Cinclus cinclus (white-throated dipper): 134052441
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Entry
134052441 CDS
T10813
Symbol
STX1A
Name
(RefSeq) syntaxin-1A
KO
K04560
syntaxin 1A
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
134052441 (STX1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134052441 (STX1A)
Membrane trafficking [BR:
ccic04131
]
SNARE
Syntaxin (Qa)
Stx-PM
134052441 (STX1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
Spectrin_Anc-1
ATG17_like
Prominin
Laminin_II
GNVR
Lzipper-MIP1
ARM_ECM29
Ferritin
DUF5856
YtxH
EcoEI_R_C
PspA_IM30
CC4_CEP85
Med9
ETRAMP
Relaxase_C
DUF16
ANIS5_cation-bd
Translin
Motif
Other DBs
NCBI-GeneID:
134052441
NCBI-ProteinID:
XP_062362872
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Position
22:complement(7895131..>7947832)
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AA seq
284 aa
AA seq
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LSVLLQAKDSDDDDEVTVSVDRDRFMDEFFEQVEEIRGFIDKISENVEEVKRKHSAILAS
PNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQHSTLS
RKFVEVMSEYNATQTDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFSSGIIMD
SNITKQALNEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHSVDYV
ERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTFGGIFG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
ctctctgtgttgttgcaggcaaaggacagtgatgatgatgatgaagtcaccgtcagtgtg
gaccgggatcgtttcatggatgagttctttgagcaggtggaagaaattcgaggcttcatt
gataaaatttcagagaatgtggaagaagtgaaaaggaagcacagcgccattcttgcttca
cccaaccctgatgaaaaaacgaaagaggagctggaggagctgatgtctgacataaagaag
acggcgaacaaagtgcgctccaaactaaagagcattgagcagagcattgaacaagaggaa
ggactgaacaggtcgtcggctgatctgcggataaggaaaactcagcactccacgctgtcc
cgcaagttcgtggaggtgatgtccgagtacaatgccacgcagactgactaccgggagcgc
tgcaagggcaggatccagaggcagctggagatcactggcaggaccaccaccagtgaggag
ctggaggacatgctggagagtggtaacccagccatcttctcctctgggatcatcatggat
tcaaacatcaccaagcaggcgctgaacgagatagagacacggcacagtgagatcatcaaa
ctggagaacagcatccgagagctgcacgacatgttcatggacatggccatgctggtggag
agccagggagaaatgattgaccgcatcgagtacaacgtggagcactcggtggactacgtg
gagcgggccgtgtccgacaccaaaaaagcggtgaagtaccagagcaaagccagacggaag
aagatcatgatcataatctgctgtgtgatcctgggcattgtcatcgcctccaccttcggt
ggcattttcggctag
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