNGQICNGRGTCECGTCNCTDPKFQGPTCETCQTCLGVCTEHKDCIQCRAFDKG
EKKETCSQECMYFNMTRVESRDKLPQPNQPDPLSHCKEKDVDDCWFYFTYSVNSNGEVNV
HVVETPECPSGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKW
DTGENPIYKSAVTTVVNPKYEGK
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggccgagactaatttcaaattgctcatgtgtgctggcatcctctgttgcttgatatgg
aatgcatttgcccagcaaggtggaagcgactgcataaaagctaatgcaaagtcatgtggg
gaatgtatacaagcaggaccaaactgtggctggtgtaaaaaaacagactttttgcaagaa
ggagagccaacatctgcccggtgtgatgacttggcagcactgaagagtaaaggctgccct
atggaagatatagaaaatcccagaggcagcaaacagttgctcgaaaacagagaagtaaca
aatcgtaagaaaggtgctgcagagaagctgaaaccagaagccattacacagatccagcca
cagaaattatcactgcatctaagagtcggagagccccagacattttcattaacattcaag
agagctgaagactaccccattgatctttattatcttatggacctctcctattctatgaaa
gacgatttagagaatgtgaaaagtcttggaacagctctaatgttagagatggaaaaaata
acttcagactttcggattggctttggctcttttgtggagaaaactgtgatgccgtatata
agtacaacaccagccaaactcagaaatccttgtacgggcgaccagaactgtacaagtcca
tttagctataaaaatgtgctcagccttaccagtgaaggaaacaaattcaatgaacttgta
ggtaaacagcacatttctgggaacttagattctcctgaaggtggatttgatgcaataatg
caggttgcagtttgtggggaacaaattggctggaggaatgttacaagactattagtgttt
tccacggatgctggattccactttgcaggagatggtaaacttggtggaattgttctgcca
aatgatgggaaatgtcacctggaaaacaatgtgtacacaatgagccactattatgattat
ccctctattgcacatctggtacaaaaacttagtgagaacaatattcagacaatctttgct
gttaccgaagagtttcaggcagtctataaggaactgaaaaatctgataccaaaatcagca
gttggaacattgtcttcaaattccagcaatgtgattcagctgatcattgatgcatacaat
tccctttcttcagaggtcatcctggaaaatactaagctaccaaaaggagtgacaatcagt
tacaagtctttctgcaagaatggagtgaatggcacacaagaagatggaaggaagtgttct
aacatttcaattggagatgaggttacatttgagattaatataacagctaatgaatgtcca
aagaaagaacaaaatgaaacaattaaaattaaaccactgggattcactgaagaagtggaa
attaatctccagttcatctgtgagtgtcagtgtcaaagtgaaggagaacctaatagtcca
gcctgccatgcaggaaatggaactttcgaatgtggtgcgtgcagatgtaatgaaggacgc
attggaagactctgtgaatgtagcacagatgaagtaaatagtgaggatatggatgcttac
tgcaggagggagaacagcacagaaatctgcagcaacaatggagaatgcatttgtggacaa
tgtgtgtgcaagaaaagggagaacaccaatgaagtgtattctggcaaatactgtgaatgt
gacaacttcaactgtgatcgatcaaatggtttaatctgtggaggaaacgggatctgcaag
tgcagagtgtgtgagtgtttccccaacttcactggcagcgcctgcgattgttccttggat
actacaccgtgtatggcatctaatgggcagatttgcaatggaagaggaacctgtgaatgt
ggcacctgtaactgtacagatcccaaattccaaggccccacgtgcgaaacgtgtcagact
tgcctcggtgtctgtacagagcacaaggactgcattcagtgcagagctttcgacaaggga
gagaagaaggagacgtgttcccaggaatgcatgtatttcaacatgacacgcgtggagagc
cgggacaagctgccacagcccaaccagcctgatcccctgtctcactgcaaagagaaggat
gtggatgactgctggttctacttcacttactctgtcaactcaaatggtgaagtcaatgtc
cacgtggtggagaccccagagtgccccagtggtcctgacatcattcccattgtagctggt
gtggttgctggaattgttcttattggacttgcattattattgatttggaaactactaatg
atcattcatgacaggagagaatttgctaaatttgaaaaggagaagatgaatgccaagtgg
gatacgggtgaaaatcctatttacaagagtgcagtgacaactgtggtcaatcctaaatat
gagggaaaatga
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integrated database retrieval system
