Cinclus cinclus (white-throated dipper): 134052438
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Entry
134052438 CDS
T10813
Symbol
NCOR1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134052438 (NCOR1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccic01009
]
134052438 (NCOR1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccic03036
]
134052438 (NCOR1)
Protein phosphatases and associated proteins [BR:
ccic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134052438 (NCOR1)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
134052438 (NCOR1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
NCOR1_N
Myb_DNA-bind_6
DUF7952
Motif
Other DBs
NCBI-GeneID:
134052438
NCBI-ProteinID:
XP_062362863
LinkDB
All DBs
Position
22
Genome browser
AA seq
2536 aa
AA seq
DB search
MSSSGYPPNQGAFSTEQSRYPPHSVQYTFPSTRHQQEFAVPDYRSSHLEVTQATQLLQQQ
QQQQQQQLRRRPSLLSEFHPGSDRPQERRTGYEQQFHPGPSQTDHDSLESKRPRLEQVSD
SHFQRVSAATVLPLVHPLQEGLRSADIKKDPAFGGKHEGPSSPISGQPCGEDQNASPSKL
SKEELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPERPVSPPPVEQKHRSIV
QIIYDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHENIKTNQVMRKKLILFFKRR
NHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQREQQ
ERFQRVGQRGAGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDAEQRRVK
FINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKEKFVQHPKNFGLIASYLERKNVPDCVL
YYYLTKKNENYKALVRRNYGKRRGRNQQQIARPSQEEKVEEKVEEEKSDKSEKKEEEKKD
EEEKDEKEESKENTKEKDKTEVAPEETEEREQAAPRGRKTANSQGRRKGRITRSMTNEAA
QANAAAAAATEEPPPPLPPPPEPSSTEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAKMV
GTKSEAQCKNFYFNYKRRHNLDSLLQQHKQKSSRRPREERDVSQCESVASTVSAQEDEDI
EASNEEENPEDSEGAENSSDTESAPSPTPAEPAKPTEETPSEPAAPKVTTEAPAEQESAS
KPATSTSPSLPAPSVSTAETQNPEPQVKEEINTEAEEPMEVDSRSHSAEAKPVITLPVHT
KVEPVETEMRLPENIQVKIENDTKEREVEKPKEKSEPEEMDYSLSQQVPTARPESHSDND
SSATCSADEEVDGEPDRQGIYSRESKPSLLNPTGSILVSSTIKQGQMDLQQLHHRAAVIP
PMVSCSPCSVPVGTPVSGYALYQRHIKAMHESALLEEQRQRQEQLDMEYRSAVSPCGTSK
SPSVEWEGKPVAYMPYAEVKRIEQEAQVQNPATRSASPYRLSPREVNKASPQPEMNAARY
SVPPVLQPAPHQVITNIPEGVRLPTTRPTRPPPPLIPSSKTSVPSEKPSFIMGGSISQGT
PGTYLTSHSQASYAQETAKPSVGSISLGLPRQQESAKSVGSLPYIKQEEFSPRSQNSQPE
GLLVRAQHESVVRGTTTIQEGSITRGTPTSKVSVETIPSLRGSITQGTPALSQSGIAADA
LLKGTITRLATEDSSPEKCREEASAKGHVIYEGKSGHILSYDAIKNVREGTRSPRTAHEI
GLKRTYDTMEGNIKQGMSLRESPGSAPLEGLICRALPRGSPHAELKERTVLSGSIMQGTP
RATAESFEEGLKYPKQIKRESPPIRTFEGAITKGKPYDGVTTIKEMGRSIHEIPRQDLLS
QESRKTPEMVQTARPIIEGSISQGTPIKYESNSGQSAIKHNVKSLITGPSKLPRGMPQLE
MVPENVKVVERGKYEDVKTGDAVRSRHTSVVSSGPSVLRSTLHETPKSQLSPGIYDDTNA
RRTPVNYQSPMSRSSPMMNRVSEAGVSSGKPANHERKNTLTPTQRESVPAKSPVPGVDPV
VAHSPFDPHHRGATPEVYRGHLPPHLDPAMPFHRALDPAAAAYLFQRQLSPTPGYPSQYQ
LYAMENTRQTILNDYITSQQMQVNLRPDVTRGLSPREQTLALPYAGARGIIDLNNMAPTI
LVPHPGGTSTPPMERITYIPGTQLTFPPRPYNPASLSPGHPTHLAASAAANAERERERER
EKERERERERERERERERERERERITSVPAELYLRPGAEQPGRPSSHGYVRSPSPSVRSQ
ENILQQRPSIFQGTNGTSVITPLDPAAQLRIMQLTPGAPSITQGLPASRYNTAADALAAL
VDAAASAPQMEVAKAKENKHEGTRIEENMGRRSAVVTDQQQMEQKTLEVEKRPVQCPYTS
ANYSGGKSQGQTSSVVYSEAGKEKGPPPKSRYEEELRTRGKTTITAANFIDVIITRQIAS
DKDARDRGSQSSDSSSSLSSHRYEAPGDAIEVISPANSPVPAQEKLQSYQQEAPKPNQAE
TDPTRPYEGPIHRYRTQQEPPSPQQPPPPSSQAEGMAHVPRTHRLITLADHICQIITQDF
ARNQAASQASLQPPTTTFQNSTPAPTPVSGRAKTSNRYSPEAQSQPVHHQRPGARVSPEN
LSDKARGRPGKSPERSHVSSEPYEPISPPQVPVVHEKQENVLLLSQRTEPTEQRTDSRSP
GSISYLPSFFTKLENTSPMVKSKKQEIFRKLNSSGGGDSDMATAQPGTEIFNLPAVTTSG
AVSSRGHSFADPASNLGLEDIIRKALMGNFDDKSEEHGVVMSQPLAVAQGSSGSAVPASN
ETRREEANPSPNSGGAVNKQKLISKSNSRKSKSPIPGQGYLGTERPSSVSSVHSEGDYHR
QTPVWAWEDRPSSTGSTQFPYNPLTMRMLSSTPPTSITCAPPSMSQATTHPQNRIWEREP
APLLSAQYETLSDSDD
NT seq
7611 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttcaggctaccctccgaaccaaggagctttcagcacggagcagagccggtac
ccgccccactctgtgcagtacaccttccccagcacccgccaccagcaggaatttgctgtt
cccgactatcgctcgtctcacctggaagtcactcaggccacgcagctcctgcagcagcag
cagcagcagcagcagcagcagctccggcgcaggccctccctgctctccgagttccaccca
ggctctgacaggcctcaggaaaggagaactggatatgaacagcagtttcatccaggtcca
tctcagacagatcatgattcactggaatctaagcgaccacgtcttgaacaagtgtctgat
tcccatttccagcgtgtcagtgcagccactgtcttgcctttagtgcatcctctgcaggaa
gggttgagatctgcagatattaagaaggacccagcttttggaggaaagcatgagggacca
tcttctccaatttctggtcagccttgtggggaggaccaaaatgcttcaccttccaagctg
tcaaaggaagaattgatacagagcatggaccgggtagatcgtgaaattgcaaaagtggaa
cagcaaatcctgaaactgaagaaaaagcaacaacaacttgaagaagaagctgctaagcct
cccgagccggagaggccggtgtcccctcctcccgtggagcagaagcaccgcagcatcgtg
cagatcatttacgatgagaatcggaaaaaagcagaagaagctcacaagatttttgaaggt
cttggtccaaaagttgaattgccactttacaaccaaccctcagacaccaaggtctaccat
gaaaacatcaaaacaaaccaggtgatgaggaaaaagctgatcctattctttaaaagaagg
aaccatgcaagaaaacaacgggaacagaaaatctgtcaacgttatgatcagctgatggag
gcatgggagaagaaagtagacaggatagaaaataacccacgaaggaaagccaaggagagc
aaaacacgggagtactacgagaaacaattcccagaaatccggaaacagagagagcagcaa
gaaagattccaaagagttggccaaagaggggctggcctttcagcaaccattgctagaagt
gaacacgagatttcagaaatcatcgatggactctctgagcaggagaataacgagaagcaa
atgcggcagctctctgtcatccctcccatgatgttcgatgcagagcagagaagggtgaaa
ttcatcaacatgaatgggctgatggaagatcccatgaaagtttataaagacaggcagttc
atgaatgtctggacagaccatgagaaggagatttttaaggaaaagtttgtccaacatccc
aagaactttggtctaattgcttcctacttggaacgaaagaatgttcccgactgtgtatta
tattattatttgaccaagaaaaatgaaaactataaagcccttgtgcgaaggaattatggc
aaacgcagaggaagaaaccagcaacagattgctcgtccttctcaagaagaaaaggtagaa
gaaaaggtagaagaggaaaaatcagacaaatcagaaaaaaaagaggaggaaaagaaagat
gaggaggagaaggatgagaaggaggaatctaaagagaataccaaagaaaaggacaaaact
gaagttgcaccagaggaaacagaggaaagggagcaggcagctcctcggggccgaaaaact
gcaaacagccaaggtcggcgtaagggcagaatcaccagatcaatgacaaatgaagctgca
caagcaaatgctgctgcagctgcagccactgaagagccaccaccacctctgccaccccca
ccagaaccttcttctacagagcctgtggagacatcccgctggacagaagaagaaatggaa
gttgctaagaaaggtctagtggaacacgggcgaaactgggcagcaattgccaaaatggtt
gggacgaaaagtgaagctcagtgtaaaaacttctacttcaattacaaaaggaggcacaac
ctggacagtctcctccaacagcacaaacaaaagtcttcgcgaaggccccgagaggagcga
gatgtgtcacagtgtgagagtgtggcttcgactgtgtcagctcaggaggatgaagatatt
gaagcatctaatgaagaagagaacccagaagacagtgaaggtgctgaaaatagttctgat
acagaaagtgctccatctccaactccagcagaacctgctaaaccaactgaagaaactcca
tctgagcctgctgctccaaaagtaaccactgaggccccagcagagcaagaatctgccagt
aaacctgcaaccagcacatctccctccttaccagctccaagtgtatcaacagctgaaact
cagaaccctgagccacaggttaaggaagaaataaacactgaagctgaggagcctatggag
gtggacagcagaagccattcagctgaagctaagcctgtgattactcttccagttcatacc
aaagtagaacctgtagagactgaaatgaggctaccagagaatattcaagtgaaaatagag
aatgataccaaagagagagaggtagagaaacccaaggaaaagtcagaaccggaggaaatg
gactacagcctgtcccagcaagttcctacagccagaccagaatcccattcagataatgac
tccagtgccacctgcagtgctgatgaggaagttgatggagaacctgacagacagggtatc
tacagcagagagtcaaagccctcacttttaaatcccactgggtcaattctggtatcatcc
acgataaagcaagggcagatggacctgcaacagcttcaccacagagctgctgtcatccca
cctatggtttcctgcagcccctgctctgtccctgtgggcaccccagtgagtggttatgct
ctctaccagcggcacatcaaggccatgcacgagtcagccctgctggaggagcagcggcag
cgccaggagcagctggacatggaatatcggagcgctgtgagcccctgtggcacctccaag
agccccagtgtggagtgggaaggaaaaccagtggcctatatgccttatgctgaggtcaag
agaatagaacaggaagcacaagtgcaaaatccagccacaaggtcagcatcaccctacagg
ttatctccaagagaagtcaataaagcctctccccagcctgagatgaatgcagctcgctac
agtgtccctccagttctccagccagcccctcaccaggtgataaccaatattcctgaagga
gttcgcctgcccacaaccagacccaccagaccaccaccaccactcattccatcctccaaa
accagtgtgccatcagaaaaaccttccttcatcatgggaggctcaatctcacaaggaaca
cctggcacttatttaacatcccacagtcaagcttcctatgcccaagaaactgcaaagcca
tcagtgggttctatatcccttgggctaccaaggcagcaagagtcggccaaatctgtaggt
tccttgccctatatcaaacaagaagaattttcacccagaagccagaattcccaacctgag
ggacttctggtcagggcacaacatgaaagtgtggtgcgaggtaccacaacaatacaggag
gggagtataacacgaggaactccaaccagtaaagtttcagttgagaccattccttctttg
agaggctccataactcagggtaccccagctctgtctcagtctggcattgctgctgatgca
ctgctcaagggaaccatcacccggctggctacagaggacagcagcccagagaagtgcagg
gaggaggcctcagccaagggccatgtcatttatgaaggcaaaagtgggcatattctgtct
tatgatgctattaaaaatgtccgtgaaggaacaaggagtccaagaactgctcatgaaatt
ggcttaaagagaacctatgatacaatggaaggaaacataaaacaggggatgtcactgagg
gagtctccagggtctgcaccactggaaggtttaatctgccgagcgctgcctcggggtagc
ccacacgctgaactaaaggagagaacagtcttgtctggctctataatgcaaggcacacca
agagcaacagctgaaagttttgaagaaggcttgaagtaccccaaacagatcaagagagag
tcacctcccatcaggacgtttgaaggagccatcaccaagggcaaaccctacgatggggtc
accaccataaaggagatgggtcgctccatccatgagatcccaaggcaggacctcttaagc
caagagagtcgcaagactcctgaaatggtgcagacagccaggccaatcatagaaggctcc
atatctcagggcacacccataaaatatgaaagcaactctggccagtctgccatcaaacac
aatgtaaaatctttaatcactggaccaagcaagctgccccggggaatgcctcagctggaa
atggtgccagaaaacgtgaaggtggtggaacgaggaaaatacgaagatgtgaagaccggg
gatgccgtgcggtcccgtcacacgtcagtagtcagctctggtccctctgttctcaggtca
acacttcatgaaactcccaaatcacagctgagccctgggatttatgatgatacaaatgct
cggaggacacctgtgaattatcagagtccaatgtccaggagttcacccatgatgaataga
gttagtgaggctggagtatcttctgggaagccagcaaatcatgaaaggaagaacacactc
actccaacacagagggagagtgtgccagcaaagtctccagtgccaggggttgatcctgta
gtggctcacagtccttttgaccctcaccacagaggagcaactcctgaagtctacaggggt
cacctccctccccatttagatcctgctatgccatttcacagggctctggatcctgctgct
gctgcttacctgttccaaaggcagctgtcccccacgccggggtaccccagccagtaccag
ctgtacgccatggagaacacgcgccagaccatcctcaacgactacatcacctcccagcag
atgcaagtgaacctccggcctgatgtcaccaggggattgtcccccagggagcaaacttta
gcactcccttatgcaggagcacgaggaattattgacctgaacaatatggcccccactatc
ttagtgcctcatcctggaggaacgagcaccccacccatggagagaatcacatatatccct
ggcacccagcttaccttccctcccaggccttacaaccctgcttctctgtcaccaggacac
cccacacacctggcagcttctgcagcagcaaatgctgaaagggaacgggaaagggaaagg
gagaaggaacgggaaagggagagggaacgtgaacgagagcgggaaagagaacgagaacgt
gagagggagagaatcacctcagtccctgctgaactttatctccgaccaggtgcagagcag
cctggcagacccagcagtcacggatacgtccggtccccatccccttctgtcagaagccag
gaaaacattctgcagcaaaggccaagtattttccaaggaaccaatgggacaagtgtaatc
acacctttggatcctgctgctcagctacgtatcatgcagctcacccctggagctccctct
atcactcaaggtttgccagcttcccgttacaacactgctgctgatgccctggcagcactc
gtggacgctgcagcctctgctcctcagatggaagttgccaaagcaaaggagaacaagcat
gaaggaaccaggatagaagagaacatgggacgccggtcagctgtggtgactgaccagcag
cagatggagcagaagaccctggaggtagaaaagaggcctgtgcagtgcccctatacatct
gcaaattactctggtggcaagtcccagggacagacttcatcagtagtctattcagaggct
ggtaaagagaaaggacctcctcctaaatccaggtacgaggaagagctgagaactcgagga
aagaccacaattactgctgctaacttcatagatgtgatcatcactcgtcagattgcttca
gacaaggatgctcgagataggggctctcaaagttcagattcttccagtagtttgtcctca
caccggtatgaagctcctggagatgccattgaggtgatcagccctgcaaattcacctgta
cctgctcaagaaaagctacagtcctatcaacaggaggcacccaaaccaaaccaggcagag
actgaccccaccaggccgtacgagggccccattcaccgctacaggacacaacaggagccc
ccctcgccccagcaacctccacctccctcttcccaggcagaggggatggcacatgtgccc
aggacacatcggctcatcacccttgctgatcacatctgtcaaattatcacacaagacttt
gctagaaaccaagcagcttctcaggcctctttgcagcctcccaccactacattccagaat
tccacccctgctccaacgcctgtttctggccgggccaagacctcgaaccgctacagcccc
gaggctcagtcacagcctgtgcaccaccagcggccaggggccagagtgtcccctgagaac
ctctctgacaaggccaggggaaggcctggaaaatctccagagaggagtcatgtctcctca
gagccctatgagccaatctcgccacctcaggtcccggttgtacatgagaagcaggaaaat
gttcttttgctttcccaaagaactgagcctactgaacagaggactgactctcgctctcca
ggcagtatcagttacctgccttcgtttttcaccaaacttgagaacacttcaccaatggta
aaatccaagaaacaggagatatttcgaaagctgaactcatctggtggaggtgactctgac
atggcaactgctcagccagggactgaaatattcaatttgccagcagtcactacctcaggt
gcagtcagttctaggggtcactcctttgcagatcctgccagtaatctaggtctggaagac
attattaggaaagcactgatgggaaactttgatgacaagagtgaggagcacggggtcgtc
atgtcccaacctcttgcagtggctcagggcagctccggctccgcggtaccggccagtaac
gagacacgtagggaagaagccaatccctctccaaattcaggtggggcagtcaacaagcag
aaactcatcagcaagtcaaacagcaggaagtcaaaatctccgattcctgggcagggatat
ttgggaactgaaagaccttcttctgtctcatctgtacattcagaaggggactaccacaga
cagactccagtgtgggcctgggaggacaggccttcatcaacaggttccacccagtttcca
tacaaccctctgaccatgaggatgctgagcagcacccccccgacctccatcacctgtgcc
cccccgtccatgagccaagcaaccactcacccacagaacaggatctgggagcgagagcct
gcaccactgctttcagcacaatatgagactctgtctgacagtgatgactga
DBGET
integrated database retrieval system
