Cinclus cinclus (white-throated dipper): 134052426
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Entry
134052426 CDS
T10813
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134052426 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccic04040
]
134052426 (TRPV1)
Ion channels [BR:
ccic04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
134052426 (TRPV1)
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GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_5
Ank_4
PKD_channel
Motif
Other DBs
NCBI-GeneID:
134052426
NCBI-ProteinID:
XP_062362845
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Position
22:complement(3415559..3423966)
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AA seq
844 aa
AA seq
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MSSILGKMKKFGSFDMEESEVTDEHTDGEDSVQETPDNPQGPPCTKVQPPKSNIFARRGR
FVMGDSDKDMAPMDSFCQMDHLMAPSVIKFHVNLERGKLHKLLSTDSITGCSEKAFKFYD
RRRIFDAVAQGNTKDLSDLLLYLNRTFKHLTDEEFKEPETGKTCLLKAMLNLHDGKNDTI
PLLLDIARKTGTLKEFVNAEYTDNYYKGQTALHIAIERRNMYLVKLLVQNGADVHARACG
EFFRKIKGKSGFYFGELPLSLAACTNQLCIVKFLLENPYQAANIAAEDSMGNMVLHTLVE
IADNTKDNTKFVTKMYNNILILGAKINPILKLEELTNKKGLTPLTLAAKTGKIGIFAYIL
RREIKDPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEILAYSSETPNRHEMLL
VEPLNRLLQDKWDRFVKHLFYFNFFVYTIHITILTAAAYYRPVQKNEKPPFTFGYSTGEY
FRVTGEILSVLGGLYFFFRGIQYFVQRRPSLRTLIVDGYSEVLFFVHSLLLLSSVVLYFC
GQELYVASMVFSLALGWANMLYYTRGFQQMGIYSVMIAKMILRDLCRFMFVYLVFLLGFS
TAVVTLIEDDNEGQETNVSDYARCCHVKRGRTSYNSLYYTCLELFKFTIGMGDLEFTENY
RFKSVFVILLVLYVILTYILLLNMLIALMGETVNKIAQESKSIWKLQRAITILDIENSYL
NCLRHSFRSGKQVLVGITPDGQDDYRWCFRVDEVNWSTWNTNLGIINEDPGYSGDLRRNP
SFSIKPGRVSGKHWKTLVPLLKDGEKRREEPHKLPEEVKLKPVLEPYFEPEDSEVLKESI
PKSV
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccattcttgggaagatgaagaagtttggcagttttgacatggaggaatctgaa
gtgacagatgaacacacggatggggaggactctgtccaggaaacccctgacaacccccag
ggcccaccctgcaccaaggtgcagccacccaaaagcaacatttttgcaagacggggccgc
tttgtgatgggggacagtgacaaggacatggctcccatggactccttctgccagatggat
cacctgatggcaccttctgtcatcaaattccatgtgaatttggagaggggcaaacttcac
aagcttctatctacagattccatcacaggctgctcagaaaaagctttcaaattttatgac
cgcagaaggatctttgatgctgtagcccaaggcaacacaaaggacctcagtgacctgcta
ctttaccttaatagaaccttcaagcatctcacagatgaggagttcaaagagcctgaaact
ggcaaaacctgtttactgaaagccatgctgaatctacatgatgggaaaaatgataccatt
cccttgctactggatattgcaagaaagactggaactctgaaggagtttgttaatgcagaa
tatactgacaactattacaagggccagactgctcttcacattgccatcgagaggaggaac
atgtacctggtgaagctcctggtccagaatggagcagatgttcatgccagagcctgtggg
gagttcttcaggaaaatcaaagggaaatctggcttttattttggagagctgcctttgtcc
ctggctgcctgcaccaaccagctctgcattgtgaaattcctcctggagaatccttaccaa
gcagccaacattgctgctgaggactccatgggcaacatggtcctgcacacactggtggag
attgcagataacaccaaggataacaccaagtttgtaaccaagatgtataataacatattg
atccttggtgccaaaattaatcccatcctcaagctggaagaactcaccaacaagaaaggg
ctgactcctttaactctggcagccaaaacagggaagatagggattttcgcttacatcctc
agacgggagatcaaagatcccgagtgcagacacttgtccaggaagttcactgaatgggcc
tatggacctgtccactcctctctttatgacctgtcctgtatagacacctgtgagaaaaat
tcagtgcttgagatccttgcctacagcagtgagacaccaaaccgtcatgagatgctgctg
gtggaaccccttaacaggctgctgcaagacaagtgggaccggtttgtcaagcacttgttt
tacttcaacttctttgtctacaccatacatatcaccatcctcactgctgctgcttactac
aggcctgtacagaagaatgaaaagcctcctttcacctttggttacagcactggggaatat
tttcgagtaactggagagatcctgagtgtactggggggcctctatttttttttcagaggg
atccagtatttcgtgcagaggcgcccatcactcaggacactgatagttgatggctacagt
gaggttcttttctttgtccactccctgctcctgctgagctctgtggtgctctacttctgt
ggccaggagctctatgtggcatccatggtgttctccttggccctgggctgggccaacatg
ctttactacacccggggcttccagcagatgggaatttactccgtcatgatcgccaagatg
atccttcgagatttatgtcgtttcatgtttgtctatcttgtattcctcttgggattttct
acagctgtggtgactttgattgaagatgacaacgaggggcaggaaacaaatgtctctgac
tatgcccggtgctgccacgtgaaacgaggccgcacctcctacaacagcctctactacacc
tgcctggagctcttcaagttcaccattggcatgggggacctggagttcacagagaactac
aggttcaaatctgtgtttgtcatcctgctggtgctctatgtcatcctcacttacatcctc
ctgctcaacatgctcattgcactgatgggggagactgtcaacaaaattgcacaggagagc
aagagcatctggaaactccagagagccatcacaatcctggacattgagaacagctacttg
aactgtctgaggcactcattccgctctgggaagcaagtcctggtggggatcacacctgat
ggccaagatgattacagatggtgcttcagggttgatgaagtgaactggtccacgtggaac
actaacctgggcataattaatgaagaccctgggtactctggggacctccgacgaaatccc
agtttctccattaagcctggaagagtttcagggaagcactggaaaacattggttccactt
ctaaaagatggagagaagaggagagaagagcctcacaagctgccagaagaagtcaagtta
aaacctgttttggagccttattttgagccagaagattctgaggtgttgaaagagtcaatt
ccaaagtcagtctaa
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